Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0601
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    83   6e-18
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    26   0.89 
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    26   1.2  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   4.8  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 83.4 bits (197), Expect = 6e-18
 Identities = 38/59 (64%), Positives = 44/59 (74%)
 Frame = +3

Query: 471 GPFSLVRRCVHRQQHNSLQ*KLWMWPASLLVPGLSTADLKREATICHMLKHPHIVELLE 647
           GPFS+VRRC+HR+ +     K+         PGLST+DLKREATICHMLKHPHIVELLE
Sbjct: 1   GPFSIVRRCIHRESNQQFAVKIVDVAKFTASPGLSTSDLKREATICHMLKHPHIVELLE 59


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 26.2 bits (55), Expect = 0.89
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 499 CTGNSTTVCSENCGCG 546
           C+G ST VC  +C CG
Sbjct: 227 CSGISTEVCRRSCYCG 242


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 407 YTSYDHCVSGKNINKHFSTAFDPFQGW 327
           Y  Y H  SGK++N+    AF P   W
Sbjct: 594 YAVYKH--SGKSLNEKIKNAFKPTAAW 618


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 487 FVAVCTGNSTTVCSENCGC 543
           F + C  N  T+C E C C
Sbjct: 799 FCSWCKRNGLTICIEKCYC 817


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,712
Number of Sequences: 2352
Number of extensions: 11654
Number of successful extensions: 40
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)