Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0609
         (286 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2120|AAF48437.1|  984|Drosophila melanogaster CG5877-PA...    31   0.30 
AE014298-2576|AAF48733.1|  577|Drosophila melanogaster CG12432-P...    30   0.40 
BT021420-1|AAX33568.1|  347|Drosophila melanogaster LD03728p pro...    26   6.5  
AF044220-1|AAD02322.1|  347|Drosophila melanogaster HCG-1 protein.     26   6.5  
AF044219-1|AAD02321.1|  347|Drosophila melanogaster HCG-1 protei...    26   6.5  
AE014298-2250|AAS65354.1|  347|Drosophila melanogaster CG9038-PB...    26   6.5  
AE014298-2249|AAF48527.1|  347|Drosophila melanogaster CG9038-PA...    26   6.5  

>AE014298-2120|AAF48437.1|  984|Drosophila melanogaster CG5877-PA,
           isoform A protein.
          Length = 984

 Score = 30.7 bits (66), Expect = 0.30
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 90  DKSLHQLRTAMHHHPPNQE 34
           ++ +H L TAM HHP NQ+
Sbjct: 211 EQQIHSLETAMEHHPSNQQ 229


>AE014298-2576|AAF48733.1|  577|Drosophila melanogaster CG12432-PA
           protein.
          Length = 577

 Score = 30.3 bits (65), Expect = 0.40
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -3

Query: 221 EDTGPSKKNFNTSSVMLRDTRPSTPK*RSLFSRLEYR*LPGINQTNRSTN 72
           ED GP+ +    + +    T  +  K RS +SR  +R LPG + +  S N
Sbjct: 516 EDPGPNHRIAGGNGIQTVQTTATESKARSFWSRKGWRKLPGFSTSTSSIN 565


>BT021420-1|AAX33568.1|  347|Drosophila melanogaster LD03728p
           protein.
          Length = 347

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 78  HQLRTAMHHHPPNQERAVNLSILPVS 1
           HQL    HHH   Q +    S LP S
Sbjct: 113 HQLHQHQHHHQQQQSQQQQQSFLPYS 138


>AF044220-1|AAD02322.1|  347|Drosophila melanogaster HCG-1 protein.
          Length = 347

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 78  HQLRTAMHHHPPNQERAVNLSILPVS 1
           HQL    HHH   Q +    S LP S
Sbjct: 113 HQLHQHQHHHQQQQSQQQQQSFLPYS 138


>AF044219-1|AAD02321.1|  347|Drosophila melanogaster HCG-1 protein
           protein.
          Length = 347

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 78  HQLRTAMHHHPPNQERAVNLSILPVS 1
           HQL    HHH   Q +    S LP S
Sbjct: 113 HQLHQHQHHHQQQQSQQQQQSFLPYS 138


>AE014298-2250|AAS65354.1|  347|Drosophila melanogaster CG9038-PB,
           isoform B protein.
          Length = 347

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 78  HQLRTAMHHHPPNQERAVNLSILPVS 1
           HQL    HHH   Q +    S LP S
Sbjct: 113 HQLHQHQHHHQQQQSQQQQQSFLPYS 138


>AE014298-2249|AAF48527.1|  347|Drosophila melanogaster CG9038-PA,
           isoform A protein.
          Length = 347

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 78  HQLRTAMHHHPPNQERAVNLSILPVS 1
           HQL    HHH   Q +    S LP S
Sbjct: 113 HQLHQHQHHHQQQQSQQQQQSFLPYS 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,951,919
Number of Sequences: 53049
Number of extensions: 249316
Number of successful extensions: 677
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 465714480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)