Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0597
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 31 0.58
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 31 0.58
Z81048-1|CAB02839.1| 587|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 30 1.8
AB033380-1|BAA92264.1| 587|Caenorhabditis elegans kinesin like ... 30 1.8
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 29 2.3
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 3.1
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 3.1
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF039051-1|AAB94263.2| 167|Caenorhabditis elegans Hypothetical ... 29 3.1
Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical pr... 29 4.1
AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like prot... 29 4.1
Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical pr... 28 5.4
U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protei... 28 5.4
U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protei... 28 5.4
AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein. 28 5.4
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 28 7.1
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 28 7.1
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 28 7.1
Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical p... 27 9.4
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 27 9.4
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 27 9.4
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 31.5 bits (68), Expect = 0.58
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Frame = +2
Query: 338 ASPACRTPTRPTASAVDETPRSAVPT----APASCCP---TASFVSLGAARPSVSVYLRC 496
A+PA PTRPT S PR+ PT P +C P +AS V+ AA V +
Sbjct: 45 ATPAA-PPTRPTPSRSSAAPRATAPTPTAAPPKTCAPPVRSASTVAAAAAAAPPGVDMAT 103
Query: 497 DTSLARIPSTSRRQVT 544
L RQ+T
Sbjct: 104 FNKLKEELEEVTRQLT 119
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 31.5 bits (68), Expect = 0.58
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Frame = +2
Query: 338 ASPACRTPTRPTASAVDETPRSAVPT----APASCCP---TASFVSLGAARPSVSVYLRC 496
A+PA PTRPT S PR+ PT P +C P +AS V+ AA V +
Sbjct: 174 ATPAA-PPTRPTPSRSSAAPRATAPTPTAAPPKTCAPPVRSASTVAAAAAAAPPGVDMAT 232
Query: 497 DTSLARIPSTSRRQVT 544
L RQ+T
Sbjct: 233 FNKLKEELEEVTRQLT 248
>Z81048-1|CAB02839.1| 587|Caenorhabditis elegans Hypothetical
protein C41G7.2 protein.
Length = 587
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +2
Query: 347 ACRTPTRPTASAVDETPRSAVPTAPASCCPTASFVSLGAARPSVSVYLRCDTSLARIPST 526
ACR P+R + + T R+++P A + S +RP++ +T+L ST
Sbjct: 54 ACRPPSRLPGATISATGRASLPERSAMAKTSTS----SHSRPALQSTASRNTTLT-AAST 108
Query: 527 SRRQVTGGRPRTGAVRRA 580
S RQ+ GRP + +R+
Sbjct: 109 S-RQLRTGRPPPPSTQRS 125
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 29.9 bits (64), Expect = 1.8
Identities = 33/109 (30%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
Frame = +2
Query: 344 PACRTPTRPTASAVDETPRSAVPTAPASCCPTASFVSLGAA--RPSVSVYLRCDTSLARI 517
P PT + A+ P AVP A T S + GAA RP+V +R
Sbjct: 270 PFLNAPTVKSKDALLGIPAPAVPRPVAGKPSTRSASTTGAARTRPAVPAVSAPRALTSRA 329
Query: 518 PSTSRRQVTGGRPRTGAVRRANPKLACIGGKHARSKSSYFRDLFPHGNA 664
P+ R T R T A R A P A K A + + R P +A
Sbjct: 330 PAGPARPTT-TRSATPATRTAVPPRATAPPKAAPASKAPTRAPIPARSA 377
>AB033380-1|BAA92264.1| 587|Caenorhabditis elegans kinesin like
protein protein.
Length = 587
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +2
Query: 347 ACRTPTRPTASAVDETPRSAVPTAPASCCPTASFVSLGAARPSVSVYLRCDTSLARIPST 526
ACR P+R + + T R+++P A + S +RP++ +T+L ST
Sbjct: 54 ACRPPSRLPGATISATGRASLPERSAMAKTSTS----SHSRPALQSTASRNTTLT-AAST 108
Query: 527 SRRQVTGGRPRTGAVRRA 580
S RQ+ GRP + +R+
Sbjct: 109 S-RQLRTGRPPPPSTQRS 125
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 359 PTRPTASAVDETPRSAVPTAPASCCPTASFVSLGAARP 472
P+ P +S+ TP P +P S CP++ F S A RP
Sbjct: 1415 PSPPPSSSRFSTP----PVSPVSSCPSSRFSSPSATRP 1448
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 356 TPTRPTASAVDETPRSAVPTAPASCCPTASFVSLGAARPSVSVYLRCDTSLARIPSTSR 532
T T T + TP + V T P++ PT V+ A++P+ T IP+T++
Sbjct: 694 TTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQ---PATTPTTTIPTTTQ 749
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 356 TPTRPTASAVDETPRSAVPTAPASCCPTASFVSLGAARPSVSVYLRCDTSLARIPSTSR 532
T T T + TP + V T P++ PT V+ A++P+ T IP+T++
Sbjct: 750 TTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQ---PATTPTTTIPTTTQ 805
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 356 TPTRPTASAVDETPRSAVPTAPASCCPTASFVSLGAARPSVSVYLRCDTSLARIPSTSR 532
T T T + TP + V T P++ PT V+ A++P+ T IP+T++
Sbjct: 573 TTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQ---PATTPTTTIPTTTQ 628
>AF039051-1|AAB94263.2| 167|Caenorhabditis elegans Hypothetical
protein C14C6.5 protein.
Length = 167
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 407 VPTAPASCCPTASFVSLGAARPSVSVYLRCDTSLARIPST 526
+P A C P + ++ G P VY+ DT+ P+T
Sbjct: 30 MPDANGKCPPGTTMITAGGCCPDNDVYIISDTTTTMAPTT 69
>Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical protein
T06E4.3b protein.
Length = 2514
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 134 SQLILNYYRFEVS**AAQKRQSDLHCIDYI--CHLSFLSRVCHVCLRSFTIGMVRVSLWF 307
++ LN F+ S AQK D H I I C+LS + + + T M+R SL +
Sbjct: 819 TRCFLNRLFFDASSAGAQKPSYDEHRIREITRCYLSHVLSDFNFPNQKITFNMIRPSLLY 878
Query: 308 WA 313
W+
Sbjct: 879 WS 880
>Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical protein
T06E4.3a protein.
Length = 2531
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 134 SQLILNYYRFEVS**AAQKRQSDLHCIDYI--CHLSFLSRVCHVCLRSFTIGMVRVSLWF 307
++ LN F+ S AQK D H I I C+LS + + + T M+R SL +
Sbjct: 819 TRCFLNRLFFDASSAGAQKPSYDEHRIREITRCYLSHVLSDFNFPNQKITFNMIRPSLLY 878
Query: 308 WA 313
W+
Sbjct: 879 WS 880
>AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like protein
protein.
Length = 2514
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 134 SQLILNYYRFEVS**AAQKRQSDLHCIDYI--CHLSFLSRVCHVCLRSFTIGMVRVSLWF 307
++ LN F+ S AQK D H I I C+LS + + + T M+R SL +
Sbjct: 819 TRCFLNRLFFDASSAGAQKPSYDEHRIREITRCYLSHVLSDFNFPNQKITFNMIRPSLLY 878
Query: 308 WA 313
W+
Sbjct: 879 WS 880
>Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical
protein F22B5.7 protein.
Length = 1415
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 365 RPTASAVDETPRSAVPTAPASCCPTASFVS 454
+ TAS +E ++A P AP S P+AS S
Sbjct: 237 KSTASFAEEQAKNAPPVAPTSSTPSASAAS 266
>U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protein
15, isoform a protein.
Length = 780
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/79 (29%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Frame = +2
Query: 341 SPACRTPTRPT---ASAVDETPRSAVPTAPASCCPTASFVSLGAARPSVSVYLRCDTSLA 511
+P R P P SA P V T AS P+A G PS S ++A
Sbjct: 104 TPGYRAPVPPDPQPTSAQARNPPVTVATTQASTTPSAPNPPGGLPAPSASATAAVAAAVA 163
Query: 512 RIPSTSRRQVTGGRPRTGA 568
PS GG+ G+
Sbjct: 164 SFPSPDTSIRPGGQITPGS 182
>U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protein
15, isoform b protein.
Length = 777
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/79 (29%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Frame = +2
Query: 341 SPACRTPTRPT---ASAVDETPRSAVPTAPASCCPTASFVSLGAARPSVSVYLRCDTSLA 511
+P R P P SA P V T AS P+A G PS S ++A
Sbjct: 101 TPGYRAPVPPDPQPTSAQARNPPVTVATTQASTTPSAPNPPGGLPAPSASATAAVAAAVA 160
Query: 512 RIPSTSRRQVTGGRPRTGA 568
PS GG+ G+
Sbjct: 161 SFPSPDTSIRPGGQITPGS 179
>AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein.
Length = 1415
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 365 RPTASAVDETPRSAVPTAPASCCPTASFVS 454
+ TAS +E ++A P AP S P+AS S
Sbjct: 237 KSTASFAEEQAKNAPPVAPTSSTPSASAAS 266
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 27.9 bits (59), Expect = 7.1
Identities = 31/109 (28%), Positives = 41/109 (37%), Gaps = 2/109 (1%)
Frame = +2
Query: 344 PACRTPTRPTASAVDETPRSAVPTAPASCCPTASFVSLGAA--RPSVSVYLRCDTSLARI 517
P PT + A+ + P AVP A T S + GAA RP++ +R
Sbjct: 292 PFLNAPTVKSKDALLDIPAPAVPRPVAGKPSTRSASTTGAARTRPAIPAVSAPRALTSRA 351
Query: 518 PSTSRRQVTGGRPRTGAVRRANPKLACIGGKHARSKSSYFRDLFPHGNA 664
P T T R A R A P A K A + + R P +A
Sbjct: 352 P-TGPACPTTTRSAAPATRTAVPPRATAPPKAASASKAPIRAPIPAKSA 399
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 673 TPSRIPMREKVTEIRRLRSRVLAANASKLGVSTPNGS 563
TPS+ P R RSR NAS+L STP+ S
Sbjct: 77 TPSKTPSSASARS--RSRSRGRPTNASRLSASTPSAS 111
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/43 (25%), Positives = 17/43 (39%)
Frame = +2
Query: 341 SPACRTPTRPTASAVDETPRSAVPTAPASCCPTASFVSLGAAR 469
+P C+ P+ P T + P C P +F S A +
Sbjct: 164 APQCQQPSAPQCQQCQNTCQQYAPVCQQQCAPQCTFPSAPACQ 206
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -3
Query: 479 TLMVVPPLARQRTPSGSTTPVRSGQQTAVSRLLRKPSDAS 360
T P R PS STTPV++ TA +P +S
Sbjct: 352 TTTTAPETTRTEPPSSSTTPVQNTTTTAPETTSTEPPSSS 391
>Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical
protein F53F4.11 protein.
Length = 543
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 341 SPACRTPTRPTASAVDETPRSAVPTAPA 424
+PA +TP+R T S VD TP PT A
Sbjct: 55 TPAPKTPSRTTKSTVD-TPAPKTPTRAA 81
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = -3
Query: 464 PPLARQRTPSGSTTPVRSGQQTAVSRLLRKPSDASES 354
PP+ + TPS S +P+ S + +L++KP+ +++
Sbjct: 519 PPVEKPVTPSPSASPLPSPVSSPAPQLVQKPTTPTDA 555
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 27.5 bits (58), Expect = 9.4
Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 6/84 (7%)
Frame = +2
Query: 359 PTRPTASAVDETPRSA-----VPTAPASCCPTASF-VSLGAARPSVSVYLRCDTSLARIP 520
PT TA++ T A A A+ PT S S + PS S T +P
Sbjct: 2829 PTTSTAASSSSTANVASMAAMAAAAQAASTPTTSKQASASTSTPSTSAVASAQTPSTSVP 2888
Query: 521 STSRRQVTGGRPRTGAVRRANPKL 592
STS + + NP L
Sbjct: 2889 STSSQAAAAAASSANSGEDINPLL 2912
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,869,706
Number of Sequences: 27780
Number of extensions: 269765
Number of successful extensions: 1036
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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