Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0586
         (605 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50300-4|AAC48111.1|  351|Caenorhabditis elegans Serpentine rece...    30   1.1  
AF014939-7|AAB63929.2|  343|Caenorhabditis elegans Serpentine re...    30   1.1  
AL021175-5|CAA15967.1|  357|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z66522-4|CAC70090.1|  349|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr...    28   4.5  

>U50300-4|AAC48111.1|  351|Caenorhabditis elegans Serpentine
           receptor, class h protein201 protein.
          Length = 351

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 146 HIIYYINAKVCIFGCFLLIYAITTCA*NSMKFYLKIVIAWIKAF-YNDTYFFI 301
           HI+  I   +   G F +++  T     S+KFYL ++  W+ AF Y+ T F I
Sbjct: 30  HIVSVIATPIHSLGLFCILFK-TPDQMKSIKFYLLVLHIWVMAFDYSLTLFTI 81


>AF014939-7|AAB63929.2|  343|Caenorhabditis elegans Serpentine
           receptor, class h protein192 protein.
          Length = 343

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 17/53 (32%), Positives = 30/53 (56%)
 Frame = +2

Query: 146 HIIYYINAKVCIFGCFLLIYAITTCA*NSMKFYLKIVIAWIKAFYNDTYFFIT 304
           HI+  I+  +  FG + +IY  T     ++K+YL  +  WI AF + ++ F+T
Sbjct: 23  HIVTVISIPIHFFGMYCIIYK-TPVVMKTVKWYLFALHVWIIAF-DYSFSFLT 73


>AL021175-5|CAA15967.1|  357|Caenorhabditis elegans Hypothetical
           protein Y6E2A.6 protein.
          Length = 357

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +2

Query: 146 HIIYYINAKVCIFGCFLLIYAITTCA*NSMKFYLKIVIAWIKAFYNDTYFFI 301
           HI+  I   V IFG F++++       N  K  + I++  +  F+ D YF I
Sbjct: 20  HILSCIQTPVNIFGTFIIVFKTPK---NMEKVKISILLMHLTCFWLDIYFNI 68


>Z66522-4|CAC70090.1|  349|Caenorhabditis elegans Hypothetical
           protein F14E5.6 protein.
          Length = 349

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -2

Query: 496 FPVTTL*NDGQ*IVIRLTIGRIGYRAPPRELNLLTTP*GSVEIASHGYQH 347
           +PVT   N  + ++   TI R G RAP +  N    P G  ++   GY H
Sbjct: 86  YPVTQT-NPIRRLIFAHTIFRHGSRAPSKNANNTYYPRGRGQLTDRGYNH 134


>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
            R10E11.1b protein.
          Length = 2056

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
 Frame = +2

Query: 8    YPVIVKVVCVESSIIVIQKVLLTKLSSIEYE**QKLPLSHPWRCR*HIIYYI--NAKVCI 181
            YPVI++ +CV+     ++  +  K     Y    + P   P+R +    + I    +VC 
Sbjct: 1146 YPVIIRTLCVQDKEAEVKAQMKQK-----YVESNQFPEKFPYRTKAVFAFEIIDGVEVCF 1200

Query: 182  FGCFLLIYAITTCA*NSMKFYL 247
            FG  +  Y     A N+ + Y+
Sbjct: 1201 FGLHVQEYGSACPAPNARRVYI 1222


>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
            R10E11.1a protein.
          Length = 2045

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
 Frame = +2

Query: 8    YPVIVKVVCVESSIIVIQKVLLTKLSSIEYE**QKLPLSHPWRCR*HIIYYI--NAKVCI 181
            YPVI++ +CV+     ++  +  K     Y    + P   P+R +    + I    +VC 
Sbjct: 1135 YPVIIRTLCVQDKEAEVKAQMKQK-----YVESNQFPEKFPYRTKAVFAFEIIDGVEVCF 1189

Query: 182  FGCFLLIYAITTCA*NSMKFYL 247
            FG  +  Y     A N+ + Y+
Sbjct: 1190 FGLHVQEYGSACPAPNARRVYI 1211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,041,656
Number of Sequences: 27780
Number of extensions: 299419
Number of successful extensions: 651
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)