Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0581
(893 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 2e-46
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 2e-46
SB_56| Best HMM Match : Actin (HMM E-Value=0) 183 2e-46
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 183 2e-46
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 2e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 3e-26
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 1e-20
SB_54| Best HMM Match : Actin (HMM E-Value=0) 86 3e-17
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 68 9e-12
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 64 2e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 1e-06
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 47 2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 39 0.005
SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 33 0.31
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.95
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 2.9
SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 2.9
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.9
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 29 3.8
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 29 3.8
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 29 3.8
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_55327| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_16773| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 5.1
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 29 6.7
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 28 8.9
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_12855| Best HMM Match : TPR_2 (HMM E-Value=2.3e-12) 28 8.9
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_12136| Best HMM Match : ResIII (HMM E-Value=0.24) 28 8.9
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 183 bits (445), Expect = 2e-46
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVL 141
Score = 117 bits (282), Expect = 1e-26
Identities = 54/62 (87%), Positives = 58/62 (93%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +1
Query: 511 LYASGRTTGIVLDSRRRWSSHTRAPSTKDTHLPHAILRLGL 633
LYASGRTTGIV+DS +HT P + LPHAI+RL L
Sbjct: 143 LYASGRTTGIVMDS-GDGVTHT-VPIYEGYALPHAIIRLDL 181
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 183 bits (445), Expect = 2e-46
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 116 REKMTQIMFETFNSPAMYVAIQAVL 140
Score = 114 bits (275), Expect = 8e-26
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1
Query: 511 LYASGRTTGIVLDSRRRWSSHTRAPSTKDTHLPHAILRLGL 633
LYASGRTTGIV+DS +HT P + LPHAILRL L
Sbjct: 142 LYASGRTTGIVMDS-GDGVTHT-VPIYEGYALPHAILRLDL 180
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 183 bits (445), Expect = 2e-46
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 116 REKMTQIMFETFNSPAMYVAIQAVL 140
Score = 116 bits (278), Expect = 3e-26
Identities = 53/60 (88%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1
Query: 511 LYASGRTTGIVLDSRRRWSSHTRAPSTKDTHLPHAILRLGL 633
LYASGRTTGIV+DS +HT P + LPHAILRL L
Sbjct: 142 LYASGRTTGIVMDS-GDGVTHT-VPIYEGYALPHAILRLDL 180
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 183 bits (445), Expect = 2e-46
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVL 141
Score = 122 bits (293), Expect = 5e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1
Query: 511 LYASGRTTGIVLDSRRRWSSHTRAPSTKDTHLPHAILRLGL 633
LYASGRTTGIV+DS +HT P + LPHAILRL L
Sbjct: 143 LYASGRTTGIVMDS-GDGVTHT-VPIYEGYALPHAILRLDL 181
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 183 bits (445), Expect = 2e-46
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFN+PAMYVAIQAVL
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAVL 141
Score = 117 bits (282), Expect = 1e-26
Identities = 52/62 (83%), Positives = 58/62 (93%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDS 552
LYASGRTTGIV+DS
Sbjct: 143 LYASGRTTGIVMDS 156
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 116 bits (278), Expect = 3e-26
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +3
Query: 93 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHRAK 272
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 358
+EAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +2
Query: 431 NREKMTQIMFETFNTPAMYVAIQAVL 508
N + M +IMFETFN+PAMYVAIQAVL
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVL 103
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +1
Query: 511 LYASGRTTGIVLDSRRRWSSHTRAPSTKDTHLPHAILRLGL 633
LYASGRTTGIV+DS +HT P + LPHAI+RL L
Sbjct: 105 LYASGRTTGIVMDS-GDGVTHT-VPIYEGYALPHAIIRLDL 143
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 97.5 bits (232), Expect = 1e-20
Identities = 45/101 (44%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Frame = +2
Query: 209 SGRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 385
S + G + L+ +EA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 386 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 508
VLLTE PLNP NREKM ++MFE + +Y+AIQAVL
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVL 144
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 105 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 203
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 86.2 bits (204), Expect = 3e-17
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = +2
Query: 338 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 508
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV+
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVM 2185
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 111 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 212
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 31.5 bits (68), Expect = 0.95
Identities = 21/41 (51%), Positives = 22/41 (53%)
Frame = +1
Query: 511 LYASGRTTGIVLDSRRRWSSHTRAPSTKDTHLPHAILRLGL 633
LYASGRTTG V D SHT P LPHA R+ L
Sbjct: 2187 LYASGRTTGTVFDC-GDGVSHT-VPVYDGYWLPHATQRIDL 2225
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 68.1 bits (159), Expect = 9e-12
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = +2
Query: 386 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL 508
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVL
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVL 166
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +1
Query: 511 LYASGRTTGIVLDSRRRWSSHTRAPSTKDTHLPHAILR 624
LYA+GRTTG+VLD+ SH+ P + +PH+I+R
Sbjct: 168 LYATGRTTGVVLDA-GDGVSHS-VPIYEGFAMPHSIMR 203
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 63.7 bits (148), Expect = 2e-10
Identities = 26/71 (36%), Positives = 45/71 (63%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 475
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 476 PAMYVAIQAVL 508
PA ++ +VL
Sbjct: 63 PAFFLCKNSVL 73
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 96 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 212
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 81 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 227
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 403
+EA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 288 DEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 7e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 209 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 93
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 39.1 bits (87), Expect = 0.005
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = +1
Query: 511 LYASGRTTGIVLDSRRRWSSHTRAPSTKDTHLPHAILRLGL 633
LYASGRTTG+V DS SH P + LPHAILRL L
Sbjct: 21 LYASGRTTGVVFDS-GDGVSH-NVPIYEGYALPHAILRLDL 59
Score = 36.7 bits (81), Expect = 0.025
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2
Query: 452 IMFETFNTPAMYVAIQAVL 508
IMFE FN+PA+YVAIQAVL
Sbjct: 1 IMFEAFNSPAVYVAIQAVL 19
>SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 526
Score = 37.9 bits (84), Expect = 0.011
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 462 KHSTRPPCT-SPSKPCSAVRVRSYHRYRAGLPATVVFPHPCPIYEGYAPPPRHPASWT 632
+H PP T SP PC + HR+ PA+ FPH ++ + PPP +S T
Sbjct: 35 RHHLPPPATASPPTPCIVIISHPLHRHHPPPPASSSFPH--SLHRHHPPPPASSSSPT 90
Score = 35.5 bits (78), Expect = 0.058
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Frame = +3
Query: 462 KHSTRPPCTSPSK-PCSAVRVRSYHRYRAGLPATVVFPHPC------PIYEGYAPPP 611
+H PP +S S PC + HR+ PAT P PC P++ + PPP
Sbjct: 10 RHHPPPPASSSSPTPCYGITPHPLHRHHLPPPATASPPTPCIVIISHPLHRHHPPPP 66
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 36.3 bits (80), Expect = 0.033
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 212 GRDGRYGTEGLLCRNEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 382
GR G + GL N+ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 383 EEHPVLLTEAPLNPKANRE 439
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 456 CSKHSTRPPCTSPSKPCSAVRVRSYHRYRAG 548
C H+ R P T+PS PC V S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.95
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.95
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 412 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 504
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 179 VPLDRGKAPPSGRDGRYGTEGLLCRNEAQSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 352
V L + +GR+ G+ +CR +A ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRKKAP----LITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 353 TFYN 364
T N
Sbjct: 497 TCPN 500
>SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 577 GCGKTTVAGSPARYRWYDRTRTAEHGLDGDVHGGRVECFE 458
G K+ +AG P + Y + T HG+ G + +V+C +
Sbjct: 214 GMQKSCLAGQPEKMDRYSKETTIVHGIFGGYYRSQVQCLK 253
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 224 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 296 PIEHGIVTNWDDMEKIWHHTFYNE 367
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 419 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 282 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 260 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
V+LSH + H M D +HG RS SCET L T
Sbjct: 136 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_55327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 459 SKHSTRPPCTSPSKPCSAVRVRSYHRYRAG 548
S S R P T+PS PC V S Y AG
Sbjct: 492 SGSSAREPSTAPSLPCDLVAATSAKMYLAG 521
>SB_16773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1644
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +2
Query: 221 GRYGTEGLLCRNEA-QSKRGILTLKYPIEHGIVTNWDDMEK-IWHHTFYNELRVAPEEHP 394
G T+ ++ RNEA Q + L L +P H WD++ K ++ + E+ + P P
Sbjct: 112 GIQDTDAVIGRNEALQQTKQYLQL-FPNLHNREQYWDELAKEVYRYIGNKEVPLLPVHRP 170
Query: 395 VLLTEAPLNPKANREKMTQIMFETF 469
V E+ K E+ +++ E F
Sbjct: 171 V-EDESASEKKEKDEQASRVKIEWF 194
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 242 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 132
++LSH + H M D +HG RS SCET L T
Sbjct: 184 IVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 318 VTIPCSMGYLRVRIPLLLCASFLHKSPSVP 229
V PC M LRVR+ C S LH + P
Sbjct: 60 VACPCCMSLLRVRVVCPCCMSVLHVRVACP 89
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 28.7 bits (61), Expect = 6.7
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = -3
Query: 474 VLNVSNMIWVIFSLLALGLRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMG 295
VL N ++++F +LGL A + T C T +L + ++++SQ+ + C +
Sbjct: 44 VLLAPNAMFMVFLFYSLGLAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVS 102
Query: 294 YLRVRIPLLLCASFL 250
R +LL ASF+
Sbjct: 103 VARCFASMLLTASFI 117
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 28.3 bits (60), Expect = 8.9
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -3
Query: 390 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASFL--HKSPSVPYRPS 217
CS + + C + ++V CS + V + ++C+ H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 216 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 124
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_12855| Best HMM Match : TPR_2 (HMM E-Value=2.3e-12)
Length = 567
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +3
Query: 528 YHRYRAGLPATVVFPH-PCPIYEGYAPPPRH 617
Y RYR P + H P P Y G+ P PR+
Sbjct: 510 YPRYRGHTPDPRYYGHTPDPRYHGHTPDPRY 540
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 184 GNTARGASSPAKPALHIPEPLSTT 113
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_12136| Best HMM Match : ResIII (HMM E-Value=0.24)
Length = 1118
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 474 RPPCTSPSKPCSAVRVRSYHRYRAG 548
R P T+PS PC+ V S Y AG
Sbjct: 821 REPSTAPSMPCNLVAATSARMYLAG 845
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,042,808
Number of Sequences: 59808
Number of extensions: 710514
Number of successful extensions: 2511
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 2085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2491
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2562198215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -