Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0605
         (599 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      24   0.85 
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   2.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.0  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 265 IWALFIFLSSGCRDAR 218
           +W L IFLSS C D R
Sbjct: 10  LWKLTIFLSSMCLDPR 25


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +2

Query: 431 PQSGRDSASSRTPRPNVKPISWTSTLNIVCLT*RSHQH 544
           P     S+   TP P+  P+++    N    T   H H
Sbjct: 256 PHGSNTSSLITTPSPSASPLAYQHEYNSFNWTANGHGH 293


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/42 (16%), Positives = 21/42 (50%)
 Frame = -1

Query: 290 AFYVCFTNYLGTFYFFVVRLPGCPLIVRYDGAHLIFFHNRLI 165
           AF++C   +    ++ +V   G    + ++  + I + +R++
Sbjct: 300 AFFICLLPFRALTFWIIVAPAGSNFEIGFENYYNILYFSRIM 341


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 296 FNAFYVCFTNY 264
           FN FY+CF  Y
Sbjct: 319 FNLFYLCFCFY 329


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 296 FNAFYVCFTNY 264
           FN FY+CF  Y
Sbjct: 275 FNLFYLCFCFY 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,030
Number of Sequences: 336
Number of extensions: 2339
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)