Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0611
(643 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27989| Best HMM Match : Involucrin2 (HMM E-Value=1.2) 48 9e-06
SB_770| Best HMM Match : DUF837 (HMM E-Value=1.4) 36 0.037
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_44266| Best HMM Match : PCI (HMM E-Value=0.047) 33 0.15
SB_55587| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.13) 32 0.46
SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066) 31 0.60
SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 31 1.1
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 31 1.1
SB_59487| Best HMM Match : DUF1014 (HMM E-Value=2.4) 30 1.4
SB_5351| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_53319| Best HMM Match : zf-CW (HMM E-Value=7.7e-17) 29 2.4
SB_49640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6) 29 2.4
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 29 2.4
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 29 2.4
SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022) 29 3.2
SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_56774| Best HMM Match : DNA_pol_viral_N (HMM E-Value=0.41) 29 3.2
SB_39750| Best HMM Match : Borrelia_orfA (HMM E-Value=1.1) 29 3.2
SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_29202| Best HMM Match : SH3_1 (HMM E-Value=3.9e-12) 29 4.2
SB_41695| Best HMM Match : Spectrin (HMM E-Value=0) 28 5.6
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37) 28 7.4
SB_6320| Best HMM Match : Exo_endo_phos (HMM E-Value=4.8) 28 7.4
SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) 28 7.4
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_23874| Best HMM Match : SSIII (HMM E-Value=5.4) 27 9.8
SB_54| Best HMM Match : Actin (HMM E-Value=0) 27 9.8
SB_42147| Best HMM Match : Thioredoxin (HMM E-Value=0.3) 27 9.8
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 27 9.8
SB_4834| Best HMM Match : Coiled (HMM E-Value=8.1) 27 9.8
>SB_27989| Best HMM Match : Involucrin2 (HMM E-Value=1.2)
Length = 192
Score = 47.6 bits (108), Expect = 9e-06
Identities = 19/39 (48%), Positives = 34/39 (87%)
Frame = -3
Query: 119 IMAENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
++AE +K +E+AQ+KLAEERLAM+EE+R +++++ L++
Sbjct: 120 LVAEKDKLLEDAQQKLAEERLAMVEERRTLNQQKADLER 158
>SB_770| Best HMM Match : DUF837 (HMM E-Value=1.4)
Length = 269
Score = 35.5 bits (78), Expect = 0.037
Identities = 17/40 (42%), Positives = 28/40 (70%)
Frame = -3
Query: 122 DIMAENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
+I+ +N K+EE +L EE + M E QR+++EE++KL K
Sbjct: 32 EILERDNGKLEERCDELFEEIVRMKESQREVEEEQEKLFK 71
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -3
Query: 122 DIMAENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLK 6
D + + N++ EE QR+ EE + E+Q + +EE +K K
Sbjct: 4529 DKLRQQNQEFEEEQRRRLEEEMGAFEKQLEEEEEEEKKK 4567
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQK 12
E ++E Q++ EERL EE+RKM+EER++
Sbjct: 1429 EAEMEMERLQKENEEERLRKEEEERKMEEERRR 1461
>SB_44266| Best HMM Match : PCI (HMM E-Value=0.047)
Length = 205
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -3
Query: 122 DIMAENNKKIEEAQRKLAEERLAMIEEQRKMDEERQ 15
+ M E +K E+ +RK EERL E+ RK +EER+
Sbjct: 28 EAMREEQRKREDERRKREEERLEAEEKARKEEEERK 63
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = -3
Query: 89 EAQRKLAEERLAMIEEQRKMDEERQK 12
EA+R+ +ER AM EEQRK ++ER+K
Sbjct: 18 EAERQDRKEREAMREEQRKREDERRK 43
>SB_55587| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.13)
Length = 359
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQK 12
E ++E Q++ EERL +E+RKM+EER++
Sbjct: 243 EAEMEMERLQKENEEERLRKEKEERKMEEERRR 275
>SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066)
Length = 909
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
E N+KIEEA+ K AE + + + ++++EE ++ ++
Sbjct: 540 EENRKIEEAKEKFAELQTRLAKSAKELEEELERKRE 575
>SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1501
Score = 31.1 bits (67), Expect = 0.80
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 122 DIMAENNKKIEEAQRKLAEERLAMIEEQRKMDEERQK 12
D + + + +RKLAEER + EE+R+ DE R++
Sbjct: 1176 DELRRKREDDDRGRRKLAEERRLLEEERRREDERRRE 1212
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = -3
Query: 101 KKIEEAQRKLAEERLAMIEEQRKMDEERQK 12
++I E +R+ EERL EE+R+++EER++
Sbjct: 1054 ERIAEQKRRDDEERLRREEEERRLEEERRR 1083
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQK 12
E +K EE +R+LAE+R E +RK +EE+++
Sbjct: 1096 EEERKREE-ERRLAEQRRVEEERRRKEEEEQRR 1127
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAE---ERLAMIEEQRKMDEERQ 15
E +++EE +R+ E E + +EE+RK +EER+
Sbjct: 1072 EEERRLEEERRREEERKREEVRRLEEERKREEERR 1106
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQK 12
E +++EE +++ E RLA EQR+++EER++
Sbjct: 1090 EEVRRLEEERKREEERRLA---EQRRVEEERRR 1119
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = -3
Query: 110 ENNKKIEEAQ--RKLAEERLAMIEEQRKMDEERQK 12
+ K+IEE + RK AEE+ A EQR+M+EE +K
Sbjct: 313 QEKKRIEEEEQKRKEAEEKKAKEIEQRRMEEEIKK 347
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
E +K+EE +RK E+R E++++ EE +LK+
Sbjct: 418 EEKRKLEEQKRKEEEDRRRKEAEEKRIKEEEARLKE 453
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
E +++EE QRK E++ EEQ++ + E +K K+
Sbjct: 300 ERIERVEEMQRKTQEKKRIEEEEQKRKEAEEKKAKE 335
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQK 12
E +++ EA+RK EE+ + E++RK +E+R++
Sbjct: 404 EEEERLVEARRKEQEEKRKLEEQKRKEEEDRRR 436
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = -3
Query: 101 KKIEEAQRKLAEERLAMIEEQ--RKMDEERQK 12
K+I+E + +L EER + EE+ RK DEER++
Sbjct: 442 KRIKEEEARLKEERRSKDEEENRRKADEERKR 473
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = -3
Query: 110 ENNKK-IEEAQRKLAEERL---AMIEEQRKMDEERQKLKK 3
EN KK I++ RKL EER EE+RK EE +K K+
Sbjct: 618 ENKKKEIDDEMRKLEEERTERDRQKEEERKRREEEEKKKR 657
>SB_59487| Best HMM Match : DUF1014 (HMM E-Value=2.4)
Length = 176
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQK 12
E K++E+ QRK EE+ EEQRK +EE+QK
Sbjct: 7 EEEKQLEK-QRKAEEEKRK--EEQRKAEEEKQK 36
>SB_5351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 870
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Frame = -3
Query: 113 AENNKKIEEAQRKLAEE-----RLAMIEEQRKMDEERQKLKK 3
+EN K +EE +RK EE R +EEQR ++E+R K++K
Sbjct: 415 SENRKTVEEKERKKKEEQEKIKREEELEEQR-LEEQRIKMQK 455
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = -3
Query: 119 IMAENNKKIEEAQRKLAEERLAMIEEQ---RKMDEERQKLK 6
++ E K++EE +R L EE+ M+EE+ R+ EE+QKL+
Sbjct: 276 LLEEEKKRLEELER-LKEEKDKMLEEELKKRETLEEKQKLQ 315
>SB_53319| Best HMM Match : zf-CW (HMM E-Value=7.7e-17)
Length = 714
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -3
Query: 110 ENNKKIE-EAQRKLAEERLAMIEEQRKMDEERQKLKK 3
+ K++E E + +ER A E++R+++ ERQ++KK
Sbjct: 139 KQKKRLEKEGDERKRKEREARAEKERELEMERQRIKK 175
>SB_49640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1177
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -3
Query: 107 NNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLK 6
NN+++E QR++ E+ AMI + ++ +E + LK
Sbjct: 148 NNEELERRQREVEEKEHAMISRENELLQEIESLK 181
>SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6)
Length = 256
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -3
Query: 122 DIMAENNKKIEEAQRKLAEERLAMIEEQRKMDEERQK 12
D + +N K +EE +++L E+ EE+R + ++RQK
Sbjct: 147 DTIHDNEKFLEEQRKRLVEKVKNEGEEERMLHDQRQK 183
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 4/34 (11%)
Frame = -3
Query: 92 EEAQRKLAEE-RLAM---IEEQRKMDEERQKLKK 3
EE RKL EE RLA +EE+RK++EER++ ++
Sbjct: 198 EERMRKLQEEARLAAQRALEEKRKLEEERKEQER 231
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = -3
Query: 116 MAENNKKIEEAQRKLAEER-LAMIEEQRKMDEERQK 12
+AE+ +++EA+R+ AE + EE+R+ EERQ+
Sbjct: 374 VAEHVARLQEAERRRAEAKERERQEEERRKGEERQR 409
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQK 12
E ++ EE ++K EERL + E+++ ++ERQ+
Sbjct: 406 ERQRQEEEKRQKEEEERLRVEAERQREEDERQR 438
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -3
Query: 122 DIMAENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
+++ N+K EE +RKL EE +E R + EE + LK+
Sbjct: 3653 ELIEIENRKWEEERRKLKEEANYANKELRSIQEELRTLKR 3692
>SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022)
Length = 1421
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKL 9
+ +++EE Q + AEE L ++E+R+ E+ +K+
Sbjct: 1249 DEQRRLEEEQIREAEEELRRLQEEREYREQMRKI 1282
>SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1161
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 119 IMAENNKKIEEAQRKLAEERLAMIEEQRKMDEE 21
++ E NKK++ KL+E + QRKM+EE
Sbjct: 726 LLREENKKLQSEIDKLSESLEKSVAVQRKMEEE 758
>SB_56774| Best HMM Match : DNA_pol_viral_N (HMM E-Value=0.41)
Length = 886
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = -3
Query: 95 IEEAQRKLAEERLAMI-EEQRKMDEERQKLKK 3
IE+ +RKL EE+LA + EEQ + + E +K K+
Sbjct: 687 IEKRKRKLEEEKLAKLKEEQARKEAELEKEKQ 718
>SB_39750| Best HMM Match : Borrelia_orfA (HMM E-Value=1.1)
Length = 810
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = -3
Query: 107 NNKKIEEAQRKLAEERLAMIEEQRKMDEERQK 12
N +K E+AQ++ + +L IE RK++EE++K
Sbjct: 5 NAEKEEKAQQEKKKRQLEAIELARKLEEEKKK 36
>SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 692
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -3
Query: 101 KKIEEAQRKLAEERLAMIEEQRKMDEERQKLK 6
K+ EE +RK E RLA EE+++ E +KLK
Sbjct: 91 KQAEERKRKNEERRLA-FEERKRQKEAEEKLK 121
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 116 MAENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
+ + K+++ + K AEER EE+R EER++ K+
Sbjct: 78 LQQRRDKVKQMREKQAEERKRKNEERRLAFEERKRQKE 115
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
E ++ EE +++ EER EE++K +EE +K ++
Sbjct: 450 EEERREEEERKREEEERKQREEEEKKREEEERKQRE 485
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQK 12
E ++ EE +R+ EER EE+++ +EE +K
Sbjct: 443 EEERRREEEERREEEERKREEEERKQREEEEKK 475
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
E ++ EE +++ EER EE+RK E+ ++ K+
Sbjct: 465 ERKQREEEEKKREEEERKQREEEERKQKEKEEEKKR 500
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/31 (48%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Frame = -3
Query: 92 EEAQRKLAEERLAMIEEQRKMDEE-RQKLKK 3
+EA+RK AEE+ IE Q+++DEE ++L+K
Sbjct: 1226 KEAERK-AEEKRKQIERQKRIDEEVERRLQK 1255
>SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 92 EEAQRKLAEERLAMIEEQRKMDEERQK 12
EEAQR+ EE L EE+ + D ER++
Sbjct: 498 EEAQRREEEEALMKREEEERRDAERKR 524
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -3
Query: 89 EAQRKLAEERLAMIEEQRKMDEERQKLKK 3
EA+RK+ EE A + +Q+ ++ER + +K
Sbjct: 525 EAERKIREEEEARLRKQKDEEDERTRREK 553
>SB_29202| Best HMM Match : SH3_1 (HMM E-Value=3.9e-12)
Length = 364
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3
Query: 620 YRAPPRGKRADQK 582
YRAPPRG+RA QK
Sbjct: 18 YRAPPRGRRAHQK 30
>SB_41695| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 2322
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLK 6
E + E ++K EER EE+RK DE+ +K K
Sbjct: 240 EEERAEAELKKKEEEERQRRAEEKRKNDEKEKKKK 274
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/39 (38%), Positives = 29/39 (74%), Gaps = 3/39 (7%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEE--RLAM-IEEQRKMDEERQKLKK 3
++ K++ QR+ A+E ++AM +EE+RK +EE++K +K
Sbjct: 123 KSKKQLLAEQRRRAKEMEQIAMELEEKRKEEEEKEKQRK 161
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 110 ENNKKIE-EAQRKLAEERLAMIEEQRKMDEERQK 12
+ K++E E Q++L EER+ E+RK E QK
Sbjct: 158 KQRKQLEVEKQKRLEEERIRSQNEERKRREREQK 191
>SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37)
Length = 341
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -3
Query: 116 MAENNKKIEEAQRKLAEERLAMIEEQRKMDEERQK-LKK 3
+ ++KK EE +RK EE+ +IE++ K ++ ++ LKK
Sbjct: 221 LKRDSKKKEEEERKAREEKDKLIEKKMKSEQAYEEWLKK 259
>SB_6320| Best HMM Match : Exo_endo_phos (HMM E-Value=4.8)
Length = 845
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 528 RSSKSRKGHILYRRLAVAMHRTIIRTTEKNPKDVAKWM 415
R + + LY+RL V T R T NP+ + WM
Sbjct: 420 RDCRQQYKDALYKRLVVLTALTSCRKTASNPEGIPFWM 457
>SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)
Length = 703
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEE-QRKMDEERQKLKK 3
E KK+EE + L EE EE ++K +EE +K ++
Sbjct: 239 EERKKLEEEEANLMEEERKRKEEAEKKREEEERKRRE 275
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -3
Query: 122 DIMAENNKKIEEAQRKLAEE--RLAMIEEQRKMDEERQKLKK 3
+++ E + ++ +R L EE RL EE+RK EER+K K+
Sbjct: 582 NMIEEVHAVADQKERLLEEEKVRLKEEEEERKKQEERKKAKE 623
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -3
Query: 122 DIMAENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
++M E K+ EEA++K EE ++R+ +E QK KK
Sbjct: 250 NLMEEERKRKEEAEKKREEEE----RKRREEEEAAQKWKK 285
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQK 12
E KK E +L +R +EEQ+K EE++K
Sbjct: 763 EKAKKERERMEQLEIQRQKKVEEQKKKREEKEK 795
>SB_23874| Best HMM Match : SSIII (HMM E-Value=5.4)
Length = 224
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
E ++ EAQ+KL EER EE R+ ++++L +
Sbjct: 39 EERQREAEAQKKLEEERRQQEEEIRRARLQQERLSR 74
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = -3
Query: 104 NKKIEEAQRKLAEERLAMIEEQRKM-DEERQK 12
NK+ +E + +++ ERL EEQ+++ DEE Q+
Sbjct: 1083 NKEQQELESRISLERLRYKEEQQRLRDEEEQQ 1114
>SB_42147| Best HMM Match : Thioredoxin (HMM E-Value=0.3)
Length = 787
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -2
Query: 534 RERSSKSRKGHILYRRLAVAMHRTIIRTTEKNPKDVAKWMKSI 406
R+ + R+ YR + +HR I R T + + +W K+I
Sbjct: 3 RDVKDEKRRSECAYRTSGLEVHRQIFRDTCQKYTKLLEWYKTI 45
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -3
Query: 122 DIMAENNKKI-EEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
D ++ KK+ E + KLAEE ++Q + D+E++KL+K
Sbjct: 514 DAPKKSKKKLTHEEKLKLAEEEKEKKKQQIQEDKEKKKLQK 554
>SB_4834| Best HMM Match : Coiled (HMM E-Value=8.1)
Length = 221
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3
Query: 620 YRAPPRGKRAD 588
YRAPPRG+RAD
Sbjct: 18 YRAPPRGRRAD 28
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,102,692
Number of Sequences: 59808
Number of extensions: 174552
Number of successful extensions: 1203
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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