Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0610
         (350 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089462-1|AAL90200.1|  406|Drosophila melanogaster AT27166p pro...    27   6.7  
AE014296-3257|AAF49086.2|  406|Drosophila melanogaster CG7570-PA...    27   6.7  
AY071461-1|AAL49083.1|  691|Drosophila melanogaster RE54096p pro...    27   8.9  
AY069263-1|AAL39408.1|  426|Drosophila melanogaster GM06806p pro...    27   8.9  
AE014296-3713|AAF51857.2|  680|Drosophila melanogaster CG7369-PA...    27   8.9  

>AY089462-1|AAL90200.1|  406|Drosophila melanogaster AT27166p
           protein.
          Length = 406

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -2

Query: 316 YRPALSLVFTHPALDSVCRYQTPSSHINLVSPFYYC 209
           YR   SL    PA+  +     PSSH  L  P Y C
Sbjct: 165 YRQESSLAQGAPAMPQIFCLAPPSSHGGLNQPVYLC 200


>AE014296-3257|AAF49086.2|  406|Drosophila melanogaster CG7570-PA
           protein.
          Length = 406

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -2

Query: 316 YRPALSLVFTHPALDSVCRYQTPSSHINLVSPFYYC 209
           YR   SL    PA+  +     PSSH  L  P Y C
Sbjct: 165 YRQESSLAQGAPAMPQIFCLAPPSSHGGLNQPVYLC 200


>AY071461-1|AAL49083.1|  691|Drosophila melanogaster RE54096p
           protein.
          Length = 691

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 67  DNAIAK-ILRVKRCIISRIETLANNMPKI*ACISNEGQTKDRFIHTAHGN 213
           DN++ K + R+ + ++SR+ TL      +    S E Q++ +  H  HG+
Sbjct: 269 DNSLGKQVSRILQLLVSRLTTLEQYEEFLQTISSEEAQSQQQQHHHHHGH 318


>AY069263-1|AAL39408.1|  426|Drosophila melanogaster GM06806p
           protein.
          Length = 426

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 67  DNAIAK-ILRVKRCIISRIETLANNMPKI*ACISNEGQTKDRFIHTAHGN 213
           DN++ K + R+ + ++SR+ TL      +    S E Q++ +  H  HG+
Sbjct: 15  DNSLGKQVSRILQLLVSRLTTLEQYEEFLQTISSEEAQSQQQQHHHHHGH 64


>AE014296-3713|AAF51857.2|  680|Drosophila melanogaster CG7369-PA
           protein.
          Length = 680

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 67  DNAIAK-ILRVKRCIISRIETLANNMPKI*ACISNEGQTKDRFIHTAHGN 213
           DN++ K + R+ + ++SR+ TL      +    S E Q++ +  H  HG+
Sbjct: 269 DNSLGKQVSRILQLLVSRLTTLEQYEEFLQTISSEEAQSQQQQHHHHHGH 318


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,576,874
Number of Sequences: 53049
Number of extensions: 301307
Number of successful extensions: 526
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)