Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0602
(621 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GZJ8 Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 - Bo... 184 2e-45
UniRef50_Q54BN2 Cluster: DNA repair exonuclease; n=1; Dictyostel... 119 5e-26
UniRef50_Q9XYZ4 Cluster: CG16928-PA; n=5; Diptera|Rep: CG16928-P... 113 4e-24
UniRef50_UPI00015B5FB8 Cluster: PREDICTED: similar to meiotic re... 112 6e-24
UniRef50_UPI0000D566D3 Cluster: PREDICTED: similar to CG16928-PA... 111 1e-23
UniRef50_P49959 Cluster: Double-strand break repair protein MRE1... 105 1e-21
UniRef50_UPI0000DB6F19 Cluster: PREDICTED: similar to meiotic re... 104 2e-21
UniRef50_A7SIW1 Cluster: Predicted protein; n=1; Nematostella ve... 101 2e-20
UniRef50_Q9UVN9 Cluster: Double-strand break repair protein MRE1... 101 2e-20
UniRef50_Q9XGM2 Cluster: Double-strand break repair protein MRE1... 99 7e-20
UniRef50_A1CU25 Cluster: Meiotic recombination protein Mre11; n=... 99 1e-19
UniRef50_Q5KHA6 Cluster: Meiotic DNA double-strand break process... 96 7e-19
UniRef50_Q4P5A9 Cluster: Putative uncharacterized protein; n=1; ... 95 9e-19
UniRef50_Q586P4 Cluster: Endo/exonuclease Mre11; n=3; Trypanosom... 95 2e-18
UniRef50_Q09683 Cluster: DNA repair protein rad32; n=1; Schizosa... 93 4e-18
UniRef50_Q9C291 Cluster: Double-strand break repair protein mus-... 93 4e-18
UniRef50_A5E785 Cluster: Putative uncharacterized protein; n=1; ... 91 2e-17
UniRef50_Q6BL74 Cluster: Debaryomyces hansenii chromosome F of s... 90 3e-17
UniRef50_A4HFW3 Cluster: Endo/exonuclease Mre11, putative; n=5; ... 88 1e-16
UniRef50_Q6ZBS2 Cluster: Putative DNA repair and meiosis protein... 86 7e-16
UniRef50_P32829 Cluster: Double-strand break repair protein MRE1... 83 4e-15
UniRef50_Q23255 Cluster: Double-strand break repair protein mre-... 83 7e-15
UniRef50_UPI00015B5FB6 Cluster: PREDICTED: similar to endo/exonu... 81 2e-14
UniRef50_Q016A4 Cluster: Mre11 protein; n=3; Ostreococcus|Rep: M... 80 4e-14
UniRef50_A5YZR9 Cluster: MRE11B; n=2; Magnoliophyta|Rep: MRE11B ... 79 8e-14
UniRef50_Q6CEM3 Cluster: Yarrowia lipolytica chromosome B of str... 78 1e-13
UniRef50_A5DLP0 Cluster: Putative uncharacterized protein; n=1; ... 76 8e-13
UniRef50_Q22G12 Cluster: Ser/Thr protein phosphatase family prot... 71 3e-11
UniRef50_Q8SRV0 Cluster: DOUBLE-STRAND BREAK DNA REPAIR PROTEIN;... 69 1e-10
UniRef50_Q0MR25 Cluster: MRE11-like protein; n=1; Penicillium ma... 68 2e-10
UniRef50_A3FQD2 Cluster: DNA repair and meiosis protein Mre11; n... 66 5e-10
UniRef50_UPI000049A054 Cluster: DNA repair protein rad32; n=1; E... 66 6e-10
UniRef50_Q7RBG7 Cluster: Rad32-related; n=6; Plasmodium (Vinckei... 60 4e-08
UniRef50_A5K9T7 Cluster: DNA repair exonuclease, putative; n=1; ... 60 6e-08
UniRef50_Q4U965 Cluster: Double-strand break repair protein, put... 59 7e-08
UniRef50_Q86C23 Cluster: Mre11; n=2; Entamoeba histolytica|Rep: ... 58 1e-07
UniRef50_A0DUM4 Cluster: Chromosome undetermined scaffold_64, wh... 57 3e-07
UniRef50_Q8I263 Cluster: DNA repair exonuclease, putative; n=1; ... 56 7e-07
UniRef50_A7AP02 Cluster: DNA repair protein (Mre11) family prote... 53 5e-06
UniRef50_A2ECB0 Cluster: Ser/Thr protein phosphatase, putative; ... 53 5e-06
UniRef50_Q8PUY5 Cluster: DNA double-strand break repair protein ... 42 0.016
UniRef50_Q46FJ9 Cluster: DNA repair protein; n=1; Methanosarcina... 40 0.036
UniRef50_Q8U1N9 Cluster: DNA double-strand break repair protein ... 40 0.063
UniRef50_A4ENU6 Cluster: Putative ATP-dependent dsDNA exonucleas... 39 0.084
UniRef50_Q3ISN6 Cluster: Conserved DNA repair operon protein; n=... 39 0.11
UniRef50_Q8DMQ1 Cluster: Tll0060 protein; n=1; Synechococcus elo... 38 0.15
UniRef50_A3HX94 Cluster: DNA repair exonuclease; n=1; Algoriphag... 38 0.19
UniRef50_Q9X1X0 Cluster: Exonuclease, putative; n=3; Thermotoga|... 38 0.26
UniRef50_A5YS39 Cluster: DNA double-strand break repair protein ... 37 0.34
UniRef50_O29231 Cluster: DNA double-strand break repair protein ... 37 0.34
UniRef50_A0RW71 Cluster: DNA repair exonuclease; n=1; Cenarchaeu... 37 0.45
UniRef50_A5GLK1 Cluster: Predicted phosphohydrolase; n=5; Synech... 36 0.78
UniRef50_A2BM15 Cluster: Predicted DNA repair exonuclease; n=1; ... 36 0.78
UniRef50_Q22P75 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_Q3A5P7 Cluster: DNA repair exonuclease; n=1; Pelobacter... 34 2.4
UniRef50_Q9UZC9 Cluster: DNA double-strand break repair protein ... 34 2.4
UniRef50_Q74CF0 Cluster: Nuclease SbcCD, D subunit, putative; n=... 34 3.1
UniRef50_Q4XVJ3 Cluster: Putative uncharacterized protein; n=3; ... 34 3.1
UniRef50_O67727 Cluster: ATP-dependent dsDNA exonuclease; n=1; A... 33 4.2
UniRef50_O26641 Cluster: DNA double-strand break repair protein ... 33 5.5
UniRef50_Q9HRW4 Cluster: DNA double-strand break repair protein ... 33 5.5
UniRef50_A7EZJ7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q2S4Q6 Cluster: Nuclease SbcCD, D subunit subfamily, pu... 32 9.6
UniRef50_Q21FY1 Cluster: Aminoglycoside phosphotransferase; n=1;... 32 9.6
UniRef50_A3M5K7 Cluster: Putative hydrolase; n=1; Acinetobacter ... 32 9.6
UniRef50_Q2QUC2 Cluster: Retrotransposon protein, putative, uncl... 32 9.6
UniRef50_Q4Y8G5 Cluster: Putative uncharacterized protein; n=1; ... 32 9.6
UniRef50_A2ELA1 Cluster: Putative uncharacterized protein; n=1; ... 32 9.6
>UniRef50_Q9GZJ8 Cluster: Mre11; n=1; Bombyx mori|Rep: Mre11 -
Bombyx mori (Silk moth)
Length = 610
Score = 184 bits (447), Expect = 2e-45
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILS 433
LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILS
Sbjct: 63 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILS 122
Query: 434 IHGNHDDPVGQGSVSSLDILSITGLL 511
IHGNHDDPVGQGSVSSLDILSITGL+
Sbjct: 123 IHGNHDDPVGQGSVSSLDILSITGLV 148
Score = 131 bits (317), Expect = 1e-29
Identities = 62/62 (100%), Positives = 62/62 (100%)
Frame = +3
Query: 69 MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 248
MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG
Sbjct: 1 MIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 60
Query: 249 GD 254
GD
Sbjct: 61 GD 62
Score = 71.7 bits (168), Expect = 1e-11
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
++NYFGKWTDYTHVRISPVLLQKGLTRLA L+ LKDQ
Sbjct: 147 LVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQ 185
>UniRef50_Q54BN2 Cluster: DNA repair exonuclease; n=1; Dictyostelium
discoideum AX4|Rep: DNA repair exonuclease -
Dictyostelium discoideum AX4
Length = 689
Score = 119 bits (287), Expect = 5e-26
Identities = 53/89 (59%), Positives = 67/89 (75%), Gaps = 3/89 (3%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR---TVNYEDPNLNISYP 424
LF KPS +C+++ E+ RKYCLGD PV I+ LSDQ NFS TVNYEDPN NIS P
Sbjct: 91 LFHDNKPSRSCLYRTMELFRKYCLGDSPVRIQFLSDQSVNFSNQFHTVNYEDPNFNISLP 150
Query: 425 ILSIHGNHDDPVGQGSVSSLDILSITGLL 511
I SIHGNHDDP G+G +++LD+LS++ L+
Sbjct: 151 IFSIHGNHDDPTGEGGLAALDLLSVSNLV 179
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/61 (54%), Positives = 44/61 (72%)
Frame = +3
Query: 111 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDCLIKLNLLSIVC 290
+RIL+A+D HLG++E DP+RG+DSF +FEE+L A VD++LLGGD L N S C
Sbjct: 43 MRILVATDNHLGYLERDPIRGDDSFNSFEEILKYAHTLKVDMVLLGGD-LFHDNKPSRSC 101
Query: 291 L 293
L
Sbjct: 102 L 102
Score = 36.7 bits (81), Expect = 0.45
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
++NYFGK D + + P+LL KG T++A L ++D+
Sbjct: 178 LVNYFGKTEDIDDITVYPLLLGKGETKIAIYGLGNIRDE 216
>UniRef50_Q9XYZ4 Cluster: CG16928-PA; n=5; Diptera|Rep: CG16928-PA -
Drosophila melanogaster (Fruit fly)
Length = 620
Score = 113 bits (271), Expect = 4e-24
Identities = 52/90 (57%), Positives = 69/90 (76%), Gaps = 4/90 (4%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNF----SRTVNYEDPNLNISY 421
LF A PS N + KC E++R+Y GD+PVS+E+LSDQ + F +++VNYEDPNLNI+
Sbjct: 63 LFHDAVPSQNALHKCIELLRRYTFGDRPVSLEILSDQGQCFHNAVNQSVNYEDPNLNIAI 122
Query: 422 PILSIHGNHDDPVGQGSVSSLDILSITGLL 511
P+ SIHGNHDDP G G +SSLD+LS +GL+
Sbjct: 123 PVFSIHGNHDDPSGFGRLSSLDLLSTSGLV 152
Score = 76.2 bits (179), Expect = 6e-13
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = +3
Query: 102 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
D+ +RIL+A+D HLG+ E D VRGEDSF AFEE+L LAV DVD+ILLGGD
Sbjct: 12 DNVIRILVATDNHLGYGEKDAVRGEDSFTAFEEILELAVSEDVDMILLGGD 62
Score = 48.4 bits (110), Expect = 1e-04
Identities = 20/38 (52%), Positives = 29/38 (76%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKD 618
++NYFG+WTD T V ISPVL++KG ++LA L+ + D
Sbjct: 151 LVNYFGRWTDLTQVEISPVLMRKGESQLALYGLSHIHD 188
>UniRef50_UPI00015B5FB8 Cluster: PREDICTED: similar to meiotic
recombination repair protein 11 (mre11); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to meiotic
recombination repair protein 11 (mre11) - Nasonia
vitripennis
Length = 664
Score = 112 bits (270), Expect = 6e-24
Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS----RTVNYEDPNLNISY 421
LF +AKP N + KC E++R YCL DKPV I+ L+D FS + VN+EDPNLN+
Sbjct: 84 LFHEAKPPHNVVMKCLELLRTYCLNDKPVKIQFLTDPEAVFSHCAQKVVNFEDPNLNVGI 143
Query: 422 PILSIHGNHDDPVGQGSVSSLDILSITGLL 511
P+ SIHGNHDDP G G+V S+D+LS TGL+
Sbjct: 144 PVFSIHGNHDDPTGYGAVGSMDVLSATGLI 173
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +3
Query: 102 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
++ +++LIA+DIHLG+ E R +DSF FEE+L A +VD++LLGGD
Sbjct: 34 ENIMKVLIATDIHLGY-EQTTKREDDSFRTFEEILQYARDHEVDMVLLGGD 83
Score = 52.0 bits (119), Expect = 1e-05
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
+INYFGKWTD T V I+P+L++KG+T +A L+ + DQ
Sbjct: 172 LINYFGKWTDVTQVSIAPLLIRKGVTTIALYGLSYMNDQ 210
>UniRef50_UPI0000D566D3 Cluster: PREDICTED: similar to CG16928-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG16928-PA - Tribolium castaneum
Length = 555
Score = 111 bits (268), Expect = 1e-23
Identities = 50/88 (56%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNF--SRTVNYEDPNLNISYPI 427
LF +A+P+ +C+ K E+IRKYC GDKPV IE SD +F + +VNYEDPN+N+S PI
Sbjct: 57 LFHEARPTPHCIKKTIELIRKYCFGDKPVEIEFFSDPSLHFPGNASVNYEDPNINVSIPI 116
Query: 428 LSIHGNHDDPVGQGSVSSLDILSITGLL 511
SIHGNHDDP G+ VS+LD+ S GL+
Sbjct: 117 FSIHGNHDDPTGKNHVSALDLFSSMGLV 144
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = +3
Query: 96 SPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
S +T RIL+A+D+HLG+ N+ +R D+F FEE+L +A + VD ILLGGD
Sbjct: 4 SEANTFRILLATDLHLGYGLNNSIRENDTFRTFEEILQIANKEKVDFILLGGD 56
Score = 46.8 bits (106), Expect = 4e-04
Identities = 18/39 (46%), Positives = 30/39 (76%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
++NYFG+W D T V I+P+LL+KG ++LA L+ ++D+
Sbjct: 143 LVNYFGRWDDVTKVEINPILLKKGDSKLALYGLSHIRDE 181
>UniRef50_P49959 Cluster: Double-strand break repair protein MRE11A;
n=42; Deuterostomia|Rep: Double-strand break repair
protein MRE11A - Homo sapiens (Human)
Length = 708
Score = 105 bits (251), Expect = 1e-21
Identities = 48/90 (53%), Positives = 62/90 (68%), Gaps = 4/90 (4%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISY 421
LF + KPS + C E++RKYC+GD+PV E+LSDQ NF + VNY+D NLNIS
Sbjct: 61 LFHENKPSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISI 120
Query: 422 PILSIHGNHDDPVGQGSVSSLDILSITGLL 511
P+ SIHGNHDDP G ++ +LDILS G +
Sbjct: 121 PVFSIHGNHDDPTGADALCALDILSCAGFV 150
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/55 (56%), Positives = 42/55 (76%)
Frame = +3
Query: 90 AWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
A ++T +IL+A+DIHLGFME D VRG D+F+ +E+L LA + +VD ILLGGD
Sbjct: 6 ALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGD 60
Score = 36.3 bits (80), Expect = 0.59
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 508 INYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
+N+FG+ + ISPVLLQKG T++A L + D+
Sbjct: 150 VNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIPDE 187
>UniRef50_UPI0000DB6F19 Cluster: PREDICTED: similar to meiotic
recombination 11 CG16928-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to meiotic recombination 11
CG16928-PA - Apis mellifera
Length = 501
Score = 104 bits (249), Expect = 2e-21
Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 4/90 (4%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS----RTVNYEDPNLNISY 421
LF KPS + +C E++RKYCLG K + I+ LSD F +TVNYEDPNLNIS
Sbjct: 69 LFHDTKPSQTAILRCMELLRKYCLGTKEIKIQFLSDPEVIFRHCAYKTVNYEDPNLNISM 128
Query: 422 PILSIHGNHDDPVGQGSVSSLDILSITGLL 511
PI SIHGNHDDP G++ S+D+LS++GL+
Sbjct: 129 PIFSIHGNHDDP-SFGAIGSMDLLSVSGLI 157
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Frame = +3
Query: 60 SKIMIENDISAWSPDDTLRILIASDIHLGFMENDP--VRGEDSFIAFEEVLSLAVQCDVD 233
S I N +PDD+++ILIA+DIHLGF N + EDSFI FEE+L + +VD
Sbjct: 2 SSTPINNKNEKRNPDDSIKILIATDIHLGFEYNKKRGQQSEDSFITFEEILQYGKEYEVD 61
Query: 234 LILLGGD 254
ILLGGD
Sbjct: 62 FILLGGD 68
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
+INYFGKWTD T + I P++++KG T +A L+ + DQ
Sbjct: 156 LINYFGKWTDLTKINIPPLIIKKGETHIALYGLSYINDQ 194
>UniRef50_A7SIW1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 720
Score = 101 bits (241), Expect = 2e-20
Identities = 44/90 (48%), Positives = 62/90 (68%), Gaps = 4/90 (4%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISY 421
L+ + KPS + + RK+C+GD+ +E LSDQ NF+ VNYEDPNLN+S
Sbjct: 99 LYHENKPSRRTLHASMALFRKFCMGDRVCEVEFLSDQSINFANNRFPWVNYEDPNLNVSI 158
Query: 422 PILSIHGNHDDPVGQGSVSSLDILSITGLL 511
P+ SIHGNHDDP G+G++ +LD+LS+ GL+
Sbjct: 159 PVFSIHGNHDDPAGEGNLCALDLLSVCGLV 188
Score = 69.3 bits (162), Expect = 7e-11
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +3
Query: 105 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
+TL ILIA+D+HLG+ E D VRG DSF+ FEE L +A + +VD ILLGGD
Sbjct: 49 NTLSILIATDVHLGYAEKDQVRGNDSFVTFEETLQIAKKRNVDFILLGGD 98
Score = 39.5 bits (88), Expect = 0.063
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
++NYFG+ + +SP+LLQKG T+LA L ++D+
Sbjct: 187 LVNYFGRPASVDDITVSPLLLQKGATKLALYGLGSVRDE 225
>UniRef50_Q9UVN9 Cluster: Double-strand break repair protein MRE11;
n=2; Fungi/Metazoa group|Rep: Double-strand break repair
protein MRE11 - Coprinus cinereus (Inky cap fungus)
(Hormographiella aspergillata)
Length = 731
Score = 101 bits (241), Expect = 2e-20
Identities = 48/94 (51%), Positives = 67/94 (71%), Gaps = 8/94 (8%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSD----QIKNFS-RTVNYEDPNLNIS 418
LF + KPS +C+++ ++R+Y LGDKP+ +ELLSD + FS +NYEDPN NIS
Sbjct: 71 LFHENKPSRDCLYQTLALLREYTLGDKPIQVELLSDPDEGKAAGFSFPAINYEDPNFNIS 130
Query: 419 YPILSIHGNHDDPVG---QGSVSSLDILSITGLL 511
P+ SIHGNHDDP G G++ +LD+LS++GLL
Sbjct: 131 IPVFSIHGNHDDPQGPGVNGALCALDVLSVSGLL 164
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/71 (49%), Positives = 49/71 (69%)
Frame = +3
Query: 81 DISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDCL 260
+I P+DT++IL+A+D H+G++E DP+RG+DS F E+L LAV+ +VD ILL GD L
Sbjct: 13 NIETADPEDTIKILLATDNHIGYLERDPIRGQDSINTFREILQLAVKNEVDFILLAGD-L 71
Query: 261 IKLNLLSIVCL 293
N S CL
Sbjct: 72 FHENKPSRDCL 82
>UniRef50_Q9XGM2 Cluster: Double-strand break repair protein MRE11;
n=14; Magnoliophyta|Rep: Double-strand break repair
protein MRE11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 720
Score = 99.1 bits (236), Expect = 7e-20
Identities = 44/89 (49%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYP 424
LF + KPS + K EI+R++CL DKPV +++SDQ NF VNYEDP+ N+ P
Sbjct: 58 LFHENKPSRTTLVKAIEILRRHCLNDKPVQFQVVSDQTVNFQNAFGQVNYEDPHFNVGLP 117
Query: 425 ILSIHGNHDDPVGQGSVSSLDILSITGLL 511
+ SIHGNHDDP G ++S++DILS L+
Sbjct: 118 VFSIHGNHDDPAGVDNLSAIDILSACNLV 146
Score = 69.3 bits (162), Expect = 7e-11
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = +3
Query: 105 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
DTLR+L+A+D HLG+ME D +R DSF AFEE+ S+A + VD +LLGGD
Sbjct: 8 DTLRVLVATDCHLGYMEKDEIRRHDSFKAFEEICSIAEEKQVDFLLLGGD 57
>UniRef50_A1CU25 Cluster: Meiotic recombination protein Mre11; n=14;
Pezizomycotina|Rep: Meiotic recombination protein Mre11
- Aspergillus clavatus
Length = 816
Score = 98.7 bits (235), Expect = 1e-19
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYP 424
LF + KPS M++ IR CLGDKP +E+LSD +NF VNYED ++N++ P
Sbjct: 75 LFHENKPSRKSMYQVMRSIRMNCLGDKPCELEMLSDASENFQGAFNHVNYEDLDINVAIP 134
Query: 425 ILSIHGNHDDPVGQGSVSSLDILSITGLL 511
I SIHGNHDDP G+G +++LD+L ++GLL
Sbjct: 135 IFSIHGNHDDPSGEGHLAALDLLQVSGLL 163
Score = 65.7 bits (153), Expect = 8e-10
Identities = 27/50 (54%), Positives = 41/50 (82%)
Frame = +3
Query: 105 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
+T+RIL+A+D H+G+ E DP+RG+DS+ +F EV+ LA + DVD++LL GD
Sbjct: 25 ETIRILVATDNHVGYNERDPIRGDDSWKSFHEVMCLARERDVDMVLLAGD 74
Score = 38.7 bits (86), Expect = 0.11
Identities = 15/39 (38%), Positives = 28/39 (71%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
++NY+G+ + ++ I PVLLQKG T+LA ++ ++D+
Sbjct: 162 LLNYYGRTPESDNIHIKPVLLQKGRTKLALYGMSNVRDE 200
>UniRef50_Q5KHA6 Cluster: Meiotic DNA double-strand break
processing-related protein, putative; n=3; Fungi/Metazoa
group|Rep: Meiotic DNA double-strand break
processing-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 721
Score = 95.9 bits (228), Expect = 7e-19
Identities = 46/94 (48%), Positives = 66/94 (70%), Gaps = 8/94 (8%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKN----FS-RTVNYEDPNLNIS 418
LF + +PS CM + ++R++ LGDKP+ ELLSD + FS VNYEDPN+NI+
Sbjct: 81 LFHENRPSRTCMHQTIALLREFTLGDKPIEFELLSDPMDGSTPGFSFPAVNYEDPNINIA 140
Query: 419 YPILSIHGNHDDPVG---QGSVSSLDILSITGLL 511
P+ SIHGNHDDP G +G++ +LD+LS++G+L
Sbjct: 141 IPVFSIHGNHDDPQGTGPEGALCALDVLSVSGVL 174
Score = 65.3 bits (152), Expect = 1e-09
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Frame = +3
Query: 75 ENDISAWSPD--DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLG 248
E +S PD + RILIA+D H+G+ E DPVRG+DS F E+L LA DVD ILL
Sbjct: 19 EPPLSIVEPDLENCFRILIATDNHIGYAEKDPVRGQDSINTFREILELARDHDVDFILLA 78
Query: 249 GDCLIKLNLLSIVCLN 296
GD L N S C++
Sbjct: 79 GD-LFHENRPSRTCMH 93
>UniRef50_Q4P5A9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 883
Score = 95.5 bits (227), Expect = 9e-19
Identities = 47/95 (49%), Positives = 67/95 (70%), Gaps = 9/95 (9%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQI------KNFSRTVNYEDPNLNI 415
LF + KPS + + + ++R+Y LGDKP+S+ELLSD K F +NYEDPNLN+
Sbjct: 159 LFHENKPSRDTLHQTMALLRQYTLGDKPISVELLSDPNDGALPGKRFP-AINYEDPNLNV 217
Query: 416 SYPILSIHGNHDDPVG---QGSVSSLDILSITGLL 511
+ P+ SIHGNHDDP G G++S+LD+LS++GL+
Sbjct: 218 AIPVFSIHGNHDDPQGVGETGALSALDLLSVSGLI 252
Score = 80.2 bits (189), Expect = 4e-14
Identities = 36/56 (64%), Positives = 46/56 (82%)
Frame = +3
Query: 87 SAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
+A S DD ++I++A+D H+G+ME DPVRG+DS FEE+L LAVQ DVDLILLGGD
Sbjct: 103 AAQSEDDHIKIMLATDNHIGYMERDPVRGQDSIRTFEEILQLAVQHDVDLILLGGD 158
Score = 33.1 bits (72), Expect = 5.5
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +1
Query: 544 VRISPVLLQKGLTRLASMDLAILKDQ 621
+RI PVLLQKG TRLA + +KD+
Sbjct: 285 IRIKPVLLQKGETRLALYGMGNIKDE 310
>UniRef50_Q586P4 Cluster: Endo/exonuclease Mre11; n=3; Trypanosoma
brucei|Rep: Endo/exonuclease Mre11 - Trypanosoma brucei
Length = 763
Score = 94.7 bits (225), Expect = 2e-18
Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 4/89 (4%)
Frame = +2
Query: 257 FDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR----TVNYEDPNLNISYP 424
F KPS+ C+ + + ++R Y LGDKP+S LLSD +NF N++DPN+N++ P
Sbjct: 88 FHDNKPSLGCLARTSSLLRSYVLGDKPISFTLLSDPKRNFPTHPVPLANFQDPNINVALP 147
Query: 425 ILSIHGNHDDPVGQGSVSSLDILSITGLL 511
I IHGNHDDPV G SS+DILS GL+
Sbjct: 148 IFMIHGNHDDPV--GGTSSIDILSTAGLV 174
Score = 53.6 bits (123), Expect = 4e-06
Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA-VQCDVDLILLGGDCLIKLNLLSI 284
T + L+ SD HLG+ E D RG+DSF FEE L A ++ +VD ILL GD N S+
Sbjct: 37 TFKFLVTSDNHLGYQERDSRRGDDSFTTFEECLRAARLEHEVDAILLAGD-FFHDNKPSL 95
Query: 285 VCL 293
CL
Sbjct: 96 GCL 98
>UniRef50_Q09683 Cluster: DNA repair protein rad32; n=1;
Schizosaccharomyces pombe|Rep: DNA repair protein rad32
- Schizosaccharomyces pombe (Fission yeast)
Length = 649
Score = 93.5 bits (222), Expect = 4e-18
Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT----VNYEDPNLNISY 421
+F KPS +++ +R CLGDKP +ELLSD T +NY DPN+N++
Sbjct: 66 IFHDNKPSRKALYQALRSLRLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAI 125
Query: 422 PILSIHGNHDDPVGQGSVSSLDILSITGLL 511
P+ SIHGNHDDP G G S+LDIL +TGL+
Sbjct: 126 PVFSIHGNHDDPSGDGRYSALDILQVTGLV 155
Score = 72.9 bits (171), Expect = 6e-12
Identities = 31/51 (60%), Positives = 43/51 (84%)
Frame = +3
Query: 102 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
++T+RILI+SD H+G+ E DPVRG DSF++F E+L +A + DVD+ILLGGD
Sbjct: 15 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGD 65
Score = 40.3 bits (90), Expect = 0.036
Identities = 15/39 (38%), Positives = 29/39 (74%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
++NYFG+ + ++ +SP+LLQKG T+LA ++ ++D+
Sbjct: 154 LVNYFGRVPENDNIVVSPILLQKGFTKLALYGISNVRDE 192
>UniRef50_Q9C291 Cluster: Double-strand break repair protein mus-23;
n=5; Pezizomycotina|Rep: Double-strand break repair
protein mus-23 - Neurospora crassa
Length = 760
Score = 93.5 bits (222), Expect = 4e-18
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYP 424
LF + KPS M++ +RK+CLG KP +E LSD + F VNYEDP++N++ P
Sbjct: 78 LFHENKPSRKSMYQVMRSLRKHCLGMKPCELEFLSDAAEVFEGAFPFVNYEDPDINVAIP 137
Query: 425 ILSIHGNHDDPVGQGSVSSLDILSITGLL 511
+ SIHGNHDDP G G SLD+L GL+
Sbjct: 138 VFSIHGNHDDPSGDGHYCSLDLLQAAGLV 166
Score = 62.9 bits (146), Expect = 6e-09
Identities = 25/50 (50%), Positives = 40/50 (80%)
Frame = +3
Query: 105 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
DT+RIL+++D H+G+ E PVR +DS+ F+E++ +A + DVD++LLGGD
Sbjct: 28 DTIRILVSTDNHVGYAERHPVRKDDSWRTFDEIMQIAKKQDVDMVLLGGD 77
Score = 39.1 bits (87), Expect = 0.084
Identities = 14/39 (35%), Positives = 28/39 (71%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
++NYFG+ + ++ + P+LLQKG T++A L+ ++D+
Sbjct: 165 LVNYFGRVPEADNIHVKPILLQKGRTKMALYGLSNVRDE 203
>UniRef50_A5E785 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 669
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/89 (46%), Positives = 61/89 (68%), Gaps = 3/89 (3%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR---TVNYEDPNLNISYP 424
LF KP+ M+ + +R C+GD+P +ELLS+ + S VNYEDPNLNIS P
Sbjct: 62 LFHINKPTKKSMYHVMKSLRANCMGDRPCELELLSEPGETMSNGFDEVNYEDPNLNISVP 121
Query: 425 ILSIHGNHDDPVGQGSVSSLDILSITGLL 511
+ +I+GNHDD G+G +S+LD+L+++GL+
Sbjct: 122 VFAINGNHDDATGEGMLSALDVLAVSGLI 150
Score = 66.5 bits (155), Expect = 5e-10
Identities = 27/50 (54%), Positives = 40/50 (80%)
Frame = +3
Query: 105 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
DTL+IL+ +D H+G++ENDP+RG+DS+ F+E+ LA DVD+I+ GGD
Sbjct: 12 DTLKILLTTDNHVGYLENDPIRGDDSWKTFDEITRLARDHDVDMIIQGGD 61
Score = 36.7 bits (81), Expect = 0.45
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 505 VINYFGKWTDYTH--VRISPVLLQKGLTRLASMDLAILKDQ 621
+INYFGK D H + P+LLQKG T+ A ++ ++D+
Sbjct: 149 LINYFGKTRDNNHDTYLVKPILLQKGSTKFALYGMSNVRDE 189
>UniRef50_Q6BL74 Cluster: Debaryomyces hansenii chromosome F of
strain CBS767 of Debaryomyces hansenii; n=3;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
F of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 688
Score = 90.2 bits (214), Expect = 3e-17
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR---TVNYEDPNLNISYP 424
LF KPS M+K + +R CLGD+P +ELL D + TVNYEDPN+NIS P
Sbjct: 62 LFHINKPSKKSMYKVIKSLRTNCLGDRPCELELLGDPSMALGKDVDTVNYEDPNINISVP 121
Query: 425 ILSIHGNHDDPVGQGSVSSLDILSITGLL 511
+ +I GNHDD G+G + LD+LS +GL+
Sbjct: 122 VFAISGNHDDATGEGFLLPLDLLSASGLI 150
Score = 70.9 bits (166), Expect = 2e-11
Identities = 31/53 (58%), Positives = 42/53 (79%)
Frame = +3
Query: 96 SPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
S DT+RILI +D H+G+ ENDP+RG+DS+ FEE+ S+A + DVD+IL GGD
Sbjct: 9 SGPDTIRILITTDNHVGYNENDPIRGDDSWKTFEEITSIAKEKDVDMILQGGD 61
Score = 35.9 bits (79), Expect = 0.78
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
+IN+FGK + + +SP++ QKG ++LA LA ++D+
Sbjct: 149 LINHFGKVPNNEELTVSPLIFQKGASKLALYGLANVRDE 187
>UniRef50_A4HFW3 Cluster: Endo/exonuclease Mre11, putative; n=5;
Trypanosomatidae|Rep: Endo/exonuclease Mre11, putative -
Leishmania braziliensis
Length = 863
Score = 88.2 bits (209), Expect = 1e-16
Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSR----TVNYEDPNLNISY 421
LF + KPS+ C+ + + RKY G+K V LLSD NF N++DPN+N++
Sbjct: 55 LFHENKPSLGCLVRACSLFRKYVFGNKTVPFSLLSDAATNFPTHALPMANFQDPNINVAL 114
Query: 422 PILSIHGNHDDPVGQGSVSSLDILSITGLL 511
P+ +IHGNHDDPV G SSLD+L+ G L
Sbjct: 115 PVFAIHGNHDDPV--GGTSSLDLLATNGYL 142
Score = 62.5 bits (145), Expect = 8e-09
Identities = 34/63 (53%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLA-VQCDVDLILLGGDCLIKLNLLSI 284
T + L+ +D HLGF E DP RG+DSF FEEVL A + DVD +LLGGD L N S+
Sbjct: 5 TFKFLLTTDNHLGFAERDPRRGDDSFTTFEEVLRAARTEHDVDAMLLGGD-LFHENKPSL 63
Query: 285 VCL 293
CL
Sbjct: 64 GCL 66
Score = 33.1 bits (72), Expect = 5.5
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 508 INYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
+NYFG T + + PVLL+KG T +A L ++D+
Sbjct: 142 LNYFGHVTSLDDIILEPVLLRKGSTFIALYGLGNVRDE 179
>UniRef50_Q6ZBS2 Cluster: Putative DNA repair and meiosis protein
Mre11; n=2; Oryza sativa|Rep: Putative DNA repair and
meiosis protein Mre11 - Oryza sativa subsp. japonica
(Rice)
Length = 615
Score = 85.8 bits (203), Expect = 7e-16
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQ---IKNFSRTVNYEDPNLNISYP 424
LF + KPS++ + K EIIR YCL D V +++SDQ ++N VN+EDPN NI P
Sbjct: 64 LFHENKPSISTLVKSMEIIRSYCLNDHQVQFQVVSDQAACLQNRFGRVNFEDPNFNIGLP 123
Query: 425 ILSIHGNHDDPVGQGSVSSLDILS 496
+ ++HG HD P G +S+ DILS
Sbjct: 124 VFTVHGTHDGPAGVDGLSATDILS 147
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Frame = +3
Query: 87 SAWSPDDT--LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
++W ++ LRIL+A+D HLG++E D +R DSF FEE+ SLAV VD ILLGG+
Sbjct: 6 ASWDEEENSMLRILVATDCHLGYLEKDEIRRFDSFDTFEEICSLAVINKVDFILLGGN 63
>UniRef50_P32829 Cluster: Double-strand break repair protein MRE11;
n=9; Saccharomycetales|Rep: Double-strand break repair
protein MRE11 - Saccharomyces cerevisiae (Baker's yeast)
Length = 692
Score = 83.4 bits (197), Expect = 4e-15
Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSD--QIKNFSR--TVNYEDPNLNISY 421
LF KPS +++ + +R C+GDKP +ELLSD Q+ ++ VNYEDPN NIS
Sbjct: 57 LFHVNKPSKKSLYQVLKTLRLCCMGDKPCELELLSDPSQVFHYDEFTNVNYEDPNFNISI 116
Query: 422 PILSIHGNHDDPVGQGSVSSLDILSITGLL 511
P+ I GNHDD G + +DIL TGL+
Sbjct: 117 PVFGISGNHDDASGDSLLCPMDILHATGLI 146
Score = 60.5 bits (140), Expect = 3e-08
Identities = 27/53 (50%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = +3
Query: 99 PD-DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
PD DT+RILI +D H+G+ ENDP+ G+DS+ F EV+ LA +VD+++ GD
Sbjct: 4 PDPDTIRILITTDNHVGYNENDPITGDDSWKTFHEVMMLAKNNNVDMVVQSGD 56
Score = 38.3 bits (85), Expect = 0.15
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
+IN+FGK + +++ P+L QKG T+LA LA ++D+
Sbjct: 145 LINHFGKVIESDKIKVVPLLFQKGSTKLALYGLAAVRDE 183
>UniRef50_Q23255 Cluster: Double-strand break repair protein mre-11;
n=2; Caenorhabditis|Rep: Double-strand break repair
protein mre-11 - Caenorhabditis elegans
Length = 728
Score = 82.6 bits (195), Expect = 7e-15
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTV----NYEDPNLNISY 421
LF + PS + T+++R+YCL P+++E LSD NF+++V NY D NLN+
Sbjct: 114 LFHENNPSREVQHRVTQLLRQYCLNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGL 173
Query: 422 PILSIHGNHDDPVGQGSVSSLDILSITGLL 511
PI +IHGNHDD G+G +++LD+L +GL+
Sbjct: 174 PIFTIHGNHDDLSGKG-LTALDLLHESGLV 202
Score = 53.2 bits (122), Expect = 5e-06
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +3
Query: 102 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
+D ++IL+A+DIH G+ EN D+ FEEVL +A + VD+ILLGGD
Sbjct: 63 EDIIKILVATDIHCGYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGD 113
Score = 33.9 bits (74), Expect = 3.1
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKD 618
++N FGK ++ +SP+LL+KG TRLA + +D
Sbjct: 201 LVNLFGKHSNIQEFIVSPILLRKGETRLALYGIGSQRD 238
>UniRef50_UPI00015B5FB6 Cluster: PREDICTED: similar to
endo/exonuclease Mre11; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to endo/exonuclease Mre11 - Nasonia
vitripennis
Length = 450
Score = 81.0 bits (191), Expect = 2e-14
Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFS----RTVNYEDPNLNISY 421
LF +A P +N + +C ++RKYCL DKP I+ L+D F+ + N++DP LNI
Sbjct: 74 LFYEANPPLNVITRCISLLRKYCLSDKPAKIDCLTDPEWIFNHCPDKIANFKDPKLNIGM 133
Query: 422 PILSIHGNHDDPVGQGSVSSLDILSITGLL 511
PI +IHG+ D P+ G V +LD+L+ TGL+
Sbjct: 134 PIFAIHGHRDAPL-FGPVGALDLLAATGLI 162
Score = 44.4 bits (100), Expect = 0.002
Identities = 22/57 (38%), Positives = 36/57 (63%)
Frame = +3
Query: 102 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDCLIKLN 272
++ +++L+A+DI+LG+ E R +DSF FEE+L A +VD IL G+ + N
Sbjct: 24 ENIIQVLVAADINLGY-EQTVKREDDSFRTFEEILIYARDYEVDAILFAGNLFYEAN 79
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKD 618
+INYFGKW D + I PVLL+KG+T LA L + D
Sbjct: 161 LINYFGKWPDKDKISIPPVLLRKGITTLALYGLNHMND 198
>UniRef50_Q016A4 Cluster: Mre11 protein; n=3; Ostreococcus|Rep:
Mre11 protein - Ostreococcus tauri
Length = 1229
Score = 80.2 bits (189), Expect = 4e-14
Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 14/100 (14%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTV--------------N 391
+FD KPS + +C +++R+ GD V IE+LSD +NF V N
Sbjct: 526 VFDVNKPSRETLVRCMDVLREATRGDGAVRIEVLSDTKENFPHRVHSPDGDVRPHAGIVN 585
Query: 392 YEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLL 511
YEDP+ N+ P+ SIHGNHDDP G+ ++S++D+L+ G++
Sbjct: 586 YEDPHTNVELPVFSIHGNHDDPAGERNLSAMDVLASAGVV 625
Score = 56.4 bits (130), Expect = 5e-07
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +3
Query: 99 PD-DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
PD +TLR+L+A+D HLGF E D VR +D+F AFEE+ A + D + + GD
Sbjct: 473 PDPNTLRVLVATDTHLGFAERDAVRKDDAFAAFEEIFRHAREQKCDCVFMAGD 525
>UniRef50_A5YZR9 Cluster: MRE11B; n=2; Magnoliophyta|Rep: MRE11B -
Zea mays (Maize)
Length = 672
Score = 79.0 bits (186), Expect = 8e-14
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQ---IKNFSRTVNYEDPNLNISYP 424
LF + KPS + + K EI+R+YC+ D PV +++SDQ ++N VNYEDPN I P
Sbjct: 133 LFHENKPSNSTLVKAIEILRRYCMNDCPVQFQVISDQAASLQNRFCQVNYEDPNYKIGLP 192
Query: 425 ILSIHGNHDDPVGQGSVSSLDILSITGLL 511
+ +IHG+ D P G ++S DIL+ L
Sbjct: 193 VFTIHGDQDYPTGTDNLSVNDILTAGNFL 221
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/50 (56%), Positives = 39/50 (78%)
Frame = +3
Query: 105 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
++LR+L+A+D HLG++E D VRG DSF FEE+ SLAV+ VD +LL G+
Sbjct: 83 NSLRVLVATDCHLGYLEKDEVRGFDSFDTFEEICSLAVKNKVDFLLLCGN 132
>UniRef50_Q6CEM3 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 701
Score = 78.2 bits (184), Expect = 1e-13
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYP 424
LF KPS M++ +R C G++P +ELLSD +T +NYEDPN+N+S P
Sbjct: 57 LFHINKPSRKSMYQVIRSLRMNCYGERPCELELLSDPTLALDQTFNHLNYEDPNINVSVP 116
Query: 425 ILSIHGNHDDPVGQGSVSSLDILSITGLL 511
+ +I GNHDD G + D+L+ TGL+
Sbjct: 117 VFAISGNHDDSGGDAMLCPNDVLAATGLI 145
Score = 61.7 bits (143), Expect = 1e-08
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +3
Query: 105 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
DT+RILI +D H+G+ E DP+RG+DS+ F E++ LA DVD++L GD
Sbjct: 7 DTIRILITTDNHVGYNEQDPIRGDDSWKTFHEIMGLARTEDVDMVLQAGD 56
Score = 35.9 bits (79), Expect = 0.78
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
+IN+FG+ T + ++P+L +KG T LA LA ++D+
Sbjct: 144 LINHFGRVTQNDQITVTPLLFRKGSTNLALYGLANVRDE 182
>UniRef50_A5DLP0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 641
Score = 75.8 bits (178), Expect = 8e-13
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRT---VNYEDPNLNISYP 424
LF KPS +++ + +R CLGD+P +EL+SD + VNYED N NI P
Sbjct: 62 LFHVNKPSKKSLYQVIKSLRSNCLGDRPCELELISDPSMALTLDFPGVNYEDENFNIGVP 121
Query: 425 ILSIHGNHDDPVGQGSVSSLDILSITGLL 511
+ +I GNHDD G + LDIL+ +GL+
Sbjct: 122 VFAISGNHDDATGDSLLLPLDILAASGLV 150
Score = 60.9 bits (141), Expect = 2e-08
Identities = 25/50 (50%), Positives = 38/50 (76%)
Frame = +3
Query: 105 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
+T+ ILI +D H+G+ ENDP+RG+DS FEE+ +A + DVD+++ GGD
Sbjct: 12 NTISILITTDNHVGYHENDPIRGDDSGKTFEEITRIAKERDVDMVVQGGD 61
Score = 36.7 bits (81), Expect = 0.45
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
++NYFGK + + ++P+L +KG T+LA + +KD+
Sbjct: 149 LVNYFGKVVNNEDITVAPLLFKKGTTKLALYGIGNVKDE 187
>UniRef50_Q22G12 Cluster: Ser/Thr protein phosphatase family
protein; n=1; Tetrahymena thermophila SB210|Rep: Ser/Thr
protein phosphatase family protein - Tetrahymena
thermophila SB210
Length = 884
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = +3
Query: 102 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDCLIKLNLLS 281
++T +IL+A+D H+G+ ENDP+RG DSF AFEEVL +A VD +LLGGD + N
Sbjct: 21 ENTFKILVATDNHVGYKENDPIRGNDSFEAFEEVLKIAKSEKVDFLLLGGDLFHETNPSQ 80
Query: 282 IVCLNVQK*SANIVLG 329
+ N VLG
Sbjct: 81 QCLYKMLNLLGNYVLG 96
Score = 62.5 bits (145), Expect = 8e-09
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILS 433
LF + PS C++K ++ Y LGD E+L I N++ VN++D NLNI PI
Sbjct: 72 LFHETNPSQQCLYKMLNLLGNYVLGDG----EILYG-ISNYN-DVNFQDCNLNIELPIFV 125
Query: 434 IHGNHDDPVGQ-GSVSSLDILSITGLL 511
IHGNHD P + G++S +D+L T L
Sbjct: 126 IHGNHDYPSDEYGNLSVIDLLHATKYL 152
Score = 37.9 bits (84), Expect = 0.19
Identities = 13/38 (34%), Positives = 27/38 (71%)
Frame = +1
Query: 508 INYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
+N+FGK+++ ++++P++ QKG T +A + LKD+
Sbjct: 152 LNHFGKFSNIEQIKVTPIIFQKGNTTVALYGIGYLKDK 189
>UniRef50_Q8SRV0 Cluster: DOUBLE-STRAND BREAK DNA REPAIR PROTEIN;
n=1; Encephalitozoon cuniculi|Rep: DOUBLE-STRAND BREAK
DNA REPAIR PROTEIN - Encephalitozoon cuniculi
Length = 567
Score = 68.5 bits (160), Expect = 1e-10
Identities = 33/86 (38%), Positives = 52/86 (60%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILS 433
LF + +PS +C+ + + R+YC+G++ + N + +N+ D N+ IS P++S
Sbjct: 49 LFHENRPSRSCLNRTIGLFRRYCIGNERSGLR------SNLA--LNFHDQNIGISIPVVS 100
Query: 434 IHGNHDDPVGQGSVSSLDILSITGLL 511
IHGNHDDP G VS +DIL GL+
Sbjct: 101 IHGNHDDPSGISMVSPIDILQSAGLV 126
Score = 60.1 bits (139), Expect = 4e-08
Identities = 32/62 (51%), Positives = 42/62 (67%)
Frame = +3
Query: 111 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDCLIKLNLLSIVC 290
++ILI SD HLG+ E+DPV +DS+ FEE+L +A + VDL+L GGD L N S C
Sbjct: 1 MKILITSDNHLGYRESDPVLLDDSYDTFEEILGIAQRERVDLVLQGGD-LFHENRPSRSC 59
Query: 291 LN 296
LN
Sbjct: 60 LN 61
>UniRef50_Q0MR25 Cluster: MRE11-like protein; n=1; Penicillium
marneffei|Rep: MRE11-like protein - Penicillium
marneffei
Length = 731
Score = 67.7 bits (158), Expect = 2e-10
Identities = 32/75 (42%), Positives = 49/75 (65%)
Frame = +3
Query: 105 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDCLIKLNLLSI 284
DT+RIL+++D H+G+ E DP+RG+DS+ F E++ LA + DVD++LL GD + N +
Sbjct: 14 DTIRILVSTDNHVGYNERDPIRGDDSWKTFHEIMCLAKERDVDMVLLAGDLFHENNHPAN 73
Query: 285 VCLNVQK*SANIVLG 329
C+ A IV G
Sbjct: 74 PCIKSCAPYAQIVWG 88
Score = 65.3 bits (152), Expect = 1e-09
Identities = 25/42 (59%), Positives = 36/42 (85%)
Frame = +2
Query: 386 VNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLL 511
VNYED ++N++ P+ SIHGNHDDP G+G +++LDIL ++GLL
Sbjct: 93 VNYEDLDINVAIPVFSIHGNHDDPSGEGHLAALDILQVSGLL 134
Score = 39.5 bits (88), Expect = 0.063
Identities = 15/39 (38%), Positives = 29/39 (74%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
++NY+G+ + ++++ PVLLQKG T+LA L+ ++D+
Sbjct: 133 LLNYYGRTPESDNIQVKPVLLQKGRTKLALYGLSNVRDE 171
>UniRef50_A3FQD2 Cluster: DNA repair and meiosis protein Mre11; n=2;
Cryptosporidium|Rep: DNA repair and meiosis protein
Mre11 - Cryptosporidium parvum Iowa II
Length = 513
Score = 66.5 bits (155), Expect = 5e-10
Identities = 30/69 (43%), Positives = 42/69 (60%)
Frame = +2
Query: 287 MFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQ 466
M+K IIR+YC+G+K + L+ Q + N+E + N+S P IHGNHDDP +
Sbjct: 1 MYKVMNIIREYCMGNKQIKFRALNRQDSSNVNGYNWEVGDANVSIPFFGIHGNHDDPGEE 60
Query: 467 GSVSSLDIL 493
G +S LDIL
Sbjct: 61 GLLSPLDIL 69
Score = 37.5 bits (83), Expect = 0.26
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 508 INYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
INY GK + ++ + PVLL+KG TRLA + ++D+
Sbjct: 75 INYIGKNNNVDNIEVFPVLLEKGSTRLAIYGIGNIRDE 112
>UniRef50_UPI000049A054 Cluster: DNA repair protein rad32; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DNA repair protein
rad32 - Entamoeba histolytica HM-1:IMSS
Length = 550
Score = 66.1 bits (154), Expect = 6e-10
Identities = 27/86 (31%), Positives = 51/86 (59%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILS 433
LF+ +P+ +C+ K +I+KYC+GD + + + S +N DP +N+ +P+ +
Sbjct: 51 LFNDLRPNKSCVSKTANLIKKYCIGDADIPYTIKDEA--ELSYPLNITDPYINVKHPLFT 108
Query: 434 IHGNHDDPVGQGSVSSLDILSITGLL 511
IHG +D+P G ++ +IL+ GL+
Sbjct: 109 IHGTNDEPSGYKLIAGSEILASCGLV 134
>UniRef50_Q7RBG7 Cluster: Rad32-related; n=6; Plasmodium
(Vinckeia)|Rep: Rad32-related - Plasmodium yoelii yoelii
Length = 1037
Score = 60.1 bits (139), Expect = 4e-08
Identities = 26/54 (48%), Positives = 40/54 (74%)
Frame = +3
Query: 105 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDCLIK 266
DTL+IL+ +D HLG+ EN+P++ +D+F FEE+L +A + +VD+IL GD K
Sbjct: 303 DTLKILLCTDNHLGYKENNPIQKKDTFNTFEEILFIAKKLNVDMILNSGDLFHK 356
Score = 35.5 bits (78), Expect = 1.0
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 416 SYPILSIHGNHDDPVGQGSVSSLDILSITGLL 511
S P +IHGNHD P + LDIL+I+ L+
Sbjct: 536 SIPFYTIHGNHDYPYSYDYICPLDILNISNLI 567
>UniRef50_A5K9T7 Cluster: DNA repair exonuclease, putative; n=1;
Plasmodium vivax|Rep: DNA repair exonuclease, putative -
Plasmodium vivax
Length = 1119
Score = 59.7 bits (138), Expect = 6e-08
Identities = 31/65 (47%), Positives = 43/65 (66%)
Frame = +3
Query: 72 IENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGG 251
I +S PD TL+IL+ +D HLG+ EN+ V+ ED+F +FEE+L +A +VDLIL G
Sbjct: 295 IRKSLSKNEPD-TLKILLCTDNHLGYKENNAVQKEDTFNSFEEILFVAKHLNVDLILNSG 353
Query: 252 DCLIK 266
D K
Sbjct: 354 DLFHK 358
Score = 33.1 bits (72), Expect = 5.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 422 PILSIHGNHDDPVGQGSVSSLDILSITGLL 511
P+ ++HGNHD P +S LDIL + L+
Sbjct: 549 PLFTMHGNHDYPYSCDYISPLDILHVGNLI 578
>UniRef50_Q4U965 Cluster: Double-strand break repair protein,
putative; n=2; Theileria|Rep: Double-strand break repair
protein, putative - Theileria annulata
Length = 870
Score = 59.3 bits (137), Expect = 7e-08
Identities = 30/72 (41%), Positives = 41/72 (56%)
Frame = +3
Query: 51 SCTSKIMIENDISAWSPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDV 230
S SK D+ D+ ++IL+ +D HLG+ E+DP RG DS FEE+L +A +V
Sbjct: 244 SDVSKEFEFKDLDESEDDNVVKILVFTDTHLGYKEDDPFRGNDSLNTFEELLFIAKHLEV 303
Query: 231 DLILLGGDCLIK 266
D IL GD K
Sbjct: 304 DFILHSGDLFDK 315
Score = 39.9 bits (89), Expect = 0.048
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 422 PILSIHGNHDDPVGQGSVSSLDILSITGLL 511
P IHGNHD+P Q S+S +DIL + GL+
Sbjct: 394 PFFVIHGNHDNPTYQHSLSPIDILDVAGLV 423
>UniRef50_Q86C23 Cluster: Mre11; n=2; Entamoeba histolytica|Rep:
Mre11 - Entamoeba histolytica
Length = 603
Score = 58.4 bits (135), Expect = 1e-07
Identities = 33/85 (38%), Positives = 43/85 (50%)
Frame = +2
Query: 257 FDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSI 436
FD PS C+ K E++RKY +G S ++ N + N N I YP+ I
Sbjct: 57 FDDQNPSKYCLTKTMELMRKYLMGKPKNSFDVAYTYEHN--QEDNGFSMNQGIKYPMYVI 114
Query: 437 HGNHDDPVGQGSVSSLDILSITGLL 511
HGNHD P G V+ LDIL GL+
Sbjct: 115 HGNHDIPSGIEHVAGLDILQTAGLV 139
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/50 (52%), Positives = 32/50 (64%)
Frame = +3
Query: 105 DTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
+T +ILI SD HLG E +D ++AFEE+L A Q DVDLIL GD
Sbjct: 6 NTFKILICSDTHLGAGEKSHCLKDDCYLAFEEILQQANQEDVDLILHSGD 55
Score = 33.1 bits (72), Expect = 5.5
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 529 TDYTHVRISPVLLQKGLTRLASMDLAILKDQ 621
TD T + +SP+LLQKG TR+A ++ K++
Sbjct: 155 TDQTILHLSPILLQKGTTRIALYGMSYKKNE 185
>UniRef50_A0DUM4 Cluster: Chromosome undetermined scaffold_64, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_64,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1041
Score = 57.2 bits (132), Expect = 3e-07
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILS 433
LF + P+ +C+ KC +I++++ GD I++ ++ + + N+ N N+ PI
Sbjct: 432 LFHEKHPTEHCLLKCVDILQRHVFGDNFGGIQM---EVNSLNYQPNFSCSNFNVQLPIFI 488
Query: 434 IHGNHDDPVGQ--GSVSSLDIL 493
I+GNHDD V + SVS LDIL
Sbjct: 489 INGNHDDIVTERNESVSILDIL 510
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Frame = +3
Query: 114 RILIASDIHLGFMEN---DPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
+ L+ASD HLG EN R +D+F AFEEVL +A Q +VD ++LGGD
Sbjct: 382 KFLVASDNHLGANENVGPKSNRYQDAFDAFEEVLQIASQQNVDFVILGGD 431
Score = 33.9 bits (74), Expect = 3.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 508 INYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKD 618
+NY GK TD ++V I P++L K ++A L +KD
Sbjct: 516 LNYIGKITDQSNVCIKPIVLVKNNQKIALYGLGYMKD 552
>UniRef50_Q8I263 Cluster: DNA repair exonuclease, putative; n=1;
Plasmodium falciparum 3D7|Rep: DNA repair exonuclease,
putative - Plasmodium falciparum (isolate 3D7)
Length = 1118
Score = 56.0 bits (129), Expect = 7e-07
Identities = 25/53 (47%), Positives = 39/53 (73%)
Frame = +3
Query: 108 TLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDCLIK 266
TL+IL+ +D HLG+ EN+ ++ +DSF +FEE+L +A + +VD+IL GD K
Sbjct: 350 TLKILLCTDNHLGYKENNSIQKKDSFNSFEEILFIAKKLNVDMILNSGDLFHK 402
Score = 35.9 bits (79), Expect = 0.78
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 422 PILSIHGNHDDPVGQGSVSSLDILSITGLL 511
P +IHGNHD P +S LDIL+I+ L+
Sbjct: 583 PFYTIHGNHDYPYSYEYISPLDILNISNLI 612
>UniRef50_A7AP02 Cluster: DNA repair protein (Mre11) family protein;
n=1; Babesia bovis|Rep: DNA repair protein (Mre11)
family protein - Babesia bovis
Length = 1040
Score = 53.2 bits (122), Expect = 5e-06
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = +3
Query: 111 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
LR +I +D HLG E DP+R DSF AF+EVL LA VD IL GD
Sbjct: 207 LRFMIFTDTHLGHKETDPIRENDSFNAFQEVLFLAKYLQVDGILHAGD 254
Score = 46.4 bits (105), Expect = 6e-04
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYC-----LGDKPVSIEL-LSDQIKNFSR---TVNYEDPN 406
LFD + PS + +++ E++R+YC P++I L S +++ ++ + + D
Sbjct: 255 LFDDSHPSRSVIYRTMELLRRYCRKSDLTSPLPLNIRLPKSCAVRSETKRLEALKFIDGT 314
Query: 407 LN--ISYPILSIHGNHDDPVGQGSVSSLDILSITGLL 511
+ P IHGNHD+P +S +D+L ++GL+
Sbjct: 315 ITKEARVPFFVIHGNHDNPTTMNGLSPIDLLDVSGLV 351
>UniRef50_A2ECB0 Cluster: Ser/Thr protein phosphatase, putative;
n=1; Trichomonas vaginalis G3|Rep: Ser/Thr protein
phosphatase, putative - Trichomonas vaginalis G3
Length = 562
Score = 53.2 bits (122), Expect = 5e-06
Identities = 28/85 (32%), Positives = 46/85 (54%)
Frame = +2
Query: 257 FDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSI 436
F++ PS + K +I+ ++ +G L S+ + S N+ +PN+NI P +
Sbjct: 58 FNERNPSRYAVIKTMKILDEFVIGQGNPPEILYSEGL---SSDPNWLNPNINIKIPFFCM 114
Query: 437 HGNHDDPVGQGSVSSLDILSITGLL 511
HGNHD P G GS S + +LS++ L
Sbjct: 115 HGNHDAPNGLGSTSPIQLLSVSKYL 139
Score = 46.0 bits (104), Expect = 7e-04
Identities = 26/78 (33%), Positives = 39/78 (50%)
Frame = +3
Query: 96 SPDDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDCLIKLNL 275
S DT +I I +D H+G+ E D + +DSF AF+E + A + D+IL GD + N
Sbjct: 4 SQQDTFKIAIFTDTHIGYDEQDAITEKDSFRAFKECVQNAHIQNADIILHAGDFFNERNP 63
Query: 276 LSIVCLNVQK*SANIVLG 329
+ K V+G
Sbjct: 64 SRYAVIKTMKILDEFVIG 81
>UniRef50_Q8PUY5 Cluster: DNA double-strand break repair protein
mre11; n=2; Methanosarcina|Rep: DNA double-strand break
repair protein mre11 - Methanosarcina mazei
(Methanosarcina frisia)
Length = 617
Score = 41.5 bits (93), Expect = 0.016
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 102 DDTLRILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
D +RIL +D HLG+ + + VR +D F AFE V+ AV VD ++ GD
Sbjct: 2 DREIRILHTADTHLGYRQYHSEVRRQDFFKAFETVIKDAVDMQVDAVVHAGD 53
>UniRef50_Q46FJ9 Cluster: DNA repair protein; n=1; Methanosarcina
barkeri str. Fusaro|Rep: DNA repair protein -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 776
Score = 40.3 bits (90), Expect = 0.036
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +3
Query: 111 LRILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
+RIL +D HLG+ + + VR D F AFE V++ AV+ VD ++ GD
Sbjct: 5 IRILHTADTHLGYRQYHSEVRRNDFFAAFELVVNDAVEMQVDAVVHAGD 53
>UniRef50_Q8U1N9 Cluster: DNA double-strand break repair protein
mre11; n=4; Thermococcaceae|Rep: DNA double-strand break
repair protein mre11 - Pyrococcus furiosus
Length = 426
Score = 39.5 bits (88), Expect = 0.063
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +3
Query: 129 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
+DIHLG+ + + P R E+ AF+ L +AVQ +VD IL+ GD
Sbjct: 7 ADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGD 49
>UniRef50_A4ENU6 Cluster: Putative ATP-dependent dsDNA exonuclease;
n=2; Rhodobacteraceae|Rep: Putative ATP-dependent dsDNA
exonuclease - Roseobacter sp. SK209-2-6
Length = 380
Score = 39.1 bits (87), Expect = 0.084
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +3
Query: 111 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
+RIL +D+HLG N ED E++LS V DVD++++ GD
Sbjct: 1 MRILHTADLHLGRQFNGISLEEDHAAILEQILSAVVAHDVDVLIIAGD 48
>UniRef50_Q3ISN6 Cluster: Conserved DNA repair operon protein; n=1;
Natronomonas pharaonis DSM 2160|Rep: Conserved DNA
repair operon protein - Natronomonas pharaonis (strain
DSM 2160 / ATCC 35678)
Length = 451
Score = 38.7 bits (86), Expect = 0.11
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 114 RILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
R+L D H+G+ + + P R ED AF +V AV+ DVD ++ GD
Sbjct: 3 RVLHTGDTHIGYRQYHTPERREDFLSAFRQVADDAVEMDVDAVVHAGD 50
>UniRef50_Q8DMQ1 Cluster: Tll0060 protein; n=1; Synechococcus
elongatus|Rep: Tll0060 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 428
Score = 38.3 bits (85), Expect = 0.15
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Frame = +3
Query: 111 LRILIASDIHLGF---MENDPVRGEDSFIAFEEVL-SLAVQCDVDLILLGGD 254
+R L +D+HLG+ +++P R D F AF+ L + A+Q VD +L+ GD
Sbjct: 2 VRFLHVADVHLGYNKYRQDNPSRMLDFFRAFDSALETYAIQAQVDFVLIAGD 53
>UniRef50_A3HX94 Cluster: DNA repair exonuclease; n=1; Algoriphagus
sp. PR1|Rep: DNA repair exonuclease - Algoriphagus sp.
PR1
Length = 414
Score = 37.9 bits (84), Expect = 0.19
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 111 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDCLIKLN 272
++IL +D HLG + R E+ + EE++ +A Q +VDL+LL GD N
Sbjct: 2 IKILHTADWHLGKRLQEFSRIEEQKLVLEEIIEVADQENVDLVLLAGDIFDTFN 55
>UniRef50_Q9X1X0 Cluster: Exonuclease, putative; n=3;
Thermotoga|Rep: Exonuclease, putative - Thermotoga
maritima
Length = 385
Score = 37.5 bits (83), Expect = 0.26
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = +3
Query: 111 LRILIASDIHLG---FMENDPV-RGEDSFIAFEEVLSLAVQCDVDLILLGGDCLIKLNLL 278
L+IL SD HLG + + PV R E+ A ++V+ A + +VDLILL GD L N
Sbjct: 7 LKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNP 66
Query: 279 SIVCLN 296
S+V L+
Sbjct: 67 SVVALH 72
>UniRef50_A5YS39 Cluster: DNA double-strand break repair protein
mre11; n=1; uncultured haloarchaeon|Rep: DNA
double-strand break repair protein mre11 - uncultured
haloarchaeon
Length = 397
Score = 37.1 bits (82), Expect = 0.34
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +3
Query: 108 TLRILIASDIHLGFMEND-PVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
T IL SD HLG + + VR +D AF++ +S+A+Q DVD ++ GD
Sbjct: 11 TTTILHISDTHLGNRQYEYDVRRDDFSDAFDQSVSIAIQEDVDAVIHTGD 60
>UniRef50_O29231 Cluster: DNA double-strand break repair protein
mre11; n=1; Archaeoglobus fulgidus|Rep: DNA
double-strand break repair protein mre11 - Archaeoglobus
fulgidus
Length = 443
Score = 37.1 bits (82), Expect = 0.34
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 129 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
+D+HLG+ + N P R ED AF+ + AV+ + D +++ GD
Sbjct: 7 ADVHLGYEQYNQPWRAEDFAKAFKVIAEKAVESNADFVVIAGD 49
>UniRef50_A0RW71 Cluster: DNA repair exonuclease; n=1; Cenarchaeum
symbiosum|Rep: DNA repair exonuclease - Cenarchaeum
symbiosum
Length = 417
Score = 36.7 bits (81), Expect = 0.45
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3
Query: 111 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
+R ASDIHLGF + ++G + + FE+V+ + VD +L+ GD
Sbjct: 1 MRFAHASDIHLGFQDGAALQGIEREV-FEKVIDGCISRKVDFVLMPGD 47
>UniRef50_A5GLK1 Cluster: Predicted phosphohydrolase; n=5;
Synechococcus|Rep: Predicted phosphohydrolase -
Synechococcus sp. (strain WH7803)
Length = 265
Score = 35.9 bits (79), Expect = 0.78
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +3
Query: 114 RILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDC 257
R++ SD HL VRG + F++ L+ A+Q DL+L+ GDC
Sbjct: 3 RLIQLSDPHLVARAEGRVRGRSALSLFQKALAQALQEQPDLLLVTGDC 50
>UniRef50_A2BM15 Cluster: Predicted DNA repair exonuclease; n=1;
Hyperthermus butylicus DSM 5456|Rep: Predicted DNA
repair exonuclease - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 407
Score = 35.9 bits (79), Expect = 0.78
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 111 LRILIASDIHLGFMENDPVRGE-DSFIAFEEVLSLAVQCDVDLILLGGD 254
L +L SD HLG+ + + E D + FEEV+ +A++ VD ++ GD
Sbjct: 11 LHLLHVSDTHLGYRQYGIIEREMDFYQVFEEVIDIAIREHVDAVIHTGD 59
>UniRef50_Q22P75 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 430
Score = 34.7 bits (76), Expect = 1.8
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 293 KCTEIIR-KYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQG 469
KC ++ + L + + +E L + K+ + N E NL+ISY S+H H +G
Sbjct: 76 KCQNLVDLELILRNTEIKLENLKNIYKDLEKLTNIEKLNLDISYNTFSLHAEHKYMMGID 135
Query: 470 SVSSLDILSITGLLIILVNGPTTRT*EY 553
++L S++ + ++ T+ Y
Sbjct: 136 KCTNLVSFSLSLSSVFILKYINTQNQNY 163
>UniRef50_Q3A5P7 Cluster: DNA repair exonuclease; n=1; Pelobacter
carbinolicus DSM 2380|Rep: DNA repair exonuclease -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 370
Score = 34.3 bits (75), Expect = 2.4
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = +3
Query: 111 LRILIASDIHLGFM-----ENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
+RIL +DIHLG + E R D AFE ++ LA+ V L+++ GD
Sbjct: 2 IRILHTADIHLGAVFAELAECAAARRNDQLYAFERMVELAIDRKVHLLVVAGD 54
>UniRef50_Q9UZC9 Cluster: DNA double-strand break repair protein
mre11; n=1; Pyrococcus abyssi|Rep: DNA double-strand
break repair protein mre11 - Pyrococcus abyssi
Length = 423
Score = 34.3 bits (75), Expect = 2.4
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 129 SDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
+D+HLG+ + N R E+ AFE+ + + V VD I++ GD
Sbjct: 17 ADVHLGYEQFNRSQRAEEFAKAFEDAIKICVDEKVDFIVIAGD 59
>UniRef50_Q74CF0 Cluster: Nuclease SbcCD, D subunit, putative; n=6;
Bacteria|Rep: Nuclease SbcCD, D subunit, putative -
Geobacter sulfurreducens
Length = 418
Score = 33.9 bits (74), Expect = 3.1
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 368 KNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLLIIL 520
+ F+RT+ P N P +++ GNHD + S+S ++ LS G + +L
Sbjct: 65 RTFARTIETLQPLKNAGIPCIAVEGNHDWIHRRDSISWMEALSQMGYIHLL 115
>UniRef50_Q4XVJ3 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 283
Score = 33.9 bits (74), Expect = 3.1
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 305 IIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPV-GQGSVSS 481
II KY +K S E LS+++ NF ++ +NIS I + N + P+ G+V+S
Sbjct: 158 IIDKYIDKNKAYSQEELSNELNNFFNNFYLQNFQINISQDIFKANDNENQPIHDDGTVTS 217
>UniRef50_O67727 Cluster: ATP-dependent dsDNA exonuclease; n=1;
Aquifex aeolicus|Rep: ATP-dependent dsDNA exonuclease -
Aquifex aeolicus
Length = 379
Score = 33.5 bits (73), Expect = 4.2
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 111 LRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDCLIKLN 272
+R++ SDIH G R ED A +V+ + DL+L+ GD K N
Sbjct: 1 MRLIHLSDIHAGKNLGRVSRNEDVVYALNQVVDFCKENKPDLVLVAGDVFDKAN 54
>UniRef50_O26641 Cluster: DNA double-strand break repair protein
mre11; n=1; Methanothermobacter thermautotrophicus str.
Delta H|Rep: DNA double-strand break repair protein
mre11 - Methanobacterium thermoautotrophicum
Length = 587
Score = 33.1 bits (72), Expect = 5.5
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 129 SDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
SD HLG ++ +R E F AF L A+Q DVD +++ GD
Sbjct: 177 SDCHLGAQKHPDLR-ELEFEAFRMALDDALQKDVDFMIIAGD 217
>UniRef50_Q9HRW4 Cluster: DNA double-strand break repair protein
mre11; n=5; Halobacteriaceae|Rep: DNA double-strand
break repair protein mre11 - Halobacterium salinarium
(Halobacterium halobium)
Length = 387
Score = 33.1 bits (72), Expect = 5.5
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 114 RILIASDIHLGFME-NDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
R++ D HLG+ + + P R +D AF+ V++ A+ VD ++ GD
Sbjct: 3 RVIHTGDTHLGYQQYHAPQRRQDFLDAFDAVITDAIDEGVDAVVHAGD 50
>UniRef50_A7EZJ7 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 812
Score = 32.7 bits (71), Expect = 7.3
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -1
Query: 384 VLEKFFIWSDSN-SILTGLSPRQYLRIISVHLNIQLTEGLA*SNNHLLKVSN 232
V K FIW DSN S+ TG +P+ +L + + LT+ + +N L ++N
Sbjct: 526 VTGKIFIWLDSNDSVTTGTAPKIFLPAPIITTSHVLTQNASGANETLTYITN 577
>UniRef50_Q2S4Q6 Cluster: Nuclease SbcCD, D subunit subfamily,
putative; n=1; Salinibacter ruber DSM 13855|Rep:
Nuclease SbcCD, D subunit subfamily, putative -
Salinibacter ruber (strain DSM 13855)
Length = 453
Score = 32.3 bits (70), Expect = 9.6
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 401 PNLNISYPILSIHGNHDDPVGQGSVSSLDI 490
P + P++ I GNHD PV G SSLDI
Sbjct: 99 PLADADIPVVLIVGNHDHPVTFGRASSLDI 128
>UniRef50_Q21FY1 Cluster: Aminoglycoside phosphotransferase; n=1;
Saccharophagus degradans 2-40|Rep: Aminoglycoside
phosphotransferase - Saccharophagus degradans (strain
2-40 / ATCC 43961 / DSM 17024)
Length = 355
Score = 32.3 bits (70), Expect = 9.6
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -3
Query: 358 RQQLYTNRFIPKTIFADYFCTFKHTIDRRFSLIKQSPPKSIKSTSHC 218
R+ L N FIPKT+ A Y + ID+ S+I +SI+ C
Sbjct: 182 REYLLANDFIPKTLLAAYQTVSEQLIDKMQSVITNINYRSIRLHGDC 228
>UniRef50_A3M5K7 Cluster: Putative hydrolase; n=1; Acinetobacter
baumannii ATCC 17978|Rep: Putative hydrolase -
Acinetobacter baumannii (strain ATCC 17978 / NCDC KC
755)
Length = 403
Score = 32.3 bits (70), Expect = 9.6
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 356 SDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDI-LSITGL 508
S+ I+NF + DP NI P LS+ P+G+G+ S L + L I GL
Sbjct: 335 SNSIENFQTLIRNTDPGSNIGLPGLSL------PIGKGAKSKLPVGLEIDGL 380
>UniRef50_Q2QUC2 Cluster: Retrotransposon protein, putative,
unclassified; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 1913
Score = 32.3 bits (70), Expect = 9.6
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 144 GFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGDCLIKLNLLSIV 287
GF+E E +A +E ++LA+Q + I+L DCLI +N++ V
Sbjct: 1837 GFLERCSSPLESELLACKEGINLALQWTLLPIILESDCLIAVNMIQSV 1884
>UniRef50_Q4Y8G5 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 657
Score = 32.3 bits (70), Expect = 9.6
Identities = 15/53 (28%), Positives = 31/53 (58%)
Frame = +2
Query: 296 CTEIIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDD 454
C I++ +G + I+ L+D I N+ T+N+++ ++ +Y S+ G HD+
Sbjct: 24 CNLIVKTDDVGKLKLWIQYLAD-IFNYFNTLNFDENKMDHNYTHQSVEGKHDE 75
>UniRef50_A2ELA1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 3111
Score = 32.3 bits (70), Expect = 9.6
Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 314 KYCLGDK-PVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPV 460
K +G+K P+++ + ++Q+ NF+ T ++ ++P L ++G D PV
Sbjct: 187 KLKVGEKIPITLTMAANQVGNFNETFTFKIKGALKTHPTLLVYGRVDGPV 236
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,859,053
Number of Sequences: 1657284
Number of extensions: 11691915
Number of successful extensions: 28838
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 27841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28779
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -