Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0609
(286 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF200715-1|AAF08006.1| 304|Homo sapiens PTB domain adaptor prot... 29 2.7
AF191771-1|AAF18975.1| 304|Homo sapiens CED-6 protein protein. 29 2.7
AC092598-1|AAX93242.1| 171|Homo sapiens unknown protein. 29 2.7
AB209890-1|BAD93127.1| 146|Homo sapiens GULP, engulfment adapto... 29 2.7
EF363480-1|ABM69287.1| 235|Homo sapiens tongue cancer chemother... 29 3.6
D87470-1|BAA13408.1| 291|Homo sapiens KIAA0280 protein. 29 3.6
BC052341-1|AAH52341.1| 235|Homo sapiens KIAA0280 protein. 29 3.6
D86978-1|BAA13214.1| 2013|Homo sapiens KIAA0225 protein. 27 8.3
BC146784-1|AAI46785.1| 2012|Homo sapiens nucleoporin 205kDa prot... 27 8.3
BC094868-1|AAH94868.1| 335|Homo sapiens NUP205 protein protein. 27 8.3
BC073947-1|AAH73947.1| 435|Homo sapiens NUP205 protein protein. 27 8.3
BC063612-1|AAH63612.1| 617|Homo sapiens NUP205 protein protein. 27 8.3
BC044255-1|AAH44255.1| 832|Homo sapiens NUP205 protein protein. 27 8.3
>AF200715-1|AAF08006.1| 304|Homo sapiens PTB domain adaptor protein
CED-6 protein.
Length = 304
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 115 IVSYRELTRQIAPPTKNGHAPPPTESRKS 29
++ + ++ Q + PT+NG PPP SR +
Sbjct: 219 MIPFSPISHQSSMPTRNGTQPPPVPSRST 247
>AF191771-1|AAF18975.1| 304|Homo sapiens CED-6 protein protein.
Length = 304
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 115 IVSYRELTRQIAPPTKNGHAPPPTESRKS 29
++ + ++ Q + PT+NG PPP SR +
Sbjct: 219 MIPFSPISHQSSMPTRNGTQPPPVPSRST 247
>AC092598-1|AAX93242.1| 171|Homo sapiens unknown protein.
Length = 171
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 115 IVSYRELTRQIAPPTKNGHAPPPTESRKS 29
++ + ++ Q + PT+NG PPP SR +
Sbjct: 86 MIPFSPISHQSSMPTRNGTQPPPVPSRST 114
>AB209890-1|BAD93127.1| 146|Homo sapiens GULP, engulfment adaptor
PTB domain containing 1 variant protein.
Length = 146
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 115 IVSYRELTRQIAPPTKNGHAPPPTESRKS 29
++ + ++ Q + PT+NG PPP SR +
Sbjct: 43 MIPFSPISHQSSMPTRNGTQPPPVPSRST 71
>EF363480-1|ABM69287.1| 235|Homo sapiens tongue cancer chemotherapy
resistance-associated protein 1 variant 2 protein.
Length = 235
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Frame = -1
Query: 172 CATRGRAHL------NNEAYLAG*SIVSYRELTRQIAPPTKNGHAPPP 47
C T G HL N Y A + Y T PPT++ APPP
Sbjct: 66 CGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPP 113
>D87470-1|BAA13408.1| 291|Homo sapiens KIAA0280 protein.
Length = 291
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Frame = -1
Query: 172 CATRGRAHL------NNEAYLAG*SIVSYRELTRQIAPPTKNGHAPPP 47
C T G HL N Y A + Y T PPT++ APPP
Sbjct: 122 CGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPP 169
>BC052341-1|AAH52341.1| 235|Homo sapiens KIAA0280 protein.
Length = 235
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Frame = -1
Query: 172 CATRGRAHL------NNEAYLAG*SIVSYRELTRQIAPPTKNGHAPPP 47
C T G HL N Y A + Y T PPT++ APPP
Sbjct: 66 CGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKVPPTQSNTAPPP 113
>D86978-1|BAA13214.1| 2013|Homo sapiens KIAA0225 protein.
Length = 2013
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 109 SYRELTRQIAPPTKNGHAPPPTESRKSC*SVNPSGV 2
SY + RQ +N PP E ++ C SV P+GV
Sbjct: 1829 SYYDSHRQSVSKLQNVEQLPPDEIKELCQSVMPAGV 1864
>BC146784-1|AAI46785.1| 2012|Homo sapiens nucleoporin 205kDa protein.
Length = 2012
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 109 SYRELTRQIAPPTKNGHAPPPTESRKSC*SVNPSGV 2
SY + RQ +N PP E ++ C SV P+GV
Sbjct: 1828 SYYDSHRQSVSKLQNVEQLPPDEIKELCQSVMPAGV 1863
>BC094868-1|AAH94868.1| 335|Homo sapiens NUP205 protein protein.
Length = 335
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 109 SYRELTRQIAPPTKNGHAPPPTESRKSC*SVNPSGV 2
SY + RQ +N PP E ++ C SV P+GV
Sbjct: 151 SYYDSHRQSVSKLQNVEQLPPDEIKELCQSVMPAGV 186
>BC073947-1|AAH73947.1| 435|Homo sapiens NUP205 protein protein.
Length = 435
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 109 SYRELTRQIAPPTKNGHAPPPTESRKSC*SVNPSGV 2
SY + RQ +N PP E ++ C SV P+GV
Sbjct: 251 SYYDSHRQSVSKLQNVEQLPPDEIKELCQSVMPAGV 286
>BC063612-1|AAH63612.1| 617|Homo sapiens NUP205 protein protein.
Length = 617
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 109 SYRELTRQIAPPTKNGHAPPPTESRKSC*SVNPSGV 2
SY + RQ +N PP E ++ C SV P+GV
Sbjct: 433 SYYDSHRQSVSKLQNVEQLPPDEIKELCQSVMPAGV 468
>BC044255-1|AAH44255.1| 832|Homo sapiens NUP205 protein protein.
Length = 832
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 109 SYRELTRQIAPPTKNGHAPPPTESRKSC*SVNPSGV 2
SY + RQ +N PP E ++ C SV P+GV
Sbjct: 648 SYYDSHRQSVSKLQNVEQLPPDEIKELCQSVMPAGV 683
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,781,986
Number of Sequences: 237096
Number of extensions: 831474
Number of successful extensions: 1253
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 76,859,062
effective HSP length: 71
effective length of database: 60,025,246
effective search space used: 1380580658
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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