BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0601 (649 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase Srk1|Schizo... 31 0.11 SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase Ssp2|Schiz... 31 0.19 SPCC63.08c |ppk36|atg1|serine/threonine protein kinase Ppk36|Sch... 27 1.8 SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 27 1.8 SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8 |Schizos... 26 4.1 SPAC5H10.02c |||ThiJ domain protein|Schizosaccharomyces pombe|ch... 26 4.1 SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 26 4.1 SPAC6B12.10c |spp1|pri1|DNA primase catalytic subunit Spp1 |Schi... 26 5.4 SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 26 5.4 SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 7.1 SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 25 7.1 >SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase Srk1|Schizosaccharomyces pombe|chr 3|||Manual Length = 580 Score = 31.5 bits (68), Expect = 0.11 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 7/75 (9%) Frame = +3 Query: 444 YELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVP-------GLSTADLKREAT 602 Y L + +G G FS V + +H + + K+ P G+ + ++ +E Sbjct: 124 YTLLQKMGDGAFSNVYKAIHNRTGEKVAIKVVQRAQPNTDPRDPRKRQGVESHNILKEVQ 183 Query: 603 ICHMLKHPHIVELLE 647 I +KHP+I++LLE Sbjct: 184 IMRRVKHPNIIQLLE 198 >SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase Ssp2|Schizosaccharomyces pombe|chr 3|||Manual Length = 576 Score = 30.7 bits (66), Expect = 0.19 Identities = 18/68 (26%), Positives = 32/68 (47%) Frame = +3 Query: 444 YELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLSTADLKREATICHMLKH 623 Y + E +G+G F V+ H + + K LL ++RE + +L+H Sbjct: 34 YIIRETLGEGSFGKVKLATHYKTQQKVALKFIS--RQLLKKSDMHMRVEREISYLKLLRH 91 Query: 624 PHIVELLE 647 PHI++L + Sbjct: 92 PHIIKLYD 99 >SPCC63.08c |ppk36|atg1|serine/threonine protein kinase Ppk36|Schizosaccharomyces pombe|chr 3|||Manual Length = 830 Score = 27.5 bits (58), Expect = 1.8 Identities = 18/68 (26%), Positives = 35/68 (51%) Frame = +3 Query: 444 YELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLSTADLKREATICHMLKH 623 Y + IG+G F++V + H + + + K + L L +L+ E +I ++H Sbjct: 14 YVIRSEIGRGSFAIVYKGKHTETNRVISIKSVL--TKKLTKKL-LENLESEISILKEIRH 70 Query: 624 PHIVELLE 647 H+VEL++ Sbjct: 71 VHVVELID 78 >SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosaccharomyces pombe|chr 1|||Manual Length = 636 Score = 27.5 bits (58), Expect = 1.8 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 5/77 (6%) Frame = +3 Query: 432 FDDVYELC-EIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLS----TADLKRE 596 F + Y C E+IG+G F +VR NS L+ P S T L E Sbjct: 346 FVEKYGRCQEVIGRGAFGVVRIAHKVDPQNSGSETLYAVKEFRRKPAESQKKYTKRLTSE 405 Query: 597 ATICHMLKHPHIVELLE 647 I L+HP+++ L+ Sbjct: 406 FCISSSLRHPNVIHTLD 422 >SPAC22G7.08 |ppk8||serine/threonine protein kinase Ppk8 |Schizosaccharomyces pombe|chr 1|||Manual Length = 513 Score = 26.2 bits (55), Expect = 4.1 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 7/74 (9%) Frame = +3 Query: 447 ELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLSTADLKR-------EATI 605 +L +IG+G S +R R KL ++ A + P L T+ L+R E T Sbjct: 242 KLNNVIGEGASSFIRVINDRN-------KLPIYVAKVFRPPLDTSLLRRYVRYFIAEYTF 294 Query: 606 CHMLKHPHIVELLE 647 L+HP+I+++L+ Sbjct: 295 ASTLRHPNIIKVLD 308 >SPAC5H10.02c |||ThiJ domain protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 240 Score = 26.2 bits (55), Expect = 4.1 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = -3 Query: 380 GKNINKHFSTAFDPFQGWLRPGTNVVFI 297 GKN HFS P+ + + G NV F+ Sbjct: 24 GKNTGVHFSELLIPYNVFKKAGFNVQFV 51 >SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1087 Score = 26.2 bits (55), Expect = 4.1 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +3 Query: 444 YELCEIIGKGPFSLVRRCV 500 YE+ + +GKG F V RC+ Sbjct: 699 YEVVDFLGKGSFGQVLRCI 717 >SPAC6B12.10c |spp1|pri1|DNA primase catalytic subunit Spp1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 454 Score = 25.8 bits (54), Expect = 5.4 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Frame = -2 Query: 321 PRDKRCIYKDTIHYRNTE*YFD----DLQKI*SNLVQNNICRIKLYTFYLVKVE 172 PRD++ I K T H E FD D + + + NIC K + F + V+ Sbjct: 110 PRDRKTIRKSTFHPLKKELVFDIDMTDYDDVRTCCSKTNICE-KCWPFITIAVQ 162 >SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual Length = 836 Score = 25.8 bits (54), Expect = 5.4 Identities = 8/23 (34%), Positives = 15/23 (65%) Frame = +3 Query: 444 YELCEIIGKGPFSLVRRCVHRQQ 512 YE+ + +GKG F V +C+ ++ Sbjct: 518 YEIIDTVGKGSFGQVLKCIDHKR 540 >SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 462 Score = 25.4 bits (53), Expect = 7.1 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -2 Query: 237 SNLVQNNICRIKLYTFYLVKVEARKVPNKN 148 S+ +++ R+KL T L K KVPNKN Sbjct: 201 SSTIKSPPSRVKLPTSILSKSPPLKVPNKN 230 >SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces pombe|chr 1|||Manual Length = 817 Score = 25.4 bits (53), Expect = 7.1 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +1 Query: 421 TKCYSTMCTNCAKSSERVHSVWFVAVCTGNSTTVCSENC 537 +K S TN + S R HSV+ + + NSTT E C Sbjct: 667 SKNRSVAATNANEHSSRSHSVFMLHLNGSNSTT--GETC 703 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,421,964 Number of Sequences: 5004 Number of extensions: 45463 Number of successful extensions: 120 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 120 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 291768710 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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