Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0611
(643 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 33 0.23
L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical pr... 32 0.30
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 32 0.40
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 31 0.70
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 31 0.70
Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical p... 29 2.1
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 29 2.1
Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81525-7|CAE17780.1| 263|Caenorhabditis elegans Hypothetical pr... 29 3.7
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 3.7
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 3.7
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 28 4.9
AC024875-7|AAK29987.2| 97|Caenorhabditis elegans Knl (kinetoch... 28 4.9
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 28 6.5
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 28 6.5
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 28 6.5
U41010-3|AAF98587.1| 655|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 28 6.5
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 27 8.6
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 8.6
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 8.6
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 8.6
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical... 27 8.6
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 27 8.6
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 32.7 bits (71), Expect = 0.23
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -3
Query: 122 DIMAENNKKIEEAQRKLAEERLAMIEEQR-KMDEERQKLKK 3
D E +KK EE +RK AEE+ EE++ K DEER K KK
Sbjct: 141 DKKLEEDKKKEE-KRKEAEEKKKKDEEEKMKKDEERNKRKK 180
>L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical
protein F44E2.3 protein.
Length = 244
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/40 (35%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Frame = -3
Query: 113 AENNKKI---EEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
AE +K+ EE+++K E+RLAM+E++ +++ +R +L +
Sbjct: 175 AELERKVLEAEESRKKFEEDRLAMLEQKSQLERDRAELAR 214
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = -3
Query: 101 KKIEEAQRKLAEERLAMIEEQ---RKMDEERQKLKK 3
K+ E+ +R+ AEE+ A +E+ RKM+EER+K +K
Sbjct: 936 KEAEDKERREAEEKAAAEQEKILRRKMEEEREKAQK 971
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -3
Query: 113 AENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
AE + EE ++K +ER A EE++K EE +KLKK
Sbjct: 106 AERKRLDEERRQKEEQERRARAEEEKKRKEE-EKLKK 141
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = -3
Query: 113 AENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
AE + EE ++K +ER A EE++K EE +KLKK
Sbjct: 106 AERKRLDEERRQKEEQERRARAEEEKKRKEE-EKLKK 141
>Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = -3
Query: 101 KKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
K++E Q +L E+R+ IE Q+KM+EE +K +K
Sbjct: 293 KQLEVLQTELTEQRMK-IEVQKKMEEELRKKEK 324
>Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = -3
Query: 101 KKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
K++E Q +L E+R+ IE Q+KM+EE +K +K
Sbjct: 293 KQLEVLQTELTEQRMK-IEVQKKMEEELRKKEK 324
>Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical
protein T05A10.3 protein.
Length = 406
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/32 (31%), Positives = 23/32 (71%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQ 15
+ + ++ + +R++ EER + EEQ+++DE R+
Sbjct: 221 QEHHEVSDEERRIEEERFRLEEEQKRLDEIRR 252
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/38 (34%), Positives = 28/38 (73%)
Frame = -3
Query: 116 MAENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
+ E K+++E R+L EE L + EE R+++EE++++++
Sbjct: 240 LEEEQKRLDEI-RRLEEESLRL-EEIRRIEEEKKRIEE 275
>Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical
protein F45G2.2b protein.
Length = 390
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = -3
Query: 116 MAENNKKIEEAQRKLAEERLAMIE--EQRKMDEERQKL 9
+ EN+K+ EEA++K A+E A I+ E+ K ER ++
Sbjct: 17 LEENHKREEEARKKYADELRAKIDQYEETKAAHERDRM 54
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = -3
Query: 116 MAENNKKIEEAQRKLAEERLAMIE--EQRKMDEERQKL 9
+ EN+K+ EEA++K A+E A I+ E+ K ER ++
Sbjct: 862 LEENHKREEEARKKYADELRAKIDQYEETKAAHERDRM 899
>Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical
protein D1025.10 protein.
Length = 376
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/41 (34%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = -3
Query: 122 DIMAENNKKIEEAQRKLAEE-RLAMIEEQRKMDEERQKLKK 3
D+M E N+++EE + AEE + ++EE + +EE +++K+
Sbjct: 126 DVMEEINQEVEEEEEGEAEEGQEEVVEEVEEDEEEVEEIKE 166
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/32 (34%), Positives = 23/32 (71%)
Frame = -3
Query: 104 NKKIEEAQRKLAEERLAMIEEQRKMDEERQKL 9
+K EE QR+ AEE+ A ++Q++ + +R+++
Sbjct: 317 SKMNEEEQRRQAEEKEAQAQKQKEFETDRKRI 348
>Z81525-7|CAE17780.1| 263|Caenorhabditis elegans Hypothetical
protein F33A8.10 protein.
Length = 263
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 113 AENNKKIEEAQRKLAEERLAMIEEQRK 33
AE NKKIEE + +++ER +M R+
Sbjct: 164 AEKNKKIEEFMKTMSDERQSMYTNYRR 190
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -3
Query: 101 KKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
+K EEA+RK AE R+ IE R+ EER++ ++
Sbjct: 449 QKAEEARRKEAE-RIEEIERMRQQAEERRRRER 480
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -3
Query: 101 KKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
+K EEA+RK AE R+ IE R+ EER++ ++
Sbjct: 449 QKAEEARRKEAE-RIEEIERMRQQAEERRRRER 480
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -3
Query: 119 IMAENNKKIEEAQRKLAEERLAMIEEQR-KMDEERQKLKK 3
+ AE K +E +R AEE +E+++ K +EE+ K++K
Sbjct: 916 VKAEREKVKKEEERLKAEEEKVKVEKEKVKAEEEKVKVEK 955
>AC024875-7|AAK29987.2| 97|Caenorhabditis elegans Knl (kinetochore
null) bindingprotein protein 4 protein.
Length = 97
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/36 (38%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Frame = -3
Query: 104 NKKIEEAQRKLAE--ERLAMIEEQRKMDEERQKLKK 3
NK+++EA RKL E E+ ++E+Q + +E+ K+K+
Sbjct: 41 NKEMDEADRKLEETLEKRKLVEKQLEDLQEQYKVKE 76
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = -3
Query: 116 MAENNKKIEEA--QRKLAEERLAMIEEQRKMDEERQKLKK 3
M E ++K+EE +RKL E++L ++EQ K+ E L+K
Sbjct: 44 MDEADRKLEETLEKRKLVEKQLEDLQEQYKVKEFAFSLQK 83
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -3
Query: 110 ENNKKIEEAQRKL-AEERLAMIEEQRKMDEERQKLKK 3
E KK EE + +L AEE L + EE+++ E ++ KK
Sbjct: 551 EARKKQEEEEARLKAEEELKIYEEEKRKKELEEERKK 587
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
E KK EE + + + E++ KM+EE++K+K+
Sbjct: 561 ERRKKDEEERIQKENDEKKQKEDEAKMEEEKKKIKE 596
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
E KK EE + + + E++ KM+EE++K+K+
Sbjct: 575 ERRKKDEEERIQKENDEKKQKEDEAKMEEEKKKIKE 610
>U41010-3|AAF98587.1| 655|Caenorhabditis elegans Hypothetical
protein T05A12.3 protein.
Length = 655
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -3
Query: 119 IMAENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
I E + + EAQR+L E+ A E QRK E+ ++L K
Sbjct: 18 IREEVSNEKSEAQRQLEAEKRARQEMQRKKLEKEKELAK 56
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 113 AENNKKIEEAQRKLAEERLAMIEEQRKMD-EERQKLKK 3
AE +K EE + +R+ +EEQRK + E+++K+++
Sbjct: 901 AEEERKREEEKLIAERKRIEEVEEQRKREAEDKEKIEQ 938
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIE--EQRKMDEERQKLKK 3
E +++EE +RK EER E E+R+ EE ++++K
Sbjct: 428 EEEERLEEIRRKKEEERKKKEEEDEKRRKAEESERVRK 465
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 116 MAENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
+AE K EA K A +EEQ+K D E ++K
Sbjct: 9899 LAEKQKLESEAATKKAAAEKLKLEEQKKKDAETASIEK 9936
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 116 MAENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
+AE K EA K A +EEQ+K D E ++K
Sbjct: 9919 LAEKQKLESEAATKKAAAEKLKLEEQKKKDAETASIEK 9956
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 116 MAENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLKK 3
+AE K EA K A +EEQ+K D E ++K
Sbjct: 9919 LAEKQKLESEAATKKAAAEKLKLEEQKKKDAETASIEK 9956
>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
protein Y47D3A.26 protein.
Length = 1205
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 107 NNKKIEEAQRKLAEERLAMIEEQRKMDEERQKLK 6
+ KK+E R L E++ + E+ KM EE+ LK
Sbjct: 274 DKKKLESLGRGLREDKETLQAEETKMVEEKMTLK 307
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 110 ENNKKIEEAQRKLAEERLAMIEEQRKMDEERQKL 9
E +K+ EEA++ L E+ ++E Q +DE ++L
Sbjct: 85 EEDKQSEEARKTLLEKHAEIMETQGVIDESERQL 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,067,856
Number of Sequences: 27780
Number of extensions: 131382
Number of successful extensions: 930
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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