Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0604
(609 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 21 7.1
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 7.1
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 7.1
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 7.1
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 21 7.1
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 21 7.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.4
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.4
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.4
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.4
DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 21 9.4
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 21.4 bits (43), Expect = 7.1
Identities = 11/41 (26%), Positives = 17/41 (41%)
Frame = -3
Query: 247 LGKRANEELELYVPVRALSCKNHNHINLMTFNDIRNSGLDV 125
+G EEL+ + CK I+ ND+ +DV
Sbjct: 14 VGALTIEELKTRLHTEQSVCKTETGIDQQKANDVIEGNIDV 54
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 175 DYDSCSLMLEPVRTIL 222
+++ C+L LEP R IL
Sbjct: 622 EWERCNLGLEPPRVIL 637
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 175 DYDSCSLMLEPVRTIL 222
+++ C+L LEP R IL
Sbjct: 622 EWERCNLGLEPPRVIL 637
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 175 DYDSCSLMLEPVRTIL 222
+++ C+L LEP R IL
Sbjct: 622 EWERCNLGLEPPRVIL 637
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 21.4 bits (43), Expect = 7.1
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 94 LVDFRYLLLRKRPTQNCVYR*TSLN*YDYDSCSLMLEPVRT 216
++DF+ L RK+ T Y ++N +DY+ S + V +
Sbjct: 207 VMDFQIGLQRKKDTTFDDYLDYAINPFDYEKRSTDFQDVES 247
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 21.4 bits (43), Expect = 7.1
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 94 LVDFRYLLLRKRPTQNCVYR*TSLN*YDYDSCSLMLEPVRT 216
++DF+ L RK+ T Y ++N +DY+ S + V +
Sbjct: 207 VMDFQIGLQRKKDTTFDDYLDYAINPFDYEKRSTDFQDVES 247
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 121 RKRPTQNCVYR 153
RKRP N VYR
Sbjct: 389 RKRPMHNVVYR 399
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 302 KTVPIVRTLVSPLHRFMFLVRYDI 373
KT+ ++ + P+ FMFL + I
Sbjct: 460 KTIDVIARITFPVAYFMFLTFFFI 483
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 121 RKRPTQNCVYR 153
RKRP N VYR
Sbjct: 358 RKRPMHNVVYR 368
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 302 KTVPIVRTLVSPLHRFMFLVRYDI 373
KT+ ++ + P+ FMFL + I
Sbjct: 446 KTIDVIARITFPVAYFMFLTFFFI 469
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 121 RKRPTQNCVYR 153
RKRP N VYR
Sbjct: 409 RKRPMHNVVYR 419
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 302 KTVPIVRTLVSPLHRFMFLVRYDI 373
KT+ ++ + P+ FMFL + I
Sbjct: 480 KTIDVIARITFPVAYFMFLTFFFI 503
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 121 RKRPTQNCVYR 153
RKRP N VYR
Sbjct: 358 RKRPMHNVVYR 368
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 302 KTVPIVRTLVSPLHRFMFLVRYDI 373
KT+ ++ + P+ FMFL + I
Sbjct: 429 KTIDVIARITFPVAYFMFLTFFFI 452
>DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein.
Length = 135
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -3
Query: 229 EELELYVPVRALSCKNHNHINLMTFNDIRNSGLDV 125
EEL++ + CK + I+ T +DI DV
Sbjct: 20 EELKIQLHDVQEICKTESGIDQQTVDDINEVNFDV 54
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,776
Number of Sequences: 438
Number of extensions: 3685
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -