Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0600
(676 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 185 2e-47
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 185 2e-47
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 184 5e-47
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 184 5e-47
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 171 5e-43
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 171 5e-43
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 164 4e-41
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 81 5e-16
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 79 2e-15
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 79 4e-15
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 79 4e-15
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 78 6e-15
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 77 1e-14
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 77 1e-14
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 76 2e-14
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 76 2e-14
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 75 3e-14
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 74 8e-14
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 30 1.6
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.1
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 2.8
At5g18490.1 68418.m02181 expressed protein 28 6.6
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 27 8.7
At1g48460.1 68414.m05417 expressed protein 27 8.7
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 27 8.7
At1g18260.1 68414.m02277 suppressor of lin-12-like protein-relat... 27 8.7
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 185 bits (451), Expect = 2e-47
Identities = 78/85 (91%), Positives = 85/85 (100%)
Frame = +1
Query: 1 VGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 180
+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKHVPRAVFV
Sbjct: 9 IGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFV 68
Query: 181 DLEPTVVDEVRTGTYRQLFHPEQLI 255
DLEPTV+DEVRTGTYRQLFHPEQLI
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLI 93
Score = 124 bits (300), Expect = 4e-29
Identities = 58/81 (71%), Positives = 65/81 (80%)
Frame = +3
Query: 255 TGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLL 434
+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL
Sbjct: 94 SGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Query: 435 MERLSVDYGKKSKLEFAIYPA 497
+ERLSVDYGKKSKL F +YP+
Sbjct: 154 LERLSVDYGKKSKLGFTVYPS 174
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/49 (73%), Positives = 45/49 (91%)
Frame = +2
Query: 509 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 655
T+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L IERPTYTNL
Sbjct: 179 TSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNL 227
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 185 bits (451), Expect = 2e-47
Identities = 78/85 (91%), Positives = 85/85 (100%)
Frame = +1
Query: 1 VGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 180
+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKHVPRAVFV
Sbjct: 9 IGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFV 68
Query: 181 DLEPTVVDEVRTGTYRQLFHPEQLI 255
DLEPTV+DEVRTGTYRQLFHPEQLI
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLI 93
Score = 124 bits (300), Expect = 4e-29
Identities = 58/81 (71%), Positives = 65/81 (80%)
Frame = +3
Query: 255 TGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLL 434
+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL
Sbjct: 94 SGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Query: 435 MERLSVDYGKKSKLEFAIYPA 497
+ERLSVDYGKKSKL F +YP+
Sbjct: 154 LERLSVDYGKKSKLGFTVYPS 174
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/49 (73%), Positives = 45/49 (91%)
Frame = +2
Query: 509 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 655
T+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L IERPTYTNL
Sbjct: 179 TSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNL 227
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 184 bits (448), Expect = 5e-47
Identities = 78/85 (91%), Positives = 84/85 (98%)
Frame = +1
Query: 1 VGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 180
+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVPRAVFV
Sbjct: 9 IGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFV 68
Query: 181 DLEPTVVDEVRTGTYRQLFHPEQLI 255
DLEPTV+DEVRTGTYRQLFHPEQLI
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLI 93
Score = 124 bits (300), Expect = 4e-29
Identities = 58/81 (71%), Positives = 65/81 (80%)
Frame = +3
Query: 255 TGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLL 434
+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL
Sbjct: 94 SGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Query: 435 MERLSVDYGKKSKLEFAIYPA 497
+ERLSVDYGKKSKL F +YP+
Sbjct: 154 LERLSVDYGKKSKLGFTVYPS 174
Score = 87.0 bits (206), Expect = 1e-17
Identities = 36/49 (73%), Positives = 46/49 (93%)
Frame = +2
Query: 509 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 655
T+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+IERPTYTNL
Sbjct: 179 TSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNL 227
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 184 bits (448), Expect = 5e-47
Identities = 78/85 (91%), Positives = 84/85 (98%)
Frame = +1
Query: 1 VGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 180
+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVPRAVFV
Sbjct: 9 IGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFV 68
Query: 181 DLEPTVVDEVRTGTYRQLFHPEQLI 255
DLEPTV+DEVRTGTYRQLFHPEQLI
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLI 93
Score = 124 bits (300), Expect = 4e-29
Identities = 58/81 (71%), Positives = 65/81 (80%)
Frame = +3
Query: 255 TGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLL 434
+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQGFL+F+ LL
Sbjct: 94 SGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Query: 435 MERLSVDYGKKSKLEFAIYPA 497
+ERLSVDYGKKSKL F +YP+
Sbjct: 154 LERLSVDYGKKSKLGFTVYPS 174
Score = 87.0 bits (206), Expect = 1e-17
Identities = 36/49 (73%), Positives = 46/49 (93%)
Frame = +2
Query: 509 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 655
T+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+IERPTYTNL
Sbjct: 179 TSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNL 227
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 171 bits (415), Expect = 5e-43
Identities = 72/85 (84%), Positives = 80/85 (94%)
Frame = +1
Query: 1 VGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 180
+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGKHVPRAVFV
Sbjct: 9 IGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFV 68
Query: 181 DLEPTVVDEVRTGTYRQLFHPEQLI 255
DLEPTV+DEVRTGTYRQLFHPEQLI
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLI 93
Score = 124 bits (299), Expect = 5e-29
Identities = 57/81 (70%), Positives = 65/81 (80%)
Frame = +3
Query: 255 TGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLL 434
+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+ LL
Sbjct: 94 SGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Query: 435 MERLSVDYGKKSKLEFAIYPA 497
+ERLSVDYGKKSKL F IYP+
Sbjct: 154 LERLSVDYGKKSKLGFTIYPS 174
Score = 91.1 bits (216), Expect = 6e-19
Identities = 39/49 (79%), Positives = 46/49 (93%)
Frame = +2
Query: 509 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 655
TAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNL
Sbjct: 179 TAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNL 227
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 171 bits (415), Expect = 5e-43
Identities = 72/85 (84%), Positives = 80/85 (94%)
Frame = +1
Query: 1 VGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 180
+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGKHVPRAVFV
Sbjct: 9 IGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFV 68
Query: 181 DLEPTVVDEVRTGTYRQLFHPEQLI 255
DLEPTV+DEVRTGTYRQLFHPEQLI
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLI 93
Score = 124 bits (299), Expect = 5e-29
Identities = 57/81 (70%), Positives = 65/81 (80%)
Frame = +3
Query: 255 TGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLL 434
+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQGFL+F+ LL
Sbjct: 94 SGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Query: 435 MERLSVDYGKKSKLEFAIYPA 497
+ERLSVDYGKKSKL F IYP+
Sbjct: 154 LERLSVDYGKKSKLGFTIYPS 174
Score = 91.1 bits (216), Expect = 6e-19
Identities = 39/49 (79%), Positives = 46/49 (93%)
Frame = +2
Query: 509 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 655
TAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNL
Sbjct: 179 TAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNL 227
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 164 bits (399), Expect = 4e-41
Identities = 68/85 (80%), Positives = 79/85 (92%)
Frame = +1
Query: 1 VGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 180
+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+HVPRAVF+
Sbjct: 9 IGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVFL 68
Query: 181 DLEPTVVDEVRTGTYRQLFHPEQLI 255
DLEPTV+DEVRTGTYRQLFHPEQLI
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLI 93
Score = 117 bits (282), Expect = 6e-27
Identities = 53/81 (65%), Positives = 64/81 (79%)
Frame = +3
Query: 255 TGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLL 434
+GKEDAANN+ARGHYT+G+EIVD L+R+RKLAD CTGLQGFL+F+ LL
Sbjct: 94 SGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Query: 435 MERLSVDYGKKSKLEFAIYPA 497
+ERLSVD+GKKSKL F IYP+
Sbjct: 154 LERLSVDFGKKSKLGFTIYPS 174
Score = 87.8 bits (208), Expect = 6e-18
Identities = 37/49 (75%), Positives = 45/49 (91%)
Frame = +2
Query: 509 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 655
TAVVEPYNS+L+TH+ LEH+D ++DNEAIYDICRR+LDIERPTY+NL
Sbjct: 179 TAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNL 227
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Frame = +1
Query: 4 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETGAGKHVPRAV 174
GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E G++VPRA+
Sbjct: 10 GQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEASCGRYVPRAI 64
Query: 175 FVDLEPTVVDEVRTGTYRQLFHPEQLI 255
+DLEP +D VRTG Y Q+F P+ +
Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFV 91
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +3
Query: 258 GKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLM 437
G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+
Sbjct: 93 GQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 152
Query: 438 ERLSVDYGKKSKLEFAIYPA 497
++ +Y + L F+++P+
Sbjct: 153 SKIREEYPDRMMLTFSVFPS 172
Score = 54.0 bits (124), Expect = 9e-08
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +2
Query: 515 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 655
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +L
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDL 225
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/84 (40%), Positives = 51/84 (60%)
Frame = +1
Query: 4 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 183
GQ G QIG+ WE+ C EHG+ P G+ D + N +++E G++VPRAV +D
Sbjct: 10 GQCGNQIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGRYVPRAVLMD 68
Query: 184 LEPTVVDEVRTGTYRQLFHPEQLI 255
LEP +D +R+G Y Q+F P+ +
Sbjct: 69 LEPGTMDSIRSGPYGQIFRPDNFV 92
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +3
Query: 258 GKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLM 437
G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+
Sbjct: 94 GQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 153
Query: 438 ERLSVDYGKKSKLEFAIYPA 497
++ +Y + L F+++P+
Sbjct: 154 SKIREEYPDRMMLTFSVFPS 173
Score = 54.4 bits (125), Expect = 7e-08
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +2
Query: 515 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 655
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +L
Sbjct: 180 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDL 226
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/84 (41%), Positives = 49/84 (58%)
Frame = +1
Query: 4 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 183
GQ G QIG WE+ C EHGI P G+ D + + N +++E G+ VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPRAVLMD 67
Query: 184 LEPTVVDEVRTGTYRQLFHPEQLI 255
LEP +D +R+G Y Q F P+ +
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFV 91
Score = 68.5 bits (160), Expect = 4e-12
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +3
Query: 258 GKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLM 437
G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+
Sbjct: 93 GQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 152
Query: 438 ERLSVDYGKKSKLEFAIYPA 497
++ +Y + L F+++P+
Sbjct: 153 SKIREEYPDRMMLTFSVFPS 172
Score = 54.0 bits (124), Expect = 9e-08
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +2
Query: 515 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 655
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +L
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDL 225
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/84 (41%), Positives = 49/84 (58%)
Frame = +1
Query: 4 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 183
GQ G QIG WE+ C EHGI P G+ D + + N +++E G+ VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPRAVLMD 67
Query: 184 LEPTVVDEVRTGTYRQLFHPEQLI 255
LEP +D +R+G Y Q F P+ +
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFV 91
Score = 68.5 bits (160), Expect = 4e-12
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +3
Query: 258 GKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLM 437
G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+
Sbjct: 93 GQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 152
Query: 438 ERLSVDYGKKSKLEFAIYPA 497
++ +Y + L F+++P+
Sbjct: 153 SKIREEYPDRMMLTFSVFPS 172
Score = 54.0 bits (124), Expect = 9e-08
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +2
Query: 515 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 655
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +L
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDL 225
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 77.8 bits (183), Expect = 6e-15
Identities = 36/84 (42%), Positives = 50/84 (59%)
Frame = +1
Query: 4 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 183
GQ G QIG WE+ C EHGI GQ D + + N +F+E GK+VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGKYVPRAVLMD 67
Query: 184 LEPTVVDEVRTGTYRQLFHPEQLI 255
LEP +D +R+G + Q+F P+ +
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFV 91
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/80 (36%), Positives = 47/80 (58%)
Frame = +3
Query: 258 GKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLM 437
G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+
Sbjct: 93 GQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 152
Query: 438 ERLSVDYGKKSKLEFAIYPA 497
++ +Y + + F+++P+
Sbjct: 153 SKIREEYPDRMMMTFSVFPS 172
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/47 (48%), Positives = 34/47 (72%)
Frame = +2
Query: 515 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 655
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +L
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDL 225
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/84 (40%), Positives = 51/84 (60%)
Frame = +1
Query: 4 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 183
GQ G QIG+ WE+ C EHGI G+ D T + N +++E G++VPRAV +D
Sbjct: 10 GQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGRYVPRAVLMD 68
Query: 184 LEPTVVDEVRTGTYRQLFHPEQLI 255
LEP +D +R+G + Q+F P+ +
Sbjct: 69 LEPGTMDSIRSGPFGQIFRPDNFV 92
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +3
Query: 258 GKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLM 437
G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+
Sbjct: 94 GQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 153
Query: 438 ERLSVDYGKKSKLEFAIYPA 497
++ +Y + L F+++P+
Sbjct: 154 SKIREEYPDRMMLTFSVFPS 173
Score = 54.4 bits (125), Expect = 7e-08
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +2
Query: 515 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 655
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +L
Sbjct: 180 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDL 226
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +1
Query: 4 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 183
GQ G QIG+ WE+ LEHGI G+ D + + N +++E G++VPRAV +D
Sbjct: 10 GQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGRYVPRAVLMD 67
Query: 184 LEPTVVDEVRTGTYRQLFHPEQLI 255
LEP +D VR+G Y Q+F P+ +
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFV 91
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/80 (36%), Positives = 47/80 (58%)
Frame = +3
Query: 258 GKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLM 437
G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+
Sbjct: 93 GQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 152
Query: 438 ERLSVDYGKKSKLEFAIYPA 497
++ +Y + + F+++P+
Sbjct: 153 SKIREEYPDRMMMTFSVFPS 172
Score = 54.4 bits (125), Expect = 7e-08
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +2
Query: 515 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 655
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +L
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDL 225
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 76.2 bits (179), Expect = 2e-14
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +1
Query: 4 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 183
GQ G QIG WE+ C EHGI GQ D + + + +F+E GK+VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGKYVPRAVLMD 67
Query: 184 LEPTVVDEVRTGTYRQLFHPEQLI 255
LEP +D +R+G + Q+F P+ +
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFV 91
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/80 (35%), Positives = 46/80 (57%)
Frame = +3
Query: 258 GKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLM 437
G+ A NN+A+GHYT G E++D VLD +RK A+ LQGF + H LL+
Sbjct: 93 GQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLI 152
Query: 438 ERLSVDYGKKSKLEFAIYPA 497
++ +Y + + F+++P+
Sbjct: 153 SKIREEYPDRMMMTFSVFPS 172
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/47 (48%), Positives = 34/47 (72%)
Frame = +2
Query: 515 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 655
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +L
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDL 225
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 75.8 bits (178), Expect = 2e-14
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = +1
Query: 4 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 183
GQ G QIG WE+ C EHGI G+ + + + N +++E G+ VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGRFVPRAVLMD 67
Query: 184 LEPTVVDEVRTGTYRQLFHPEQLI 255
LEP +D VR+G Y Q+F P+ +
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFV 91
Score = 68.5 bits (160), Expect = 4e-12
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +3
Query: 258 GKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLM 437
G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF + H LL+
Sbjct: 93 GQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 152
Query: 438 ERLSVDYGKKSKLEFAIYPA 497
++ +Y + L F+++P+
Sbjct: 153 SKIREEYPDRMMLTFSVFPS 172
Score = 54.0 bits (124), Expect = 9e-08
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +2
Query: 515 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 655
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +L
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDL 225
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 75.4 bits (177), Expect = 3e-14
Identities = 36/86 (41%), Positives = 51/86 (59%)
Frame = +1
Query: 1 VGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 180
VGQ G QIG W+ CLEHGI DG + T GG D + FF + ++PRA+ +
Sbjct: 10 VGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLI 67
Query: 181 DLEPTVVDEVRTGTYRQLFHPEQLIL 258
DLEP V++ ++ G YR L++ E + L
Sbjct: 68 DLEPRVINGIQNGEYRNLYNHENIFL 93
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +3
Query: 270 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 449
A NN+A G++ GK + + ++D I + AD L+GF++ H L+E L+
Sbjct: 100 AGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLN 158
Query: 450 VDYGKKSKLEFAIYP 494
Y KK ++++P
Sbjct: 159 DRYSKKLVQTYSVFP 173
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 515 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLKS 661
VV+PYNS+LT ++DC ++DN A+ I L + PT+ S
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNS 230
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 74.1 bits (174), Expect = 8e-14
Identities = 35/86 (40%), Positives = 51/86 (59%)
Frame = +1
Query: 1 VGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 180
VGQ G QIG W+ CLEHGI DG + T GG D + FF + ++PRA+ +
Sbjct: 10 VGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLI 67
Query: 181 DLEPTVVDEVRTGTYRQLFHPEQLIL 258
DLEP V++ ++ G YR L++ E + +
Sbjct: 68 DLEPRVINGIQNGDYRNLYNHENIFV 93
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +3
Query: 270 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 449
A NN+A G++ GK + + ++D I + AD L+GF++ H L+E L+
Sbjct: 100 AGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLN 158
Query: 450 VDYGKKSKLEFAIYP 494
Y KK ++++P
Sbjct: 159 DRYSKKLVQTYSVFP 173
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 515 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLKS 661
VV+PYNS+LT ++DC ++DN A+ I L + PT+ S
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNS 230
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 55 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 204
E GIQ +G + ++ + G D +T F + A P FV+L+ +D
Sbjct: 881 EGGIQANGSL-SETDVEFGSDESDTDFGDNSASSTTPETTFVELQNEELD 929
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 413 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 315
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -3
Query: 146 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 21
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At5g18490.1 68418.m02181 expressed protein
Length = 553
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = -2
Query: 312 PFQWCSDHGHSCWPHLPYQYKLFWMKQLSVCASADLINNSRFKIDEDSTGYVLASSGLAE 133
P + S HGH+ +PH P Y L +L + D + S++ +D ++A+ L E
Sbjct: 426 PVVYSSKHGHASFPH-PGMY-LQGPSKLGIGVRND-VAKSKYMVDSSQRYRIVAAEYLGE 482
Query: 132 ESV 124
+V
Sbjct: 483 GAV 485
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 27.5 bits (58), Expect = 8.7
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -2
Query: 345 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 256
C P PN + PF+W ++ + ++P++
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 165
>At1g48460.1 68414.m05417 expressed protein
Length = 340
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = -2
Query: 288 GHSCWPHLPYQYKLFWMKQLSVCASADLINNSRFKIDEDSTGYVLASSGLA 136
G SCWP +P ++++ + Q V +A + F + + +T + G+A
Sbjct: 256 GSSCWPIVPIVFEVYRLYQ--VTRAATFVQRLMFMMKDAATTAEITERGVA 304
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 27.5 bits (58), Expect = 8.7
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -2
Query: 345 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 256
C P PN + PF+W ++ + ++P++
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 182
>At1g18260.1 68414.m02277 suppressor of lin-12-like protein-related
/ sel-1 protein-related similar to Sel-1 homolog
precursor (Suppressor of lin-12-like protein)
(Sel-1L)(SP:Q9UBV2) {Homo sapiens}
Length = 678
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 112 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPE 246
+D N+ + G G+ F + EP +E+ G++R +F P+
Sbjct: 34 NDDLNSGGDDNGVGESSDFDEFGESEPKSEEELDPGSWRSIFEPD 78
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,304,152
Number of Sequences: 28952
Number of extensions: 329008
Number of successful extensions: 1090
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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