Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0602
(621 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ... 28 4.7
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical... 28 4.7
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 28 6.2
AL132952-1|CAB61134.2| 214|Caenorhabditis elegans Hypothetical ... 28 6.2
U39999-13|AAA81111.1| 320|Caenorhabditis elegans Hypothetical p... 27 8.2
>Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical
protein ZC302.1 protein.
Length = 728
Score = 82.6 bits (195), Expect = 2e-16
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Frame = +2
Query: 254 LFDQAKPSVNCMFKCTEIIRKYCLGDKPVSIELLSDQIKNFSRTV----NYEDPNLNISY 421
LF + PS + T+++R+YCL P+++E LSD NF+++V NY D NLN+
Sbjct: 114 LFHENNPSREVQHRVTQLLRQYCLNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGL 173
Query: 422 PILSIHGNHDDPVGQGSVSSLDILSITGLL 511
PI +IHGNHDD G+G +++LD+L +GL+
Sbjct: 174 PIFTIHGNHDDLSGKG-LTALDLLHESGLV 202
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +3
Query: 102 DDTLRILIASDIHLGFMENDPVRGEDSFIAFEEVLSLAVQCDVDLILLGGD 254
+D ++IL+A+DIH G+ EN D+ FEEVL +A + VD+ILLGGD
Sbjct: 63 EDIIKILVATDIHCGYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGD 113
Score = 33.9 bits (74), Expect = 0.094
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 505 VINYFGKWTDYTHVRISPVLLQKGLTRLASMDLAILKD 618
++N FGK ++ +SP+LL+KG TRLA + +D
Sbjct: 201 LVNLFGKHSNIQEFIVSPILLRKGETRLALYGIGSQRD 238
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical
protein K12D12.1 protein.
Length = 1520
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3
Query: 118 ILSVSSGDHAEMSFSIIILLVQLDYDVISNNLNTIMPIG 2
+ +S+ H E S I+ + DY V SNN+N ++PIG
Sbjct: 786 VAEISAYHHGEQSLMGTIVNLAQDY-VGSNNINLLLPIG 823
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical
protein K12D12.1 protein.
Length = 1520
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3
Query: 118 ILSVSSGDHAEMSFSIIILLVQLDYDVISNNLNTIMPIG 2
+ +S+ H E S I+ + DY V SNN+N ++PIG
Sbjct: 786 VAEISAYHHGEQSLMGTIVNLAQDY-VGSNNINLLLPIG 823
>Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical
protein C28A5.2 protein.
Length = 1218
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2
Query: 344 IELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLLIILV 523
+ L+ ++ RT NY +LN+SY + +P GQ S + +I+ I + +
Sbjct: 515 VRQLASTVREHPRTTNYPSRSLNLSYEVSGALA-RTNPNGQLSAADNNIVLINDSISLDH 573
Query: 524 NGPTT 538
N P T
Sbjct: 574 NLPDT 578
>Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical
protein C28A5.1 protein.
Length = 1223
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2
Query: 344 IELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSLDILSITGLLIILV 523
+ L+ ++ RT NY +LN+SY + +P GQ S + +I+ I + +
Sbjct: 515 VRQLASTVREHPRTTNYPSRSLNLSYEVSGALA-RTNPNGQLSAADNNIVLINDSISLDH 573
Query: 524 NGPTT 538
N P T
Sbjct: 574 NLPDT 578
>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = -3
Query: 361 VRQQLYTNRFIPKTIFADYFCTFKHTIDRRFSLIKQSPPKSIKSTSHCTAR-----DKTS 197
+++ L ++ P++ F+ HTI + S I +SP S ++ + T R D+T
Sbjct: 576 LQESLNLSKITPESQFSTQNLAILHTIPMKISEISKSPAASTQNDTD-TPRIWLQLDRTQ 634
Query: 196 SKAIKLSSPRT 164
KAIK+ T
Sbjct: 635 PKAIKVEEEPT 645
>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = -3
Query: 361 VRQQLYTNRFIPKTIFADYFCTFKHTIDRRFSLIKQSPPKSIKSTSHCTAR-----DKTS 197
+++ L ++ P++ F+ HTI + S I +SP S ++ + T R D+T
Sbjct: 576 LQESLNLSKITPESQFSTQNLAILHTIPMKISEISKSPAASTQNDTD-TPRIWLQLDRTQ 634
Query: 196 SKAIKLSSPRT 164
KAIK+ T
Sbjct: 635 PKAIKVEEEPT 645
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
protein H02I12.1 protein.
Length = 1319
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +2
Query: 305 IIRKYCLGDKPVSIELLSDQIKNFSRTVNYEDPNLNISYPILSIHGNHDDPVGQGSVSSL 484
+ ++YC P ++ ++ Q +F T +DP +SY +I +D S +S
Sbjct: 217 VFQRYC---PPGTVFNINQQSCDFQCTT--DDPTTTVSYSTSTITTPQEDDSEYSSTTSA 271
Query: 485 DILSIT 502
D++S T
Sbjct: 272 DVISTT 277
>AL132952-1|CAB61134.2| 214|Caenorhabditis elegans Hypothetical
protein Y51H4A.1 protein.
Length = 214
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -3
Query: 259 KQSPPKSIKSTSHCTARDKTSSKAIKLS--SPRTGSFSM 149
+++P S KSTS C + + S ++I+ S SPR SF +
Sbjct: 100 EKTPAGSPKSTSSCISSEILSEQSIEFSSISPRPSSFPL 138
>U39999-13|AAA81111.1| 320|Caenorhabditis elegans Hypothetical
protein F41G3.2 protein.
Length = 320
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 205 KTSSKAIKLSSPRTGSFSMKPR*ISEAINILSVSSGDHAEMS 80
++ S+ ++SP S+ M P+ S + N+ S S DH + S
Sbjct: 83 RSRSELALVTSPLPSSYQMSPKKTSPSSNMRSAQSYDHLDNS 124
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,881,733
Number of Sequences: 27780
Number of extensions: 283539
Number of successful extensions: 695
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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