Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0582
(488 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 166 7e-42
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 166 7e-42
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 166 7e-42
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 166 7e-42
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 166 7e-42
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 166 7e-42
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 166 7e-42
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 166 7e-42
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 166 7e-42
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 166 7e-42
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 163 6e-41
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 130 7e-31
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 130 7e-31
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 128 2e-30
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 128 2e-30
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 110 5e-25
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 89 2e-18
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 87 5e-18
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 69 2e-12
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 36 0.012
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 36 0.012
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 31 0.45
U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated p... 28 4.2
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 28 4.2
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 28 4.2
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 28 4.2
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 5.5
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 5.5
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 5.5
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 5.5
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 27 5.5
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 7.3
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 7.3
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 27 7.3
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 27 7.3
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 27 7.3
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 27 7.3
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 9.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 166 bits (404), Expect = 7e-42
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 HIMFETFNTPAMYVA 479
IMFETFNTPAMYVA
Sbjct: 122 QIMFETFNTPAMYVA 136
Score = 130 bits (313), Expect = 7e-31
Identities = 59/62 (95%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQ 252
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 166 bits (404), Expect = 7e-42
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 HIMFETFNTPAMYVA 479
IMFETFNTPAMYVA
Sbjct: 122 QIMFETFNTPAMYVA 136
Score = 128 bits (310), Expect = 2e-30
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQ 252
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 166 bits (404), Expect = 7e-42
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 HIMFETFNTPAMYVA 479
IMFETFNTPAMYVA
Sbjct: 122 QIMFETFNTPAMYVA 136
Score = 130 bits (313), Expect = 7e-31
Identities = 59/62 (95%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQ 252
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 166 bits (404), Expect = 7e-42
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 HIMFETFNTPAMYVA 479
IMFETFNTPAMYVA
Sbjct: 122 QIMFETFNTPAMYVA 136
Score = 130 bits (313), Expect = 7e-31
Identities = 59/62 (95%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQ 252
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 166 bits (404), Expect = 7e-42
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 HIMFETFNTPAMYVA 479
IMFETFNTPAMYVA
Sbjct: 122 QIMFETFNTPAMYVA 136
Score = 130 bits (313), Expect = 7e-31
Identities = 59/62 (95%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQ 252
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 166 bits (404), Expect = 7e-42
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 HIMFETFNTPAMYVA 479
IMFETFNTPAMYVA
Sbjct: 122 QIMFETFNTPAMYVA 136
Score = 127 bits (306), Expect = 5e-30
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQ 252
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 166 bits (404), Expect = 7e-42
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 HIMFETFNTPAMYVA 479
IMFETFNTPAMYVA
Sbjct: 122 QIMFETFNTPAMYVA 136
Score = 130 bits (313), Expect = 7e-31
Identities = 59/62 (95%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQ 252
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 166 bits (404), Expect = 7e-42
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 18 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 77
Query: 435 HIMFETFNTPAMYVA 479
IMFETFNTPAMYVA
Sbjct: 78 QIMFETFNTPAMYVA 92
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 205 MVGMGQKDSYVGDEAQRK 258
MVGMGQKDSYVGDEAQ K
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 166 bits (404), Expect = 7e-42
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 48 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 107
Query: 435 HIMFETFNTPAMYVA 479
IMFETFNTPAMYVA
Sbjct: 108 QIMFETFNTPAMYVA 122
Score = 91.5 bits (217), Expect = 3e-19
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +1
Query: 127 KAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQRK 258
+AGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 166 bits (404), Expect = 7e-42
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 435 HIMFETFNTPAMYVA 479
IMFETFNTPAMYVA
Sbjct: 122 QIMFETFNTPAMYVA 136
Score = 130 bits (313), Expect = 7e-31
Identities = 59/62 (95%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQ 252
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 163 bits (396), Expect = 6e-41
Identities = 71/74 (95%), Positives = 73/74 (98%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 434
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMT 120
Query: 435 HIMFETFNTPAMYV 476
IMFETFNTPAMYV
Sbjct: 121 QIMFETFNTPAMYV 134
Score = 123 bits (297), Expect = 6e-29
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +1
Query: 79 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQRK 258
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 130 bits (313), Expect = 7e-31
Identities = 59/62 (95%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQ 252
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
Score = 58.8 bits (136), Expect = 2e-09
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKI 329
KRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 130 bits (313), Expect = 7e-31
Identities = 59/62 (95%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQ 252
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
Score = 58.8 bits (136), Expect = 2e-09
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKI 329
KRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 128 bits (310), Expect = 2e-30
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQ 252
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
Score = 58.8 bits (136), Expect = 2e-09
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDMEKI 329
KRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 128 bits (310), Expect = 2e-30
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQ 252
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 253 RK 258
K
Sbjct: 61 SK 62
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 255 KRGILTLKYPIEHGIVTNWDDM 320
KRGILTLKYPIEHGIVTNWDDM
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 110 bits (265), Expect = 5e-25
Identities = 45/74 (60%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = +3
Query: 258 RGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 434
RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+
Sbjct: 65 RGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSA 124
Query: 435 HIMFETFNTPAMYV 476
I FETFN PA+Y+
Sbjct: 125 EIFFETFNVPALYI 138
Score = 60.5 bits (140), Expect = 6e-10
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQ 252
+V+DNGSG+ KAGFAG+ P+ F + VGRP++H VM G D ++G +A+
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAE 62
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 89.0 bits (211), Expect = 2e-18
Identities = 38/70 (54%), Positives = 46/70 (65%)
Frame = +3
Query: 270 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFE 449
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 450 TFNTPAMYVA 479
+FN P +Y+A
Sbjct: 140 SFNVPGLYIA 149
Score = 36.7 bits (81), Expect = 0.009
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 73 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 180
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 87.4 bits (207), Expect = 5e-18
Identities = 39/78 (50%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +3
Query: 249 TEKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANRE 425
++ R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NRE
Sbjct: 62 SQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNRE 121
Query: 426 KMTHIMFETFNTPAMYVA 479
KM +MFE + ++YVA
Sbjct: 122 KMFQVMFEQYGFNSIYVA 139
Score = 47.2 bits (107), Expect = 6e-06
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +1
Query: 97 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHHGVMVGMGQKDSYVGDEAQR 255
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E +
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQ 63
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 68.5 bits (160), Expect = 2e-12
Identities = 29/65 (44%), Positives = 43/65 (66%)
Frame = +3
Query: 285 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNTP 464
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 465 AMYVA 479
A Y++
Sbjct: 154 AYYLS 158
Score = 33.5 bits (73), Expect = 0.084
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 82 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 180
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.012
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETF 455
PIE G V NWD ++IW TF + V + LT+ A + + I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.012
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +3
Query: 282 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETF 455
PIE G V NWD ++IW TF + V + LT+ A + + I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 31.1 bits (67), Expect = 0.45
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = -2
Query: 334 CQIFSMSSQLVTIPC-SMGYLRVRIPLFSVPHLLHKS---PSVPYRPSRHDG 191
CQ+FS QLVT+ SMG +++++ + +P L KS P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated
protein 2, isoform d protein.
Length = 286
Score = 27.9 bits (59), Expect = 4.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 410 QGQQREDDPHHVRNIQHARH 469
Q QQ++ PHH ++ QH +H
Sbjct: 61 QDQQQQQQPHHQQHSQHLQH 80
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 27.9 bits (59), Expect = 4.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 410 QGQQREDDPHHVRNIQHARH 469
Q QQ++ PHH ++ QH +H
Sbjct: 1701 QDQQQQQQPHHQQHSQHLQH 1720
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 27.9 bits (59), Expect = 4.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 410 QGQQREDDPHHVRNIQHARH 469
Q QQ++ PHH ++ QH +H
Sbjct: 1802 QDQQQQQQPHHQQHSQHLQH 1821
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 27.9 bits (59), Expect = 4.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 410 QGQQREDDPHHVRNIQHARH 469
Q QQ++ PHH ++ QH +H
Sbjct: 1802 QDQQQQQQPHHQQHSQHLQH 1821
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 152 ASSPAKPALHIPEPLSTTNAATSS 81
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 356 ACRPRGTPSPAH*GSP*PQGQQREDDPHHVRNIQ 457
AC GT SPA GSP PQ D + N Q
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1263
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 152 ASSPAKPALHIPEPLSTTNAATSS 81
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 356 ACRPRGTPSPAH*GSP*PQGQQREDDPHHVRNIQ 457
AC GT SPA GSP PQ D + N Q
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1276
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 152 ASSPAKPALHIPEPLSTTNAATSS 81
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 356 ACRPRGTPSPAH*GSP*PQGQQREDDPHHVRNIQ 457
AC GT SPA GSP PQ D + N Q
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1264
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 152 ASSPAKPALHIPEPLSTTNAATSS 81
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 356 ACRPRGTPSPAH*GSP*PQGQQREDDPHHVRNIQ 457
AC GT SPA GSP PQ D + N Q
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQ 1276
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.5 bits (58), Expect = 5.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 127 KAGFAGDDAPRAVFPSIVGRPRHHG 201
KA + G D P+A F I+G + G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 279 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 380
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 279 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 380
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = -1
Query: 275 EGQDTSFLCASSPT*ESFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTN 96
E S + SPT ++F T P P+ G+ + AS P + + H P+ ++ +
Sbjct: 659 ESWKMSHIVEGSPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPS 718
Query: 95 AAT 87
A++
Sbjct: 719 ASS 721
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = -1
Query: 275 EGQDTSFLCASSPT*ESFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTN 96
E S + SPT ++F T P P+ G+ + AS P + + H P+ ++ +
Sbjct: 659 ESWKMSHIVEGSPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPS 718
Query: 95 AAT 87
A++
Sbjct: 719 ASS 721
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = -1
Query: 275 EGQDTSFLCASSPT*ESFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTN 96
E S + SPT ++F T P P+ G+ + AS P + + H P+ ++ +
Sbjct: 659 ESWKMSHIVEGSPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPS 718
Query: 95 AAT 87
A++
Sbjct: 719 ASS 721
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = -1
Query: 275 EGQDTSFLCASSPT*ESFCPIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTN 96
E S + SPT ++F T P P+ G+ + AS P + + H P+ ++ +
Sbjct: 563 ESWKMSHIVEGSPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPS 622
Query: 95 AAT 87
A++
Sbjct: 623 ASS 625
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +3
Query: 306 NWDDMEKIWHHTFYNE--LRVAPEEHPV 383
+++D++ IWHH Y E L+ E +PV
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,840,778
Number of Sequences: 27780
Number of extensions: 300103
Number of successful extensions: 946
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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