Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0610
         (350 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0AC39 Cluster: TonB family protein; n=1; Alkalilimnico...    31   4.1  
UniRef50_Q9FMD4 Cluster: Similarity to DNA repair protein; n=3; ...    31   4.1  
UniRef50_A5KAN8 Cluster: Lysine decarboxylase, putative; n=1; Pl...    31   5.4  
UniRef50_UPI0000E460B7 Cluster: PREDICTED: hypothetical protein;...    30   9.5  
UniRef50_Q21L54 Cluster: GCN5-related N-acetyltransferase; n=1; ...    30   9.5  
UniRef50_Q4Z1F2 Cluster: Putative uncharacterized protein; n=2; ...    30   9.5  

>UniRef50_Q0AC39 Cluster: TonB family protein; n=1; Alkalilimnicola
           ehrlichei MLHE-1|Rep: TonB family protein -
           Alkalilimnicola ehrlichei (strain MLHE-1)
          Length = 333

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -1

Query: 182 FVCPSLLIHAYIFGMLFASVSIL 114
           +V  S+L+H  IFG+ FA+VS+L
Sbjct: 21  YVAASILLHVLIFGLFFANVSLL 43


>UniRef50_Q9FMD4 Cluster: Similarity to DNA repair protein; n=3;
           core eudicotyledons|Rep: Similarity to DNA repair
           protein - Arabidopsis thaliana (Mouse-ear cress)
          Length = 856

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 160 ISNEGQTKDRFIHTAHGNSKMDSRDLCAMMVFDNDRHYQGQ 282
           ISN     D+ I TA G+ K+DS  LC + V+ N  +  G+
Sbjct: 374 ISNSSSVSDQVISTAFGSKKVDS-PLCWLEVYCNGENMDGK 413


>UniRef50_A5KAN8 Cluster: Lysine decarboxylase, putative; n=1;
           Plasmodium vivax|Rep: Lysine decarboxylase, putative -
           Plasmodium vivax
          Length = 2060

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 160 ISNEGQTKDRFIHTAHGNSKMDSRDLCAMMVFDNDRHYQGQD 285
           +    Q K  F H+AH  S  +SRD    M+  N R   G +
Sbjct: 312 VGGGAQMKPAFTHSAHNGSSSNSRDAMRNMILSNYRGCSGNN 353


>UniRef50_UPI0000E460B7 Cluster: PREDICTED: hypothetical protein;
           n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 1310

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 26  SKGCTKCVIRY*LVTMRLRKY*ESNGASYRESKH*QTTCQRYKHVLVTKDKQRID 190
           SK   +C IR  L+   +RK+    G +  E  + Q+  Q+   VLV    Q++D
Sbjct: 208 SKYSCQCAIRSLLMLPNIRKHFHMQGNTVYEKSYHQSGLQKVTDVLVRNGPQKVD 262


>UniRef50_Q21L54 Cluster: GCN5-related N-acetyltransferase; n=1;
           Saccharophagus degradans 2-40|Rep: GCN5-related
           N-acetyltransferase - Saccharophagus degradans (strain
           2-40 / ATCC 43961 / DSM 17024)
          Length = 163

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +1

Query: 70  NAIAKILRVKRCIISRIETLANNMPKI*ACISNEG 174
           +A+AKI   K C    +E L+NN P I  C  N G
Sbjct: 110 DALAKIAEQKNCCKLTLEVLSNNTPAI-KCYQNNG 143


>UniRef50_Q4Z1F2 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 506

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 266 LSLSNTIIAHKSRESILLLPWAVCINRSFVCPSLLIHAYI 147
           + L N +    S   ILLL WA C+N  F   +LLI  +I
Sbjct: 438 IGLLNFVCGIVSFVRILLLEWAKCVNYDFTYINLLIVGFI 477


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 338,828,287
Number of Sequences: 1657284
Number of extensions: 6207052
Number of successful extensions: 12566
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12564
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)