Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0590
         (664 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q59QW6 Cluster: Putative uncharacterized protein; n=1; ...    34   2.7  
UniRef50_A5K8C1 Cluster: Putative uncharacterized protein; n=1; ...    33   6.1  
UniRef50_Q8T358 Cluster: Putative cyclin 2; n=2; Plasmodium falc...    33   8.1  
UniRef50_Q5KP96 Cluster: Calcium transporting ATPase, putative; ...    33   8.1  

>UniRef50_Q59QW6 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 106

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
 Frame = -3

Query: 386 VHVRAST--HFIYTPTKFNYYIDKVYYHCYFLMCWSVIVMPLFRNDEI*SAF------FN 231
           +H+  ST  H I  PT   +Y+    +HCY + C  +  +   +N      F      FN
Sbjct: 20  IHLFGSTPPHPISPPTGTGFYL----FHCY-IPCVCLFFVFFIKNSFFIFIFNFQFSIFN 74

Query: 230 F-ILICNYYFYCLFLQ-FLPYPPYSLFLV 150
           F   I ++ F+ L+L  FL + PYSLFLV
Sbjct: 75  FPFSIFDFRFFVLYLYLFLSFIPYSLFLV 103


>UniRef50_A5K8C1 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 3459

 Score = 33.1 bits (72), Expect = 6.1
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -3

Query: 335  YYIDKVYYHCYFLMCWSVIVMPLFRNDEI*SAFFNFILICNYYFYCL 195
            Y  + V Y C+FL+C S I+   +      S F N + + N +FYC+
Sbjct: 2594 YISNDVKYKCFFLLCLSKILSNFYN-----SHFVNDLKLRNVFFYCI 2635


>UniRef50_Q8T358 Cluster: Putative cyclin 2; n=2; Plasmodium
            falciparum|Rep: Putative cyclin 2 - Plasmodium falciparum
          Length = 1743

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
 Frame = -2

Query: 645  HLVLLKSHYAQDSNFESLATLVNQSHN---PWLARDLKSAFETKNNFGLCCTNNY--CLI 481
            H+ ++K +    S++  + +  N SHN   P  ++  K+  + KNN+ +   NNY    I
Sbjct: 1327 HITIIKKYEQNYSHY--IMSKFNNSHNTQDPSYSKKSKNKNKNKNNYNMTNNNNYENPTI 1384

Query: 480  YKRSNKQ 460
             K+SNK+
Sbjct: 1385 VKKSNKE 1391


>UniRef50_Q5KP96 Cluster: Calcium transporting ATPase, putative; n=4;
            Eukaryota|Rep: Calcium transporting ATPase, putative -
            Cryptococcus neoformans (Filobasidiella neoformans)
          Length = 1326

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = -3

Query: 425  SARCRTATPRRAIVHVRASTHFIYTPTKFNYYIDKVYYHCYFLMCWSVIVMPLFRND 255
            SAR     P+  + H+    +F +TP +F Y++   +YH   L  +SV+V   F ND
Sbjct: 1092 SARMLDRYPQ--LYHLGQQNYF-FTPIRFFYWVGNAFYHSVLLFAFSVLV---FYND 1142


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,686,601
Number of Sequences: 1657284
Number of extensions: 7809906
Number of successful extensions: 17687
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17656
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)