Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0594
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    68   8e-14
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   0.92 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   8.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   8.6  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 67.7 bits (158), Expect = 8e-14
 Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
 Frame = +1

Query: 238 QNPNSYHWFRLDLRIHDNLALRNAINEAENRKHLLRPIYFLDPNI--KDKVGINRLRFLL 411
           Q+ +  HWFR  LR+HDN +LR  +  A       R ++ LDP       VGIN+ RFLL
Sbjct: 15  QDKHMVHWFRRGLRLHDNPSLREGLKGART----FRCVFVLDPWFAGSSNVGINKWRFLL 70

Query: 412 QSLEXXXXXXXXXXTCLYVLRGKAVDLLPKLF 507
           Q LE          + L+V+RG+  D LPKLF
Sbjct: 71  QCLEDLDRSLRKLNSRLFVIRGQPADALPKLF 102


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 242 FWTFYSFKE*SIINFAETNERFL 174
           ++ +YS  E SIINF  T  +F+
Sbjct: 157 YYIYYSVHEASIINFGYTLAKFM 179


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 608 YTFLLSNVFNVFILLYKLRIYIHLT 534
           YT     +  V   L+K RIYI +T
Sbjct: 642 YTTTEKELLGVIFALHKFRIYIQVT 666


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +3

Query: 507 CDWQVKYLTCQVDIDPEFV 563
           CDW+ K   C V   P  V
Sbjct: 87  CDWKTKVNNCDVIEKPRKV 105


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -2

Query: 396 SIYAYFIF 373
           SIYAYFIF
Sbjct: 85  SIYAYFIF 92


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -2

Query: 396 SIYAYFIF 373
           SIYAYFIF
Sbjct: 85  SIYAYFIF 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,856
Number of Sequences: 336
Number of extensions: 2942
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)