Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0603
(225 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 29 0.005
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 0.61
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 1.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 20 3.2
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 20 4.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 20 4.3
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 20 4.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 20 4.3
AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein. 20 4.3
AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein ... 19 5.7
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 19 7.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 19 7.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 19 7.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 19 7.5
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 19 7.5
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 19 7.5
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 19 7.5
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 19 7.5
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 19 7.5
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 19 7.5
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 19 9.9
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 19 9.9
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 19 9.9
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 19 9.9
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 19 9.9
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 19 9.9
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 19 9.9
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 29.5 bits (63), Expect = 0.005
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 54 PVFDGGGSPSPSPACHPTVIRSVPPYSV 137
P + GGGS SPSP+ + SV P S+
Sbjct: 81 PSYPGGGSSSPSPSSPSSFFSSVSPTSL 108
Score = 21.8 bits (44), Expect = 1.1
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPS 89
P+PR++ A S+ PP + PS
Sbjct: 513 PNPRIASAPSSSTSSSPPAKGAAAAGQPS 541
Score = 21.0 bits (42), Expect = 1.9
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 21 EAGCSTPPHPPPVFDGGGSPSPSP 92
+ ST PV + SPSP+P
Sbjct: 492 DGAASTAVIHEPVVETNSSPSPNP 515
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 0.61
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 6 SPRMSEAGCSTPPHPPPVFDGGGSPSPSPACHPTVIRSVP 125
SP+ + G +PP+P GG P P+ +P+ + P
Sbjct: 30 SPQAPQRG--SPPNPSQGPPPGGPPGAPPSQNPSQMMISP 67
Score = 20.2 bits (40), Expect = 3.2
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 157 NPLSKQKVHLRVEKTSPQ 210
+PL + VH++ E SP+
Sbjct: 654 SPLDEPAVHIKQEGQSPE 671
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 1.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +3
Query: 99 HPTVIRSVPPYS 134
H + +R+VPPYS
Sbjct: 141 HVSFLRTVPPYS 152
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.2 bits (40), Expect = 3.2
Identities = 12/42 (28%), Positives = 16/42 (38%)
Frame = +3
Query: 3 PSPRMSEAGCSTPPHPPPVFDGGGSPSPSPACHPTVIRSVPP 128
P PR+++ + P GG P PTV S P
Sbjct: 1340 PVPRLAQDSSEDESYRGPSASGGRPVPERPERVPTVDLSPSP 1381
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 19.8 bits (39), Expect = 4.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 126 PYSVIKFEGAQSVVK 170
PY VI F G ++VK
Sbjct: 293 PYLVINFSGIFNLVK 307
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 19.8 bits (39), Expect = 4.3
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 97 AIPPLYARCHPTQSSSLKV 153
+IPP RC S SL+V
Sbjct: 1112 SIPPEDVRCAALTSQSLQV 1130
Score = 19.0 bits (37), Expect = 7.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -3
Query: 64 SNTGGGCGGVLHPASDI 14
+NTGGG + A DI
Sbjct: 1678 ANTGGGPDKIPETAEDI 1694
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 19.8 bits (39), Expect = 4.3
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = -3
Query: 73 PPPSNTGGGCGGVLHPASDIRGEG 2
P S G GG L P G+G
Sbjct: 58 PVGSAVAGTAGGALFPGMAAAGKG 81
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 19.8 bits (39), Expect = 4.3
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 97 AIPPLYARCHPTQSSSLKV 153
+IPP RC S SL+V
Sbjct: 1108 SIPPEDVRCAALTSQSLQV 1126
Score = 19.0 bits (37), Expect = 7.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -3
Query: 64 SNTGGGCGGVLHPASDI 14
+NTGGG + A DI
Sbjct: 1674 ANTGGGPDKIPETAEDI 1690
>AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein.
Length = 76
Score = 19.8 bits (39), Expect = 4.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 126 PYSVIKFEGAQSVVK 170
PY VI F G ++VK
Sbjct: 43 PYLVINFSGIFNLVK 57
>AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein
protein.
Length = 87
Score = 19.4 bits (38), Expect = 5.7
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +3
Query: 9 PRMSEAGCSTPPHPPP 56
PR + PP PPP
Sbjct: 42 PRSNRGPVLFPPGPPP 57
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 19.0 bits (37), Expect = 7.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -2
Query: 176 FCFDNGLCTFKLD 138
F FD+ LC+F ++
Sbjct: 193 FPFDDPLCSFAIE 205
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 19.0 bits (37), Expect = 7.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -2
Query: 176 FCFDNGLCTFKLD 138
F FD+ LC+F ++
Sbjct: 193 FPFDDPLCSFAIE 205
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 19.0 bits (37), Expect = 7.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -2
Query: 176 FCFDNGLCTFKLD 138
F FD+ LC+F ++
Sbjct: 244 FPFDDPLCSFAIE 256
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 19.0 bits (37), Expect = 7.5
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -2
Query: 176 FCFDNGLCTFKLD 138
F FD+ LC+F ++
Sbjct: 193 FPFDDPLCSFAIE 205
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 19.0 bits (37), Expect = 7.5
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +3
Query: 12 RMSEAGCSTPPHPPP 56
+MS CS PP P
Sbjct: 386 QMSCVACSPPPRQTP 400
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 19.0 bits (37), Expect = 7.5
Identities = 4/8 (50%), Positives = 7/8 (87%)
Frame = +2
Query: 65 WRWLSVTF 88
WRW+ +T+
Sbjct: 59 WRWIRLTY 66
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 19.0 bits (37), Expect = 7.5
Identities = 4/8 (50%), Positives = 7/8 (87%)
Frame = +2
Query: 65 WRWLSVTF 88
WRW+ +T+
Sbjct: 97 WRWIRLTY 104
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 19.0 bits (37), Expect = 7.5
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 92 RLPSHRYTLGATLLSHQV 145
R+ H LGA L+ H++
Sbjct: 415 RMSIHDELLGADLVEHRI 432
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 19.0 bits (37), Expect = 7.5
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -3
Query: 112 ITVGWQAGE 86
ITV W+AG+
Sbjct: 100 ITVSWKAGD 108
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 19.0 bits (37), Expect = 7.5
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = +3
Query: 24 AGCSTPPHPPP 56
+G PP PPP
Sbjct: 1854 SGSPEPPPPPP 1864
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 18.6 bits (36), Expect = 9.9
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 123 PPYSVIKFEGAQSVVKA 173
PPYS +FE + V +
Sbjct: 160 PPYSEARFEEIKKEVSS 176
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 18.6 bits (36), Expect = 9.9
Identities = 7/32 (21%), Positives = 18/32 (56%)
Frame = +3
Query: 108 VIRSVPPYSVIKFEGAQSVVKAESSPASGKNQ 203
++ ++PP S+ + E + K SP+ +++
Sbjct: 525 LLNALPPSSMKETEEEKKKTKQSLSPSENQSK 556
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 18.6 bits (36), Expect = 9.9
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 123 PPYSVIKFEGAQSVVKA 173
PPYS +FE + V +
Sbjct: 87 PPYSETRFEEIKKEVSS 103
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 18.6 bits (36), Expect = 9.9
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3
Query: 39 PPHPPPVFDGGGS 77
PP PPP G S
Sbjct: 343 PPPPPPSSSGPDS 355
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 18.6 bits (36), Expect = 9.9
Identities = 5/14 (35%), Positives = 10/14 (71%)
Frame = +1
Query: 157 NPLSKQKVHLRVEK 198
+P+S VH+++ K
Sbjct: 105 SPISDANVHIKISK 118
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 18.6 bits (36), Expect = 9.9
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 123 PPYSVIKFEGAQSVVKA 173
PPYS +FE + V +
Sbjct: 103 PPYSETRFEEIKKEVSS 119
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 18.6 bits (36), Expect = 9.9
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 123 PPYSVIKFEGAQSVVKA 173
PPYS +FE + V +
Sbjct: 160 PPYSETRFEEIKKEVSS 176
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,772
Number of Sequences: 438
Number of extensions: 2100
Number of successful extensions: 32
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3533460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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