Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0609
         (286 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   1.1  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   2.6  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   3.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   5.9  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       19   7.8  

>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 160 LVSRNITDDVLKFFLEGPVSSS 225
           + S+N+ + +  F+ EGP S +
Sbjct: 344 ITSKNVANKIRDFYYEGPNSEN 365


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 93  PDKSLHQLRTAMHHHPPNQERAVNLSIL 10
           P +S H+L T +  +PPN   AV  S L
Sbjct: 44  PLESNHKLVTFILKNPPNLNPAVQGSSL 71


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 195 ILLRGTGVFEPLQRLSN 245
           ILLR   VFE   RL+N
Sbjct: 398 ILLRFLSVFESCTRLNN 414


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 5.9
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +2

Query: 50  WWCMAVLSWWSDLSG 94
           WW +     W D+SG
Sbjct: 189 WWDVHSTGSWLDMSG 203


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 156 RPRVAQHH*RRIKILLRGTGVF 221
           +P   Q H RR+++ L  +G+F
Sbjct: 139 KPDDNQDHLRRLEMSLEKSGLF 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,622
Number of Sequences: 336
Number of extensions: 1113
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4897022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)