Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0609
         (286 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81073-1|CAB03029.1|  645|Caenorhabditis elegans Hypothetical pr...    26   3.8  
Z79695-2|CAB01971.2| 1008|Caenorhabditis elegans Hypothetical pr...    26   5.0  
Z68303-6|CAD89754.1|  708|Caenorhabditis elegans Hypothetical pr...    25   8.7  
Z68303-5|CAA92639.2|  706|Caenorhabditis elegans Hypothetical pr...    25   8.7  
AC024776-19|AAK68480.2|  398|Caenorhabditis elegans Hypothetical...    25   8.7  

>Z81073-1|CAB03029.1|  645|Caenorhabditis elegans Hypothetical
           protein F30F8.1 protein.
          Length = 645

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -1

Query: 148 LNNEAYLAG*SIVSYRELTRQIAPPTKNGHAPPPTES 38
           +N + YLAG    + R+L++ + PP  +G A  PT +
Sbjct: 21  MNPQRYLAG----NQRDLSQPLPPPVLSGEAVLPTST 53


>Z79695-2|CAB01971.2| 1008|Caenorhabditis elegans Hypothetical protein
            F27D4.6 protein.
          Length = 1008

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = -1

Query: 151  HLNNEAYLA-G*SIVSYRELTRQIAPPTKNGHAPPPT 44
            H+ N  Y+      + Y EL +QI PP      P PT
Sbjct: 903  HMKNINYIGTSADFLYYEELIKQITPPKVRAPVPFPT 939


>Z68303-6|CAD89754.1|  708|Caenorhabditis elegans Hypothetical
           protein ZK809.5b protein.
          Length = 708

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 70  KNGHAPPPTESRKSC*SVNPSG 5
           + GH    TESRK   S++PSG
Sbjct: 400 RQGHNQKNTESRKIIRSISPSG 421


>Z68303-5|CAA92639.2|  706|Caenorhabditis elegans Hypothetical
           protein ZK809.5a protein.
          Length = 706

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 70  KNGHAPPPTESRKSC*SVNPSG 5
           + GH    TESRK   S++PSG
Sbjct: 398 RQGHNQKNTESRKIIRSISPSG 419


>AC024776-19|AAK68480.2|  398|Caenorhabditis elegans Hypothetical
           protein Y41D4B.6 protein.
          Length = 398

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -3

Query: 218 DTGPSKKNFNTSSVMLRDTRPSTPK*RSL 132
           D GPS+ +  T S  LR  RPS P   SL
Sbjct: 285 DDGPSRHSPLTFSEYLRSQRPSPPSSFSL 313


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,717,566
Number of Sequences: 27780
Number of extensions: 114220
Number of successful extensions: 310
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 270584450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)