Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0606
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   1.5  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    23   2.7  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   3.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   3.5  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   8.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.1  

>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 16/55 (29%), Positives = 21/55 (38%)
 Frame = -1

Query: 233 VKSEYEKKYFPLYNSTLFVSINKIQK*QHYDLSRSVEQ*LRNPTRLPGDVYGRRW 69
           + S +   Y P   +   VS     + QHY  +  V Q  R     PG V   RW
Sbjct: 1   MSSYFANSYMPDMRNGGVVSAEHPHQHQHYGAAVQVPQGGRRRAARPGVVTTPRW 55


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 173 YLRRAYCCREESIFSR 220
           +L+  YCCRE  +  R
Sbjct: 77  FLKECYCCRESFLRER 92


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
 Frame = -1

Query: 362 WAVSSPTQTSNKKKRMFVRCGNRTHELRC--NNQGRQLRTT 246
           WA+        KK    V CG     +RC  +   RQ+  T
Sbjct: 229 WALMEQPLAQTKKLATIVGCGTDETMIRCLKSRPARQIALT 269


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 502 GGIGRVVVPT 531
           GG+GR VVPT
Sbjct: 461 GGLGRAVVPT 470


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 359 AVSSPTQTSNKKKRMFVRCGNRTHELRCNN 270
           +++ PT+T  + KR       RT  L  NN
Sbjct: 35  SITQPTKTVIQSKRPLAPAPERTSVLVTNN 64


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 375 WLLEPIDIYNVNAPPTLRYK 434
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,048
Number of Sequences: 336
Number of extensions: 3497
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)