Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0610
         (350 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ496101-1|ABF47090.1|  286|Homo sapiens cytochrome b reductase ...    28   7.2  
BC065290-1|AAH65290.1|  286|Homo sapiens cytochrome b reductase ...    28   7.2  
AK027115-1|BAB15661.1|  286|Homo sapiens protein ( Homo sapiens ...    28   7.2  
AC007969-1|AAY14730.1|  286|Homo sapiens unknown protein.              28   7.2  
U62583-1|AAB42010.1|  873|Homo sapiens Prt1 homolog protein.           28   9.5  

>DQ496101-1|ABF47090.1|  286|Homo sapiens cytochrome b reductase 1
           protein.
          Length = 286

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = -1

Query: 224 SILLLPWAVCINRSFVCPSLLIHAYIFGMLFASVSILDMMHRLTLNIFAI 75
           S+ LLPWA    R+F+ P   IH Y   ++F +V    +M      IF++
Sbjct: 140 SVFLLPWAPLSLRAFLMP---IHVYSGIVIFGTVIATALMGLTEKLIFSL 186


>BC065290-1|AAH65290.1|  286|Homo sapiens cytochrome b reductase 1
           protein.
          Length = 286

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = -1

Query: 224 SILLLPWAVCINRSFVCPSLLIHAYIFGMLFASVSILDMMHRLTLNIFAI 75
           S+ LLPWA    R+F+ P   IH Y   ++F +V    +M      IF++
Sbjct: 140 SVFLLPWAPLSLRAFLMP---IHVYSGIVIFGTVIATALMGLTEKLIFSL 186


>AK027115-1|BAB15661.1|  286|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23462 fis, clone HSI08475. ).
          Length = 286

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = -1

Query: 224 SILLLPWAVCINRSFVCPSLLIHAYIFGMLFASVSILDMMHRLTLNIFAI 75
           S+ LLPWA    R+F+ P   IH Y   ++F +V    +M      IF++
Sbjct: 140 SVFLLPWAPLSLRAFLTP---IHVYSGIVIFGTVIATALMGLTEKLIFSL 186


>AC007969-1|AAY14730.1|  286|Homo sapiens unknown protein.
          Length = 286

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = -1

Query: 224 SILLLPWAVCINRSFVCPSLLIHAYIFGMLFASVSILDMMHRLTLNIFAI 75
           S+ LLPWA    R+F+ P   IH Y   ++F +V    +M      IF++
Sbjct: 140 SVFLLPWAPLSLRAFLMP---IHVYSGIVIFGTVIATALMGLTEKLIFSL 186


>U62583-1|AAB42010.1|  873|Homo sapiens Prt1 homolog protein.
          Length = 873

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = -2

Query: 337 SRGRPAGYRPALSLVFTHPALDSVCRYQTPSSHI 236
           SRGRPAG R   +      ALD  C +  P  HI
Sbjct: 827 SRGRPAGSRVTPASSLCSLALDCDCAWILPLRHI 860


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,645,073
Number of Sequences: 237096
Number of extensions: 974821
Number of successful extensions: 1466
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1466
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)