Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0604
         (609 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    27   0.47 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   5.8  

>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 27.1 bits (57), Expect = 0.47
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 208 PVRALSCKNHNHINLMTFNDIRNSGLDVSSITDIENPL 95
           P+RA  C+ H + +L  F +++  GLD   I   E PL
Sbjct: 129 PLRAWLCE-HANTSLAKFQNLKEIGLDKPLIFSSETPL 165


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 506 LFARKNNNDHFNFRIMSDFF 565
           LF  +NN+   NFR++ D +
Sbjct: 738 LFEERNNDREANFRLLEDAY 757


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,797
Number of Sequences: 2352
Number of extensions: 10075
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)