Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0598
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    25   0.83 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    25   0.83 
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    25   0.83 
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    25   0.83 
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       23   3.3  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   4.4  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   4.4  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   4.4  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   4.4  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   5.8  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   5.8  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   5.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   5.8  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   5.8  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   7.7  

>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 497 RPANPTWQMIRELPESPSKSKGDWM 571
           +PA P  Q I ++P  P  S  DWM
Sbjct: 118 QPAAPGGQPIPDIPRYPWMSITDWM 142



 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 431 RSEQNYTHITVLSLTENFGFNN 366
           R  Q YT    L L + F FN+
Sbjct: 159 RGRQTYTRFQTLELEKEFHFNH 180


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 497 RPANPTWQMIRELPESPSKSKGDWM 571
           +PA P  Q I ++P  P  S  DWM
Sbjct: 177 QPAAPGGQPIPDIPRYPWMSITDWM 201



 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 431 RSEQNYTHITVLSLTENFGFNN 366
           R  Q YT    L L + F FN+
Sbjct: 218 RGRQTYTRFQTLELEKEFHFNH 239


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 497 RPANPTWQMIRELPESPSKSKGDWM 571
           +PA P  Q I ++P  P  S  DWM
Sbjct: 118 QPAAPGGQPIPDIPRYPWMSITDWM 142


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 497 RPANPTWQMIRELPESPSKSKGDWM 571
           +PA P  Q I ++P  P  S  DWM
Sbjct: 177 QPAAPGGQPIPDIPRYPWMSITDWM 201


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 431 RSEQNYTHITVLSLTENFGFNN 366
           R  Q YT    L L + F FN+
Sbjct: 8   RGRQTYTRFQTLELEKEFHFNH 29


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 431 RSEQNYTHITVLSLTENFGFN 369
           R+ Q YT    L L + F FN
Sbjct: 185 RTRQTYTRYQTLELEKEFHFN 205


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 643 YLCFNYLYAADTIFEMISCYN 581
           ++C  + Y  D  + MI+C N
Sbjct: 120 HICDKFYYCVDGKYNMITCPN 140


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 431 RSEQNYTHITVLSLTENFGFN 369
           R+ Q YT    L L + F FN
Sbjct: 185 RTRQTYTRYQTLELEKEFHFN 205


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 431 RSEQNYTHITVLSLTENFGFN 369
           R+ Q YT    L L + F FN
Sbjct: 185 RTRQTYTRYQTLELEKEFHFN 205


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 92  LNPKKNINCSSNIIQNL 142
           LN +  +  SSNI+QNL
Sbjct: 116 LNTQPPVTSSSNILQNL 132


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 92  LNPKKNINCSSNIIQNL 142
           LN +  +  SSNI+QNL
Sbjct: 116 LNTQPPVTSSSNILQNL 132


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 431 RSEQNYTHITVLSLTENFGFN 369
           R  Q YT    L L + F FN
Sbjct: 244 RGRQTYTRYQTLELEKEFHFN 264


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 92  LNPKKNINCSSNIIQNL 142
           LN +  +  SSNI+QNL
Sbjct: 116 LNTQPPVTSSSNILQNL 132


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 431 RSEQNYTHITVLSLTENFGFN 369
           R  Q YT    L L + F FN
Sbjct: 246 RGRQTYTRYQTLELEKEFHFN 266


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 261 DQGLIIILDNGRNVAN 308
           D G ++ILDN  ++ N
Sbjct: 62  DDGSLLILDNATDITN 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,023
Number of Sequences: 336
Number of extensions: 3107
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)