Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0603
(225 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.007
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.047
SPBC651.09c |||RNA polymerase II associated Paf1 complex |Schizo... 29 0.063
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 29 0.063
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 29 0.083
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 0.14
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 0.25
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 0.58
SPAPB1A11.04c |||transcription factor |Schizosaccharomyces pombe... 26 0.58
SPBC19C2.11c |||mitochondrial outer membrane protein |Schizosacc... 26 0.58
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 0.77
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 26 0.77
SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster... 26 0.77
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 25 1.0
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 25 1.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 1.0
SPAC6C3.04 |cit1||citrate synthase|Schizosaccharomyces pombe|chr... 25 1.3
SPBC19F5.04 |||aspartate kinase |Schizosaccharomyces pombe|chr 2... 25 1.3
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 24 2.4
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 24 2.4
SPAC3G6.08 |erv1||sulfhydryl oxidase |Schizosaccharomyces pombe|... 24 2.4
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 24 3.1
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 24 3.1
SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory... 23 4.1
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 23 4.1
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 23 4.1
SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr ... 23 4.1
SPAC21E11.03c |pcr1|mts2|transcription factor Pcr1|Schizosacchar... 23 5.4
SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces p... 23 5.4
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 23 5.4
SPAC1D4.05c |||Erd1 homolog|Schizosaccharomyces pombe|chr 1|||Ma... 23 5.4
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 23 5.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 23 7.2
SPAC11D3.03c |||meiotic chromosome segregation protein|Schizosac... 23 7.2
SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|c... 22 9.5
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 22 9.5
SPBC947.13 |rba50||RNA polymerase II associated protein |Schizos... 22 9.5
SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces ... 22 9.5
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.7 bits (71), Expect = 0.007
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSP--SPSPACHP 104
P P ++ AG PP PPP GGS +P+P P
Sbjct: 766 PPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 28.3 bits (60), Expect = 0.14
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSP 92
P+P M G PP PPP G G P P P
Sbjct: 754 PAPIM---GGPPPPPPPPGVAGAGPPPPPP 780
Score = 27.5 bits (58), Expect = 0.25
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 33 STPPHPPPVFDGGGSPSPSPACHPTVIRSVPP 128
S PP PP V +P+P P P I PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP 762
Score = 26.2 bits (55), Expect = 0.58
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 39 PPHPPPVFDGGGSPSPSPACHPTV 110
PP PPP G P P P P V
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAV 785
Score = 25.8 bits (54), Expect = 0.77
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSP 92
P P G PP PP V G P P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 23.8 bits (49), Expect = 3.1
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 42 PHPPPVFDGGGSPSPSPACHPTVIRSVPP 128
P PPP GG P P P P V + PP
Sbjct: 750 PVPPPAPIMGGPPPPPPP--PGVAGAGPP 776
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.047
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSP 92
P P S S PP PPP G +P+ P
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 24.6 bits (51), Expect = 1.8
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSPACHPTVIRSVPPYS 134
P PR + AG + P PP P P P P+ R PP S
Sbjct: 341 PPPRSNAAG--SIPLPPQ--GRSAPPPPPPRSAPSTGRQPPPLS 380
Score = 22.6 bits (46), Expect = 7.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 33 STPPHPPPVFDGGGSPSPSPACHPTVIRSVP 125
+ PP PP +P+P+PA I +P
Sbjct: 465 AAPPLPPAAPAPPPAPAPAPAAPVASIAELP 495
>SPBC651.09c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 29.5 bits (63), Expect = 0.063
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +3
Query: 12 RMSEAGCSTPPHPPPVFDGGGSPSPSPACHPTVIRSVPPYSVIKFEGAQSVVKAESSPAS 191
R+S A +TP P G SP PSP+ T I S P K ++SVV A +S
Sbjct: 449 RLSAAATATPMSAPTSVLTGTSPQPSPSL-STSIMSTP-----KLNPSESVVVASEKASS 502
Query: 192 GKNQP 206
P
Sbjct: 503 PDLSP 507
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 29.5 bits (63), Expect = 0.063
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 37 RRRTRRPCSMAVALRHLHPLAIPPLYARCHPTQSSSLKVHNPLSKQKVHLRVEKTSP 207
RRRT++ + + +PL PP Y P + +HNP+ R T P
Sbjct: 58 RRRTKKG-QATIPFTNFYPLTAPPPYT-AEPEARYNSTIHNPMPPMSQAYRPPPTEP 112
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 29.1 bits (62), Expect = 0.083
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 34 ARRRTRRPCSMAVALRHLHPLAIPPLYARCHPTQSSSLKVHNPL-SKQKVHLRVEKTSPQ 210
A R+ P MA +L A+ P+++ +P+ +SSL+ +PL S+ + H P
Sbjct: 168 AHLRSSMPLVMANSLSPPSSRALKPIHSLSNPSTASSLEPSSPLGSEDECHPPTSDMQPT 227
Query: 211 RSLS 222
L+
Sbjct: 228 HELN 231
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.3 bits (60), Expect = 0.14
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +3
Query: 9 PRMSEAGCSTPPHPPPVFDGG--GSPSPSPACHPTVIRSVPP 128
P S + STPP P G SP PS + T S+PP
Sbjct: 306 PPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPP 347
Score = 26.6 bits (56), Expect = 0.44
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +3
Query: 9 PRMSEAGCSTPPHPPPVFDGGGSPSP--SPACHPTVIRSVPP 128
P S + STPP P G S SP S + T S+PP
Sbjct: 360 PPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPP 401
Score = 23.4 bits (48), Expect = 4.1
Identities = 12/42 (28%), Positives = 15/42 (35%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSPACHPTVIRSVPP 128
P S PP D SP P+ + T S+PP
Sbjct: 252 PPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPP 293
Score = 22.2 bits (45), Expect = 9.5
Identities = 11/42 (26%), Positives = 15/42 (35%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSPACHPTVIRSVPP 128
P S PP D +P P+ + T S+PP
Sbjct: 139 PPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPP 180
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.5 bits (58), Expect = 0.25
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +3
Query: 78 PSPSPACHPTVIRSVPPYSVIKFEGAQSVVKAESSPASGKNQPTTQSQL 224
PS S T + P + + + SVV + SSP+S + T S L
Sbjct: 187 PSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSL 235
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 0.58
Identities = 17/63 (26%), Positives = 24/63 (38%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSPACHPTVIRSVPPYSVIKFEGAQSVVKAESS 182
P+P ++ P PP P PSPA P + PP AQ +S
Sbjct: 128 PAPPTPQSELRPPTSAPP---RPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 183 PAS 191
P++
Sbjct: 185 PSA 187
>SPAPB1A11.04c |||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 26.2 bits (55), Expect = 0.58
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 140 QV*RCTIRCQSRKFTCEWKKPAHNAVS 220
QV + IRC+ +K C +KP+ A S
Sbjct: 19 QVSQACIRCRQKKIKCSGEKPSCQACS 45
>SPBC19C2.11c |||mitochondrial outer membrane protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 26.2 bits (55), Expect = 0.58
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 78 PSPSPACHPTVIRSVPPYSVIKFEGAQS-VVKAESSPAS 191
P SP+ ++ RS PP ++I+ QS + A SSPA+
Sbjct: 277 PISSPSIPMSIYRSTPPDTIIQQLTTQSDDISAVSSPAT 315
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.8 bits (54), Expect = 0.77
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 27 GCSTPPHPPPVFDGGGSPSPSP 92
G PP PPP F+ P P P
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPP 28
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 25.8 bits (54), Expect = 0.77
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 22 KPGAARRRTRRPCSMAVALRHLHPLAIPPLYARCHPTQSSSL-KVHNPLSKQKVHLRVEK 198
KP RR R+P S++ + LH + + PT SS+ KV+ P ++++V
Sbjct: 124 KPSVRGRRGRKPSSLSSST--LHSVNEKQPNSSISPTIESSMNKVNLPGAEEQVSATPLP 181
Query: 199 TSPQRSLS 222
SP LS
Sbjct: 182 ASPNALLS 189
>SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 480
Score = 25.8 bits (54), Expect = 0.77
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 30 CSTPPHPPPVFDGGGSPSPSPACHPTVIRSVPPYS 134
CS PH PV G SPS H + + S+P Y+
Sbjct: 110 CSYNPHYLPVNSNGSSPS-----HTSSLDSIPGYA 139
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.4 bits (53), Expect = 1.0
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +3
Query: 48 PPPVFDGGGSPSPSPACHPTVIRSVPPYSVIKFEGAQSVVKAESSPASGKNQPTTQ 215
PP S S SP+ P ++S + + S +K +S S K PT++
Sbjct: 374 PPSATSFQPSSSRSPSVDPNTVKSAQHIPRMSPSPSASALKTQSHVPSAKVPPTSK 429
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 25.4 bits (53), Expect = 1.0
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 33 STPPHPPPVFDGGGSPSPSPACHPTVIRSVPPYSVIKFEGAQSVVKAESSP 185
ST P P GG S + +P+ V+ ++ P KF+G +S A S+P
Sbjct: 456 STVPKMNPKLQGGNSVT-APSTPSKVLPAMSPKVAPKFQGGRSST-APSTP 504
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.4 bits (53), Expect = 1.0
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSPACHPTVIRSVPPYSVIKFEGAQSVVKAESS 182
P P++S PP P P D P PS A + S PP GA S +
Sbjct: 1013 PVPKLSS---KAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPK-SSSGAPSAPPPVPA 1068
Query: 183 PAS 191
P+S
Sbjct: 1069 PSS 1071
Score = 23.4 bits (48), Expect = 4.1
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 3 PSPRMSEAGCSTP-PHPPPVFDGGGSPSPS---PACHPTVIRSVPPYSV 137
P P+ S S P P P P + P+PS P P+ I VP SV
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSV 1099
Score = 22.2 bits (45), Expect = 9.5
Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSP--SPACHPTVIRSVPPYSVIKFEGAQSVVKAE 176
P+P STP P SPSP S R+ S K E ++ +
Sbjct: 1240 PAPSSEAPSVSTPRSSVPSPHSNASPSPTSSSMASAAPARTSVSRSKSKAERHETSTSSR 1299
Query: 177 SSPASGKN 200
S SG++
Sbjct: 1300 KSSKSGEH 1307
>SPAC6C3.04 |cit1||citrate synthase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 473
Score = 25.0 bits (52), Expect = 1.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 46 TRRPCSMAVALRHLHPLAIPPLYARCHPTQSSSLK 150
TRR S ++ L + PL+ + T+SSSLK
Sbjct: 9 TRRLASSLLSQASLRSRQLNPLFTSSYSTRSSSLK 43
>SPBC19F5.04 |||aspartate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 25.0 bits (52), Expect = 1.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 15 MSEAGCSTPPHPPPV 59
+S G +TPPHPP +
Sbjct: 321 ISRHGSATPPHPPKI 335
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 24.2 bits (50), Expect = 2.4
Identities = 16/60 (26%), Positives = 22/60 (36%)
Frame = +3
Query: 42 PHPPPVFDGGGSPSPSPACHPTVIRSVPPYSVIKFEGAQSVVKAESSPASGKNQPTTQSQ 221
P PP+ D P P P VP + K +E+S N PT ++Q
Sbjct: 120 PGEPPLPDEPVPEEPLPGEPPLPNEPVPETNCHKESPLSDETVSETSKNDTSNSPTNENQ 179
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 24.2 bits (50), Expect = 2.4
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSPACHPTVIRSVPP 128
P P E G PP PP+ G P P H +PP
Sbjct: 222 PPPMHHEPGEHMPP--PPMHHEPGEHMPPPPMHHEPGEHMPP 261
Score = 24.2 bits (50), Expect = 2.4
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSPACHPTVIRSVPP 128
P P E G PP PP+ G P P H +PP
Sbjct: 235 PPPMHHEPGEHMPP--PPMHHEPGEHMPPPPMHHEPGEHMPP 274
Score = 24.2 bits (50), Expect = 2.4
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSPACHPTVIRSVPP 128
P P E G PP PP+ G P P H +PP
Sbjct: 248 PPPMHHEPGEHMPP--PPMHHEPGEHMPPPPMHHEPGEHMPP 287
Score = 24.2 bits (50), Expect = 2.4
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSPACHPTVIRSVPP 128
P P E G PP PP+ G P P H +PP
Sbjct: 261 PPPMHHEPGEHMPP--PPMHHEPGEHMPPPPMHHEPGEHMPP 300
Score = 24.2 bits (50), Expect = 2.4
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSPACHPTVIRSVPP 128
P P E G PP PP+ G P P H +PP
Sbjct: 274 PPPMHHEPGEHMPP--PPMHHEPGEHMPPPPMHHEPGEHMPP 313
Score = 24.2 bits (50), Expect = 2.4
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSPACHPTVIRSVPP 128
P P E G PP PP+ G P P H +PP
Sbjct: 287 PPPMHHEPGEHMPP--PPMHHEPGEHMPPPPMHHEPGEHMPP 326
Score = 24.2 bits (50), Expect = 2.4
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSPACHPTVIRSVPP 128
P P E G PP PP+ G P P H +PP
Sbjct: 300 PPPMHHEPGEHMPP--PPMHHEPGEHMPPPPMHHEPGEHMPP 339
Score = 22.6 bits (46), Expect = 7.2
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSPACHPTVIRSVPP 128
P P + G PP PP+ G P P H +PP
Sbjct: 209 PPPMHHKPGEHMPP--PPMHHEPGEHMPPPPMHHEPGEHMPP 248
>SPAC3G6.08 |erv1||sulfhydryl oxidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 182
Score = 24.2 bits (50), Expect = 2.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 161 RCQSRKFTCEWKKPAHNAVS 220
R SR+ CEW AHN V+
Sbjct: 141 RVDSRESLCEWICEAHNDVN 160
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 23.8 bits (49), Expect = 3.1
Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSPACHPTVIRSVPPYSVIKFEGAQSVVKAES- 179
PSP +S PP + +PS P ++ +PP ++ S V++ S
Sbjct: 566 PSPSISVTQRPAVNVGPPPYVRPSAPSKLPDTRQSIGDPLPPGAMANVSAGPSSVRSSSY 625
Query: 180 -SPASGKNQPTTQSQ 221
S AS T Q
Sbjct: 626 NSTASESKSEITSHQ 640
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.8 bits (49), Expect = 3.1
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 39 PPHPPPVFDGGGSPSPSPA 95
PP PPP+ G SPA
Sbjct: 948 PPPPPPLVSAAGGKFVSPA 966
>SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory
factor |Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 23.4 bits (48), Expect = 4.1
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 54 PVFDGGGSPSPSPACHPTVIRSVPPYSVIK 143
PV SP +PA T + S PP S K
Sbjct: 580 PVTASETSPPHAPAVSSTPVTSAPPVSQTK 609
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 23.4 bits (48), Expect = 4.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 106 PLYARCHPTQSSSLKVHNP 162
P YA HPTQ++ + NP
Sbjct: 500 PSYAPRHPTQANGSRYMNP 518
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 23.4 bits (48), Expect = 4.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 28 GAARRRTRRPCSMAVALRHLHPLAIPPLYAR 120
G R+ T R CS + H+ I PL+ R
Sbjct: 937 GEGRKPTTRKCSNCGQVGHMKTNKICPLFGR 967
>SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 727
Score = 23.4 bits (48), Expect = 4.1
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 45 HPPPVFDGGGSPSPSPACHPTV 110
HP P + SPS HP+V
Sbjct: 89 HPTPPYTNFDDESPSSPTHPSV 110
>SPAC21E11.03c |pcr1|mts2|transcription factor
Pcr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 171
Score = 23.0 bits (47), Expect = 5.4
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +2
Query: 74 LSVTFTRLPSHRYTLGATLLSHQV*RCTIRCQS 172
L + ++L + L + LL+HQ +C+++ +S
Sbjct: 52 LQLLLSQLQQEAFRLKSQLLAHQGCQCSVKIRS 84
>SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1272
Score = 23.0 bits (47), Expect = 5.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 83 TFTRLPSHRYTLGATLLSH 139
T R P HR +TL+SH
Sbjct: 923 TINRFPGHRERYVSTLISH 941
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 23.0 bits (47), Expect = 5.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 66 GGGSPSPSPACHPTV 110
GGG+P+ +P PTV
Sbjct: 834 GGGNPTAAPTNEPTV 848
>SPAC1D4.05c |||Erd1 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 387
Score = 23.0 bits (47), Expect = 5.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 16 CLKPGAARRRTRRPCSMAVALRHLHPLAIPPLYARCHPTQS 138
CL G +RR+ ++ AL+H L + L A H Q+
Sbjct: 236 CLHYGLSRRKHTFKINLLSALKHATALPVIYLSAIIHAKQT 276
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 23.0 bits (47), Expect = 5.4
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 39 PPHPPPVFDGGGSPSPSPACHP--TVIRSVPPYSVIKFEGAQS 161
PP PP + SPSP+ A P V+ ++P Y I + S
Sbjct: 290 PPPPPGMV--MASPSPAAATIPGAPVMPNIPFYQTINAQNGYS 330
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 22.6 bits (46), Expect = 7.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 88 EGDGEPPPSNTGGGCGGVL 32
EGD + PPS++ G G L
Sbjct: 568 EGDAKSPPSSSKSGQGSSL 586
>SPAC11D3.03c |||meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 22.6 bits (46), Expect = 7.2
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +3
Query: 96 CHPTVIRSVPPYSVIKFE 149
CH + R++ PY + +F+
Sbjct: 173 CHSNLTRAIMPYGLTEFD 190
>SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 408
Score = 22.2 bits (45), Expect = 9.5
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 34 ARRRTRRPCSMAVALRHLHPLAIPPLYARCHPTQSSSLKVHNPL 165
A R + P ++A+ PLA P A P+ + + V+N L
Sbjct: 169 AVRMPQHPVALALISISDSPLAAPSANASTRPSPTLAKHVYNDL 212
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 22.2 bits (45), Expect = 9.5
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 48 PPPVFDGGGSPSPS 89
PPP+ + GS SPS
Sbjct: 394 PPPLNENSGSQSPS 407
>SPBC947.13 |rba50||RNA polymerase II associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 22.2 bits (45), Expect = 9.5
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +3
Query: 57 VFDGGGSPSPSPACHPTVIRSVPPYSVIKFEGAQSVVKAESSP 185
V GSPSP A IRS V+ + A+ + K S P
Sbjct: 177 VDSSSGSPSPPMALSQAEIRSRQTKRVMFPDKAEELTKIFSLP 219
>SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 22.2 bits (45), Expect = 9.5
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSPACHP 104
P P +E STPP P V + P+ HP
Sbjct: 209 PVPSAAEESVSTPPQ-PAVAPSVSAVVPNLPVHP 241
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,019,903
Number of Sequences: 5004
Number of extensions: 20308
Number of successful extensions: 119
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 54
effective length of database: 2,092,262
effective search space used: 41845240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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