Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0600
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   1.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.3  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   3.0  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   3.0  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   5.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.3  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.3  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = +3

Query: 252 YTGKEDAAN--NYARGHYTIGKEIVDLVLDRIRKLADQCTG 368
           Y   + A N  +YAR     G  IVD+ LD  R L   CTG
Sbjct: 381 YEDPDTAGNKASYARAKGLGGIAIVDITLDDFRGL---CTG 418


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -2

Query: 354 QRACGFCPKPNLRFPFQWCSDHGHSCW 274
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +1

Query: 598 HL*HLPP*SRH*APNLHQPEIVSSG 672
           H  H+PP S   A N   PE V SG
Sbjct: 52  HHSHMPPHSVFAANNAEFPEFVHSG 76


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +1

Query: 598 HL*HLPP*SRH*APNLHQPEIVSSG 672
           H  H+PP S   A N   PE V SG
Sbjct: 52  HHSHMPPHSVFAANNAEFPEFVHSG 76


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 167 RGTCLPAPVSLKKVLKES 114
           RGTC P    LKK L ++
Sbjct: 53  RGTCSPDGEELKKALPDA 70


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 620  YGGRCHRWLHC 588
            Y G C R+LHC
Sbjct: 1287 YPGDCTRYLHC 1297


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = -2

Query: 297 SDHGHSCWPHLPYQYKLFWMKQLSVCASADLINN 196
           S +G    PH P    +    QLS C    L NN
Sbjct: 230 SQYGSWFLPHQPIYPAVTATVQLSTCTRTTLKNN 263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,769
Number of Sequences: 336
Number of extensions: 3552
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)