Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0606
(608 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 48 1e-04
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb... 38 0.14
UniRef50_A1SS79 Cluster: ROK family protein; n=2; Psychromonas|R... 35 1.3
UniRef50_Q7NG42 Cluster: Dolichyl phosphoryl mannose synthase; n... 35 1.7
UniRef50_A0C9G1 Cluster: Chromosome undetermined scaffold_16, wh... 33 4.0
UniRef50_Q3JYH0 Cluster: Conserved domain protein; n=9; Streptoc... 33 7.0
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-... 33 7.0
UniRef50_Q9LMR6 Cluster: T10F20.23 protein; n=1; Arabidopsis tha... 32 9.3
UniRef50_Q9LM27 Cluster: T10O22.20; n=1; Arabidopsis thaliana|Re... 32 9.3
>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
Length = 191
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +1
Query: 301 PHRTNIRFFLLLVWVGELTAHLVLSGYWSP 390
P R + FLLL WV ELTAHLVLSGYWSP
Sbjct: 146 PKRFCLSRFLLLRWVDELTAHLVLSGYWSP 175
>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
mori (Silk moth)
Length = 782
Score = 38.3 bits (85), Expect = 0.14
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 512 AGWWYLPARTHKRSY 556
A WWYLPARTHKRSY
Sbjct: 569 AEWWYLPARTHKRSY 583
>UniRef50_A1SS79 Cluster: ROK family protein; n=2; Psychromonas|Rep:
ROK family protein - Psychromonas ingrahamii (strain 37)
Length = 408
Score = 35.1 bits (77), Expect = 1.3
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = -1
Query: 365 RWAVSSPTQTSNKKKRMFVRCGNRTHELRCNNQGRQLRTTKSVRVKSEYEKKYFPLYNST 186
R A+S T N + ++ G +T L C N + TTK +++KSE E++ S
Sbjct: 77 RCAISLAPNTDNIHV-LAIKIGQKTLSLSCYNLAAEQLTTKKIKIKSEDEQQLLAFLISE 135
Query: 185 LFVSINKIQK 156
+ I K QK
Sbjct: 136 IDNFIKKQQK 145
>UniRef50_Q7NG42 Cluster: Dolichyl phosphoryl mannose synthase; n=2;
Cyanobacteria|Rep: Dolichyl phosphoryl mannose synthase
- Gloeobacter violaceus
Length = 255
Score = 34.7 bits (76), Expect = 1.7
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +3
Query: 249 GA*LAPLIVAPKLVGSIPTSDKHSFFFI---ACLGGRAHSPPGVKWLLEPIDIYNVNAPP 419
GA L L++ P +VG + SD S FF+ ACL G+ SP G K LLE + ++
Sbjct: 163 GAQLIGLVLLPGVVGRL--SDPMSGFFVVRRACLAGKPLSPLGYKILLEVLGRGDIRTIR 220
Query: 420 TLRYKF 437
+ Y F
Sbjct: 221 EVGYVF 226
>UniRef50_A0C9G1 Cluster: Chromosome undetermined scaffold_16, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_16,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 368
Score = 33.5 bits (73), Expect = 4.0
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -1
Query: 335 SNKKKRMFVRCGNRTHELRCNNQGRQLRTTKSVRVKSEYEKKYFP 201
+ +KKR + N + NN+G QL TT V K E+ KY P
Sbjct: 286 NQQKKRALMDAINNFSKNTTNNKGIQLETTLYVPKKQEFSSKYLP 330
>UniRef50_Q3JYH0 Cluster: Conserved domain protein; n=9;
Streptococcus|Rep: Conserved domain protein -
Streptococcus agalactiae serotype Ia
Length = 321
Score = 32.7 bits (71), Expect = 7.0
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = -1
Query: 260 QLRTTKSVRVKSEYEKKYFPLYNSTLFVSINKIQK*QHYDLSRSVEQ 120
+LR + + +YE KY PL+ + + +N++Q+ D+++++ Q
Sbjct: 94 ELRNISTHYITEDYELKYAPLFQACVLNYVNELQRFHSRDVTKAISQ 140
>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
protein; n=25; Arthropoda|Rep: Endonuclease and reverse
transcriptase-like protein - Bombyx mori (Silk moth)
Length = 986
Score = 32.7 bits (71), Expect = 7.0
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1
Query: 47 RQRLGFAPGIAEVHG 3
RQRLG APGIAEVHG
Sbjct: 970 RQRLGSAPGIAEVHG 984
>UniRef50_Q9LMR6 Cluster: T10F20.23 protein; n=1; Arabidopsis
thaliana|Rep: T10F20.23 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 468
Score = 32.3 bits (70), Expect = 9.3
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -2
Query: 334 AIKKNECLSDVGIEPTSFGATIRGANYAPPSQSELSQSTRKNTFL 200
A+K NE L D GIE F T+ A+ QS L + +N FL
Sbjct: 62 AMKLNELLKDWGIEKKVFTLTVDNASANDTMQSILKHNASENAFL 106
>UniRef50_Q9LM27 Cluster: T10O22.20; n=1; Arabidopsis thaliana|Rep:
T10O22.20 - Arabidopsis thaliana (Mouse-ear cress)
Length = 876
Score = 32.3 bits (70), Expect = 9.3
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -2
Query: 334 AIKKNECLSDVGIEPTSFGATIRGANYAPPSQSELSQSTRKNTFL 200
A+K NE L D GIE F T+ A+ QS L + +N FL
Sbjct: 411 AMKLNELLKDWGIEKKVFTLTVDNASANDTMQSILKHNASENAFL 455
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,263,400
Number of Sequences: 1657284
Number of extensions: 13641815
Number of successful extensions: 33264
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 32200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33259
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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