Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0597
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.1  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   4.1  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   4.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.4  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 341 SPACRTPTRPTASAVDETP 397
           SP+  T T  T+SA++ TP
Sbjct: 7   SPSTTTTTTTTSSALNSTP 25


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 341 SPACRTPTRPTASAVDETP 397
           SP+  T T  T+SA++ TP
Sbjct: 7   SPSTTTTTTTTSSALNSTP 25


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 110 HRHSNKCRL*YICIK 66
           H H + CR  YIC++
Sbjct: 172 HAHPDDCRKYYICLE 186


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 110 HRHSNKCRL*YICIK 66
           H H + CR  YIC++
Sbjct: 172 HAHPDDCRKYYICLE 186


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -2

Query: 333 RPPRPRHAQNHRETRTIPIVNERKQT*HTR 244
           R P PR  ++H    T   +N+R +  H +
Sbjct: 42  RQPYPRQKKSHPPQWTWQCINQRCERRHIK 71


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 203 LHCIDYICHLSFLSRVCHV 259
           LH I +IC L  +  VC+V
Sbjct: 110 LHQICHICELHTIFLVCNV 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,870
Number of Sequences: 336
Number of extensions: 2682
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)