Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0601
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   1.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   3.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.7  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.7  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +3

Query: 249 EDRQNIILCSYSVLCPYKYNVCPWA*PALKRIEGCAKMFIYIF 377
           + + N+I C   ++   K  +C W   A K+  GC+   ++ F
Sbjct: 130 DGKYNMITCPNGLVYNDKAGICSWPDEAKKK--GCSSEEVFQF 170


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +3

Query: 459 IIGKGPFSLVRRC-VHRQQHNSLQ*KLWMWPASLLVPGLSTADLKREATICHMLK-HPHI 632
           +IG+G F +VRR  +  ++ N  Q  + M   S            +E  I   ++ HP+I
Sbjct: 456 VIGEGAFGIVRRAFLDLKEDNKTQVAVKMLKES--PTSEEIRQFTQEINIMKSVRQHPYI 513

Query: 633 VELL 644
           V L+
Sbjct: 514 VSLI 517


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 441 VYELCEIIGKGPFSLVR 491
           ++ +C   G  P+SLVR
Sbjct: 23  LFYVCTFFGLAPYSLVR 39


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 210  RIKLYTFYLVK 178
            R K+Y FYLVK
Sbjct: 1024 RAKIYFFYLVK 1034


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 441 VYELCEIIGKGPFSLVR 491
           ++ +C   G  P+SLVR
Sbjct: 23  LFYVCTFFGLAPYSLVR 39


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 210 RIKLYTFYLVK 178
           R K+Y FYLVK
Sbjct: 305 RAKIYFFYLVK 315


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,472
Number of Sequences: 336
Number of extensions: 3001
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)