Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0602
(621 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 25 0.51
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 23 1.6
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 23 1.6
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 23 1.6
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 23 2.1
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 22 4.8
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.3
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.3
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.3
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.3
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.3
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 25.0 bits (52), Expect = 0.51
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 308 IRKYCLGDKPVSIELLSDQIKNFSRTVNYED 400
IRKY LG+K +S + D + FS + D
Sbjct: 370 IRKYYLGEKKLSKKTFRDLVAMFSDRIFIND 400
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 308 IRKYCLGDKPVSIELLSDQIKNFSRTVNYED 400
IRKY LG+K +S + + + FS + D
Sbjct: 370 IRKYYLGEKKLSKKTFRELVAMFSDRIFIND 400
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 308 IRKYCLGDKPVSIELLSDQIKNFSRTVNYED 400
IRKY LG+K +S + + + FS + D
Sbjct: 370 IRKYYLGEKKLSKKTFRELVAMFSDRIFIND 400
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 308 IRKYCLGDKPVSIELLSDQIKNFSRTVNYED 400
IRKY LG+K +S + + + FS + D
Sbjct: 370 IRKYYLGEKKLSKKTFRELVTMFSDRIFIND 400
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 308 IRKYCLGDKPVSIELLSDQIKNFSRTVNYED 400
IRKY LG+K +S + + FS + D
Sbjct: 370 IRKYYLGEKKLSKRTFRELVAMFSDRIFIND 400
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 21.8 bits (44), Expect = 4.8
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +3
Query: 222 CDVDLILLGGDCLIKLNLLSIVC 290
C V+ GG C+ K+N +C
Sbjct: 72 CKVNPCENGGTCVDKINAFQCIC 94
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -1
Query: 93 TLKCRSQSLFYLYNSIM 43
T+K R ++L+Y +N I+
Sbjct: 204 TIKIRRRTLYYFFNLIV 220
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -1
Query: 93 TLKCRSQSLFYLYNSIM 43
T+K R ++L+Y +N I+
Sbjct: 204 TIKIRRRTLYYFFNLIV 220
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -1
Query: 93 TLKCRSQSLFYLYNSIM 43
T+K R ++L+Y +N I+
Sbjct: 204 TIKIRRRTLYYFFNLIV 220
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -1
Query: 93 TLKCRSQSLFYLYNSIM 43
T+K R ++L+Y +N I+
Sbjct: 204 TIKIRRRTLYYFFNLIV 220
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.3
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -1
Query: 93 TLKCRSQSLFYLYNSIM 43
T+K R ++L+Y +N I+
Sbjct: 204 TIKIRRRTLYYFFNLIV 220
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,591
Number of Sequences: 336
Number of extensions: 3081
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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