Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0605
         (599 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   5.7  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   7.5  
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    23   10.0 
AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related ...    23   10.0 
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   10.0 

>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -2

Query: 298 LLMHFMFVSQIIWALFIFL 242
           L +HF+ ++Q+I  +F+FL
Sbjct: 10  LWIHFLNITQLISLIFVFL 28



 Score = 22.6 bits (46), Expect = 10.0
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 60  SSTIYNLPDIRLYTVVSVSKY 122
           SS +YN+ +++L +++   KY
Sbjct: 234 SSNLYNVDNLKLVSMIGQGKY 254


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 304 ICLLMHFMFVSQIIWALFIFL 242
           I LL+H++ +S  IW  FI++
Sbjct: 255 IALLLHYLHLSTSIWC-FIYI 274


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 469 TPQRKTYILDEHTKHR 516
           TP  + YI+DEH  +R
Sbjct: 62  TPALQAYIMDEHNLNR 77


>AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related 1
           protein protein.
          Length = 178

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 469 TPQRKTYILDEHTKHR 516
           TP  + YI+DEH  +R
Sbjct: 62  TPALQAYIMDEHNLNR 77


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 5   FFMNLKSISASTNYSFVTIVHN 70
           +F+  KS +A     +VT+VHN
Sbjct: 110 YFLKRKSEAAEVIEEYVTMVHN 131


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,568
Number of Sequences: 2352
Number of extensions: 9737
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)