Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0602
(621 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF132144-1|AAD33591.1| 620|Drosophila melanogaster endo/exonucl... 113 2e-25
AE014134-2061|AAF53093.1| 620|Drosophila melanogaster CG16928-P... 113 2e-25
AY060919-1|AAL28467.1| 177|Drosophila melanogaster GM06264p pro... 31 1.3
AY060471-1|AAL25510.1| 323|Drosophila melanogaster SD05789p pro... 31 1.3
AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2 pr... 31 1.3
AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon prot... 31 1.3
AE014296-638|AAN11559.1| 323|Drosophila melanogaster CG12016-PB... 31 1.3
AE014296-637|AAF47759.2| 323|Drosophila melanogaster CG12016-PA... 31 1.3
AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB... 31 1.3
AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA... 31 1.3
AE014134-2032|AAF53071.3| 461|Drosophila melanogaster CG14916-P... 30 2.2
AE013599-139|AAF57287.1| 683|Drosophila melanogaster CG7856-PA ... 29 5.1
BT030178-1|ABN49317.1| 217|Drosophila melanogaster IP17826p pro... 29 6.7
BT030163-1|ABN49302.1| 217|Drosophila melanogaster IP17726p pro... 29 6.7
>AF132144-1|AAD33591.1| 620|Drosophila melanogaster
endo/exonuclease Mre11 protein.
Length = 620
Score = 113 bits (271), Expect = 2e-25
Identities = 52/90 (57%), Positives = 69/90 (76%), Gaps = 4/90 (4%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNF----SRTVNYEDPNLNISY 421
LF A PS N + KC E++R+Y GD+PVS+E+LSDQ + F +++VNYEDPNLNI+
Sbjct: 63 LFHDAVPSQNALHKCIELLRRYTFGDRPVSLEILSDQGQCFHNAVNQSVNYEDPNLNIAI 122
Query: 422 PILSIHGNHDDPVGQGSVSSLDILSITGLL 511
P+ SIHGNHDDP G G +SSLD+LS +GL+
Sbjct: 123 PVFSIHGNHDDPSGFGRLSSLDLLSTSGLV 152
Score = 76.2 bits (179), Expect = 3e-14
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = +3
Query: 102 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
D+ +RIL+A+D HLG+ E D VRGEDSF AFEE+L LAV DVD+ILLGGD
Sbjct: 12 DNVIRILVATDNHLGYGEKDAVRGEDSFTAFEEILELAVSEDVDMILLGGD 62
Score = 48.4 bits (110), Expect = 8e-06
Identities = 20/38 (52%), Positives = 29/38 (76%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKD 618
++NYFG+WTD T V ISPVL++KG ++LA L+ + D
Sbjct: 151 LVNYFGRWTDLTQVEISPVLMRKGESQLALYGLSHIHD 188
>AE014134-2061|AAF53093.1| 620|Drosophila melanogaster CG16928-PA
protein.
Length = 620
Score = 113 bits (271), Expect = 2e-25
Identities = 52/90 (57%), Positives = 69/90 (76%), Gaps = 4/90 (4%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNF----SRTVNYEDPNLNISY 421
LF A PS N + KC E++R+Y GD+PVS+E+LSDQ + F +++VNYEDPNLNI+
Sbjct: 63 LFHDAVPSQNALHKCIELLRRYTFGDRPVSLEILSDQGQCFHNAVNQSVNYEDPNLNIAI 122
Query: 422 PILSIHGNHDDPVGQGSVSSLDILSITGLL 511
P+ SIHGNHDDP G G +SSLD+LS +GL+
Sbjct: 123 PVFSIHGNHDDPSGFGRLSSLDLLSTSGLV 152
Score = 76.2 bits (179), Expect = 3e-14
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = +3
Query: 102 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
D+ +RIL+A+D HLG+ E D VRGEDSF AFEE+L LAV DVD+ILLGGD
Sbjct: 12 DNVIRILVATDNHLGYGEKDAVRGEDSFTAFEEILELAVSEDVDMILLGGD 62
Score = 48.4 bits (110), Expect = 8e-06
Identities = 20/38 (52%), Positives = 29/38 (76%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKD 618
++NYFG+WTD T V ISPVL++KG ++LA L+ + D
Sbjct: 151 LVNYFGRWTDLTQVEISPVLMRKGESQLALYGLSHIHD 188
>AY060919-1|AAL28467.1| 177|Drosophila melanogaster GM06264p
protein.
Length = 177
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 301 CTFKHTIDRRFSLIKQSPPKSIKSTSHCTARDKTSS-KAIKLS 176
C + T R+F + K +PP S K+ S C A T++ K++ +S
Sbjct: 110 CPHQTTPKRKFDISKYAPPNSGKAASSCAAEAATAAVKSLAIS 152
>AY060471-1|AAL25510.1| 323|Drosophila melanogaster SD05789p
protein.
Length = 323
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 497 ITGLLIILVNGPTTRT*EYHQYFCKKVLRGSPLWT*PF 610
+ G+ + G TT H YF K LRG+PLW P+
Sbjct: 6 VIGISGVTCGGKTTLAHSLHDYF--KGLRGAPLWNSPY 41
>AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2
protein.
Length = 1711
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 301 CTFKHTIDRRFSLIKQSPPKSIKSTSHCTARDKTSS-KAIKLS 176
C + T R+F + K +PP S K+ S C A T++ K++ +S
Sbjct: 1628 CPHQTTPKRKFDISKYAPPNSGKAASSCAAEAATAAVKSLAIS 1670
>AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon protein.
Length = 1695
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 301 CTFKHTIDRRFSLIKQSPPKSIKSTSHCTARDKTSS-KAIKLS 176
C + T R+F + K +PP S K+ S C A T++ K++ +S
Sbjct: 1628 CPHQTTPKRKFDISKYAPPNSGKAASSCAAEAATAAVKSLAIS 1670
>AE014296-638|AAN11559.1| 323|Drosophila melanogaster CG12016-PB,
isoform B protein.
Length = 323
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 497 ITGLLIILVNGPTTRT*EYHQYFCKKVLRGSPLWT*PF 610
+ G+ + G TT H YF K LRG+PLW P+
Sbjct: 6 VIGISGVTCGGKTTLAHSLHDYF--KGLRGAPLWNSPY 41
>AE014296-637|AAF47759.2| 323|Drosophila melanogaster CG12016-PA,
isoform A protein.
Length = 323
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 497 ITGLLIILVNGPTTRT*EYHQYFCKKVLRGSPLWT*PF 610
+ G+ + G TT H YF K LRG+PLW P+
Sbjct: 6 VIGISGVTCGGKTTLAHSLHDYF--KGLRGAPLWNSPY 41
>AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB,
isoform B protein.
Length = 1695
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 301 CTFKHTIDRRFSLIKQSPPKSIKSTSHCTARDKTSS-KAIKLS 176
C + T R+F + K +PP S K+ S C A T++ K++ +S
Sbjct: 1628 CPHQTTPKRKFDISKYAPPNSGKAASSCAAEAATAAVKSLAIS 1670
>AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA,
isoform A protein.
Length = 1711
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 301 CTFKHTIDRRFSLIKQSPPKSIKSTSHCTARDKTSS-KAIKLS 176
C + T R+F + K +PP S K+ S C A T++ K++ +S
Sbjct: 1628 CPHQTTPKRKFDISKYAPPNSGKAASSCAAEAATAAVKSLAIS 1670
>AE014134-2032|AAF53071.3| 461|Drosophila melanogaster CG14916-PA
protein.
Length = 461
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Frame = +2
Query: 443 NHDDPVGQGSVSSLDILSITGLLIILVN------GPTTRT*EYHQYFCKKVL 580
NHD PV + + L +L +GL+ I GP T+T E++ +F + V+
Sbjct: 48 NHDHPVFEDIRTILSVLKASGLMPIYEQVSDYEVGPPTKTNEFYSFFVRGVV 99
>AE013599-139|AAF57287.1| 683|Drosophila melanogaster CG7856-PA
protein.
Length = 683
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -3
Query: 244 KSIKSTSHCTARDKTSSKAIKLSSPRTGSFSMKPR*ISEAINILSVSSGDHAEMSFSII 68
K+ KS TAR S K+ + SSPR+ S + + + S + D+ E +F+++
Sbjct: 387 KAPKSRKETTARSNLSRKSYRRSSPRSRSRGSRANALESPLQ-KSEDTPDNVEYAFALV 444
>BT030178-1|ABN49317.1| 217|Drosophila melanogaster IP17826p
protein.
Length = 217
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 62 TCTTRL*CYLKQLKYNYADW 3
TC TRL +KQL+ NYA W
Sbjct: 43 TCKTRLETIVKQLQDNYAKW 62
>BT030163-1|ABN49302.1| 217|Drosophila melanogaster IP17726p
protein.
Length = 217
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 62 TCTTRL*CYLKQLKYNYADW 3
TC TRL +KQL+ NYA W
Sbjct: 43 TCKTRLETIVKQLQDNYAKW 62
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,420,312
Number of Sequences: 53049
Number of extensions: 532917
Number of successful extensions: 1353
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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