Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0601
(649 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6976| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_12255| Best HMM Match : Pkinase (HMM E-Value=0) 48 5e-06
SB_18299| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_42711| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0) 38 0.007
SB_17501| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_33752| Best HMM Match : I-set (HMM E-Value=3.7e-15) 35 0.066
SB_19269| Best HMM Match : Pkinase (HMM E-Value=2.4e-38) 35 0.066
SB_32519| Best HMM Match : Pkinase (HMM E-Value=7.3e-39) 33 0.20
SB_17500| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_58868| Best HMM Match : Pkinase (HMM E-Value=1.9e-32) 31 0.61
SB_26666| Best HMM Match : Pkinase (HMM E-Value=3.7e-38) 31 0.61
SB_47579| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_39694| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 4.3
SB_26967| Best HMM Match : Pkinase (HMM E-Value=0) 29 4.3
SB_23777| Best HMM Match : Pkinase (HMM E-Value=0.065) 29 4.3
SB_17071| Best HMM Match : Pkinase (HMM E-Value=0.065) 29 4.3
SB_4962| Best HMM Match : FAD_binding_4 (HMM E-Value=5.7e-31) 28 5.7
SB_3163| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_42288| Best HMM Match : Transglut_N (HMM E-Value=9.2e-34) 28 7.5
SB_33716| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_37321| Best HMM Match : Pkinase (HMM E-Value=2.4e-27) 27 9.9
SB_11460| Best HMM Match : Pkinase (HMM E-Value=0) 27 9.9
>SB_6976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 56.8 bits (131), Expect = 1e-08
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Frame = +3
Query: 432 FDDVYELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLSTADLK---REAT 602
F D YEL E +GKG FS+VRRC+H++ K+ + LS+ DL+ REA
Sbjct: 9 FHDTYELKEELGKGAFSIVRRCIHKESRIEYAAKI------INTRKLSSRDLQKLDREAR 62
Query: 603 ICHMLKHPHIV 635
IC +LKHP+IV
Sbjct: 63 ICRLLKHPNIV 73
>SB_12255| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 476
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = +3
Query: 396 ITCVKMAEDEVLFDDVYELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLS 575
++C + + F++ YEL E +GKG FS VR+C HR+ K+ + +
Sbjct: 1 MSCPVIITEGGTFNEKYELKEELGKGAFSTVRKCCHRETKIEYAVKIL---DTKNMTQRD 57
Query: 576 TADLKREATICHMLKHPHIVEL 641
++REA IC L+HP++V L
Sbjct: 58 VHKVEREARICRHLRHPNVVRL 79
>SB_18299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/68 (33%), Positives = 36/68 (52%)
Frame = +3
Query: 444 YELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLSTADLKREATICHMLKH 623
Y + ++IG G F++VR C HR+ + K+ V G ++ E +I +KH
Sbjct: 20 YRIGKVIGDGNFAVVRECKHRKTNKEYALKI---INKAKVKGKEHM-IENEISILRRVKH 75
Query: 624 PHIVELLE 647
HIVEL+E
Sbjct: 76 NHIVELIE 83
>SB_42711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 920
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +3
Query: 399 TCVKMAEDEVLFDDVYELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLST 578
T + M + + YE+ + IGKG FS+V+ HR + + K+ + ++
Sbjct: 142 TAMGMDRSKAIRVGFYEIDKTIGKGNFSVVKLARHRITKSQVAIKI---IDKTQLNEMNL 198
Query: 579 ADLKREATICHMLKHPHIVELLE 647
+ RE I +L+HPHIV+L +
Sbjct: 199 KKIYREVQIMKLLQHPHIVKLYQ 221
>SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0)
Length = 1663
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +3
Query: 435 DDVYELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLSTADLKREATICHM 614
D Y + +G+G +++V++CV + K M +L P D+ RE T+ M
Sbjct: 1090 DQYYNIYAELGRGRYAVVKKCVEKSTGKEFAAK--MVKKRMLDP----VDIDREVTVLRM 1143
Query: 615 LKHPHIVELLE 647
LKHP++ L+
Sbjct: 1144 LKHPNLCIFLD 1154
>SB_17501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 819
Score = 35.1 bits (77), Expect = 0.050
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = +3
Query: 456 EIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLSTADLKREATICHMLKHPHIV 635
EI+G G F +V VHRQ + K+ L P A LK E I L HP +V
Sbjct: 528 EILGSGQFGIVYGGVHRQSGREVAVKV---IDKLRFPTKQEAQLKNEVAILKQLNHPGMV 584
Query: 636 EL 641
L
Sbjct: 585 TL 586
>SB_33752| Best HMM Match : I-set (HMM E-Value=3.7e-15)
Length = 783
Score = 34.7 bits (76), Expect = 0.066
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +3
Query: 405 VKMAEDEVLFDDVYELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLSTAD 584
VK+ ++ + +D Y L E +G+G F +VR+CVH L+ + S+ +
Sbjct: 442 VKLRKEHI--EDFYALEEEVGRGRFGVVRKCVH------LKTAVHFVAKSIKARPSQKEE 493
Query: 585 LKREATICHMLKHPHI 632
RE + + L+HP++
Sbjct: 494 FSREIDVMNELRHPNL 509
>SB_19269| Best HMM Match : Pkinase (HMM E-Value=2.4e-38)
Length = 501
Score = 34.7 bits (76), Expect = 0.066
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 417 EDEVLFDDVYELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLSTAD--LK 590
EDE +DVYE +++G+G F +V H + W A S+A L+
Sbjct: 18 EDEKQIEDVYEFGQVLGRGSFGVVNEAKHIETGTR-----WAIKAVNKEKAGSSAVKLLE 72
Query: 591 REATICHMLKHPHIVELLE 647
RE I + H H++ L E
Sbjct: 73 REVMIMKKIYHEHLIHLEE 91
>SB_32519| Best HMM Match : Pkinase (HMM E-Value=7.3e-39)
Length = 1486
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 582 DLKREATICHMLKHPHIVELLE 647
+++REA I M++HPHI+ LLE
Sbjct: 226 NMRREARILQMVRHPHIISLLE 247
>SB_17500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 393 VITCVKMAEDEVLFDDVYELCEIIGKGPFSLVRRCVHRQ 509
V+ +A D+ Y++ E+IG+G F+ V RC+ R+
Sbjct: 14 VMPAFLLAHDDENMSPNYDMLELIGEGSFAKVFRCIERK 52
>SB_58868| Best HMM Match : Pkinase (HMM E-Value=1.9e-32)
Length = 434
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 438 DVYELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWP 548
D YE+ E IGKG +S RRCV++ K++ P
Sbjct: 236 DEYEIKEEIGKGAYSSCRRCVNKADGKEYAVKIFEKP 272
>SB_26666| Best HMM Match : Pkinase (HMM E-Value=3.7e-38)
Length = 1215
Score = 31.5 bits (68), Expect = 0.61
Identities = 21/68 (30%), Positives = 36/68 (52%)
Frame = +3
Query: 444 YELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLSTADLKREATICHMLKH 623
Y + + IGKG F++V+ H + + K+ + + L L+ +KRE + L H
Sbjct: 20 YNIEKTIGKGNFAVVKLATHCITKSKVAVKI-IDKSQLDDDNLTK--VKREVKVMKKLAH 76
Query: 624 PHIVELLE 647
PHI++L E
Sbjct: 77 PHIIKLHE 84
>SB_47579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 444 YELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLSTADLKREATICHMLKH 623
YE E IG G + + ++ + R++ N + +WM + L E + LKH
Sbjct: 9 YEELERIGSGSYGICKK-IRRKKDNKVL--VWMELDYGQMSETEKQMLVSEVNLLRELKH 65
Query: 624 PHIV 635
PHIV
Sbjct: 66 PHIV 69
>SB_39694| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 893
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 423 EVLFDDVYELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLSTAD-LKREA 599
E+ F ++ EL ++IG G F V R + R + +++ + T D +K+EA
Sbjct: 92 EIPFRNI-ELIDVIGVGAFGKVYRGIWRDEEVAVK----VARTDNYEDFTQTLDSVKKEA 146
Query: 600 TICHMLKHPHIVELL 644
I ML+H +IV LL
Sbjct: 147 RIFSMLRHQNIVGLL 161
>SB_26967| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 428
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 444 YELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPA--SLLVPGLSTADLKREATICHML 617
Y L E +G G F V+ VH+ + + K+ SL V G ++RE +
Sbjct: 20 YNLGETLGVGTFGKVKLAVHQLTGHKVAIKILNRNKIKSLDVVG----KIRREIQNLKLF 75
Query: 618 KHPHIVELLE 647
+HPHI++L +
Sbjct: 76 RHPHIIKLYQ 85
>SB_23777| Best HMM Match : Pkinase (HMM E-Value=0.065)
Length = 97
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 462 IGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLSTADLKREATICHMLKHPHIVEL 641
IG+G + +V +C H++ + K ++ L RE + LKHP++V L
Sbjct: 10 IGEGSYGVVFKCRHKETGQIVAIKKFVESED---DPLIKKIAMREVKMLKQLKHPNLVNL 66
Query: 642 LE 647
LE
Sbjct: 67 LE 68
>SB_17071| Best HMM Match : Pkinase (HMM E-Value=0.065)
Length = 97
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 462 IGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLSTADLKREATICHMLKHPHIVEL 641
IG+G + +V +C H++ + K ++ L RE + LKHP++V L
Sbjct: 10 IGEGSYGVVFKCRHKETGQIVAIKKFVESED---DPLIKKIAMREVKMLKQLKHPNLVNL 66
Query: 642 LE 647
LE
Sbjct: 67 LE 68
>SB_4962| Best HMM Match : FAD_binding_4 (HMM E-Value=5.7e-31)
Length = 916
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +3
Query: 444 YELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLSTADLKREATICHMLKH 623
Y L E +G+G +V+ VH Q + K+ + L + T ++RE I +++H
Sbjct: 12 YILQETLGRGQTGVVKLGVHCQTRKKVAVKII--DRTKLSEQVLTK-VEREIAIMKLIEH 68
Query: 624 PHIVELLE 647
PH++ L +
Sbjct: 69 PHVLGLYD 76
>SB_3163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 444 YELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPAS-LLVPGLSTADLKREATICHMLK 620
+++ + IG G F++V++C + K S L G++ + REAT+ +
Sbjct: 17 FDIGDEIGSGQFAVVKKCSEKSSGLEFAAKFMKKRRSKALRRGVTLEQIIREATVLRSVA 76
Query: 621 HPHIVEL 641
H I+ L
Sbjct: 77 HQGIIYL 83
>SB_42288| Best HMM Match : Transglut_N (HMM E-Value=9.2e-34)
Length = 686
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 551 SGPHPQFSLQTVVLLPVHTATNQTEWTL 468
+G PQ S T+V + HTAT + W++
Sbjct: 78 TGERPQQSKGTIVRIKEHTATTRGSWSM 105
>SB_33716| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 922
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +3
Query: 432 FDDVYELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLL----VPGLSTADLKREA 599
+D+ Y + IGKG F V+ R + + K ++ A +L V G ++ E
Sbjct: 582 YDEKYLTLKSIGKGAFGFVQMARRRADMSEVVVK-FIRKAKILPDCWVEG-PMGNVPLEI 639
Query: 600 TICHMLKHPHIVELLE 647
+ LKHP+IV++L+
Sbjct: 640 ALLAKLKHPNIVKMLD 655
>SB_37321| Best HMM Match : Pkinase (HMM E-Value=2.4e-27)
Length = 592
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +3
Query: 435 DDVYELCEIIGKGPFSLVRRCVHR 506
D+ Y++ + IG+G +++VRR H+
Sbjct: 142 DNFYDIHDQIGRGQYAVVRRVTHK 165
>SB_11460| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 323
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +3
Query: 444 YELCEIIGKGPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLSTADLKREATICHMLKH 623
Y+L +++GKG +++VR+ ++ + K+ T L RE + +K+
Sbjct: 52 YQLGDVLGKGSYAVVRKANSKRYKRDVAIKIIC--KKKAPEDFLTKFLPREIKVLKKIKN 109
Query: 624 PHIVELLE 647
++ LLE
Sbjct: 110 TYVTTLLE 117
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,789,042
Number of Sequences: 59808
Number of extensions: 328738
Number of successful extensions: 769
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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