Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0594
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78198-1|CAB01566.1|  107|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z50858-6|CAD44135.1|  949|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AL021567-6|CAD44122.1|  949|Caenorhabditis elegans Hypothetical ...    28   4.9  
AL021567-2|CAD44121.1|  947|Caenorhabditis elegans Hypothetical ...    28   4.9  
AL021567-1|CAA16508.2|  898|Caenorhabditis elegans Hypothetical ...    28   4.9  
Z93393-11|CAB07698.2|  536|Caenorhabditis elegans Hypothetical p...    27   8.5  
AL032655-1|CAA21726.1|  995|Caenorhabditis elegans Hypothetical ...    27   8.5  
AF088285-1|AAC98292.1|  536|Caenorhabditis elegans caspase-relat...    27   8.5  

>Z78198-1|CAB01566.1|  107|Caenorhabditis elegans Hypothetical
           protein F55C5.1 protein.
          Length = 107

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +1

Query: 310 INEAENRKHLLRPIY-FLDPNIKDKVGINRL 399
           +  + N  + +RP+Y F+DP  K K+ INR+
Sbjct: 34  VKSSNNEHYRVRPVYGFIDPKGKTKLDINRI 64


>Z50858-6|CAD44135.1|  949|Caenorhabditis elegans Hypothetical
           protein F21A10.2c protein.
          Length = 949

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 271 DLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGI 390
           D+R+ DN+  + A +  EN + L    YF  P +  K G+
Sbjct: 501 DIRLKDNITEKGAKDALENLQKLRIVDYFYKPEVASKWGL 540


>AL021567-6|CAD44122.1|  949|Caenorhabditis elegans Hypothetical
           protein F21A10.2c protein.
          Length = 949

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 271 DLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGI 390
           D+R+ DN+  + A +  EN + L    YF  P +  K G+
Sbjct: 501 DIRLKDNITEKGAKDALENLQKLRIVDYFYKPEVASKWGL 540


>AL021567-2|CAD44121.1|  947|Caenorhabditis elegans Hypothetical
           protein F21A10.2b protein.
          Length = 947

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 271 DLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGI 390
           D+R+ DN+  + A +  EN + L    YF  P +  K G+
Sbjct: 499 DIRLKDNITEKGAKDALENLQKLRIVDYFYKPEVASKWGL 538


>AL021567-1|CAA16508.2|  898|Caenorhabditis elegans Hypothetical
           protein F21A10.2a protein.
          Length = 898

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 271 DLRIHDNLALRNAINEAENRKHLLRPIYFLDPNIKDKVGI 390
           D+R+ DN+  + A +  EN + L    YF  P +  K G+
Sbjct: 450 DIRLKDNITEKGAKDALENLQKLRIVDYFYKPEVASKWGL 489


>Z93393-11|CAB07698.2|  536|Caenorhabditis elegans Hypothetical
           protein Y48E1B.13a protein.
          Length = 536

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 493 IDPQLFLSKHTDKCLISLNCYLNLLSF 413
           ID   F ++ T K  ISL+CY  L+S+
Sbjct: 153 IDSVDFWNRFTSKATISLDCYSRLISY 179


>AL032655-1|CAA21726.1|  995|Caenorhabditis elegans Hypothetical
           protein Y6B3B.3 protein.
          Length = 995

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 614 NEYTFLLSNVFNVFILLYKLRIYIHLTC 531
           ++++ LL ++ N F L   LR++ H TC
Sbjct: 163 HDFSNLLKDIKNKFFLRIILRVFFHFTC 190


>AF088285-1|AAC98292.1|  536|Caenorhabditis elegans caspase-related
           protein 1A protein.
          Length = 536

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 493 IDPQLFLSKHTDKCLISLNCYLNLLSF 413
           ID   F ++ T K  ISL+CY  L+S+
Sbjct: 153 IDSVDFWNRFTSKATISLDCYSRLISY 179


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,369,916
Number of Sequences: 27780
Number of extensions: 257769
Number of successful extensions: 564
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)