Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0581
(893 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 184 2e-48
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 184 2e-48
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 184 2e-48
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 176 6e-46
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 25 2.3
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 25 4.1
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 25 4.1
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 24 7.2
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 24 7.2
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 23 9.5
AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding pr... 23 9.5
AJ439398-1|CAD28124.1| 208|Anopheles gambiae hypothetical prote... 23 9.5
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 184 bits (449), Expect = 2e-48
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFNTPAMYVAIQAVL
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVL 141
Score = 124 bits (299), Expect = 4e-30
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 43.2 bits (97), Expect = 1e-05
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = +1
Query: 511 LYASGRTTGIVLDSRRRWSSHTRAPSTKDTHLPHAILRLGL 633
LYASGRTTGIVLDS SHT P + LPHAILRL L
Sbjct: 143 LYASGRTTGIVLDS-GDGVSHT-VPIYEGYALPHAILRLDL 181
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 184 bits (449), Expect = 2e-48
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFNTPAMYVAIQAVL
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVL 141
Score = 124 bits (299), Expect = 4e-30
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 43.2 bits (97), Expect = 1e-05
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = +1
Query: 511 LYASGRTTGIVLDSRRRWSSHTRAPSTKDTHLPHAILRLGL 633
LYASGRTTGIVLDS SHT P + LPHAILRL L
Sbjct: 143 LYASGRTTGIVLDS-GDGVSHT-VPIYEGYALPHAILRLDL 181
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 184 bits (449), Expect = 2e-48
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +2
Query: 254 NEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 433
+EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 434 REKMTQIMFETFNTPAMYVAIQAVL 508
REKMTQIMFETFNTPAMYVAIQAVL
Sbjct: 117 REKMTQIMFETFNTPAMYVAIQAVL 141
Score = 124 bits (299), Expect = 4e-30
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 43.2 bits (97), Expect = 1e-05
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = +1
Query: 511 LYASGRTTGIVLDSRRRWSSHTRAPSTKDTHLPHAILRLGL 633
LYASGRTTGIVLDS SHT P + LPHAILRL L
Sbjct: 143 LYASGRTTGIVLDS-GDGVSHT-VPIYEGYALPHAILRLDL 181
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 176 bits (429), Expect = 6e-46
Identities = 80/93 (86%), Positives = 85/93 (91%)
Frame = +2
Query: 230 GTEGLLCRNEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 409
G + +EAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GNKDAYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 410 APLNPKANREKMTQIMFETFNTPAMYVAIQAVL 508
APLNPK+NREKMTQIMFETF PA+YVAIQAVL
Sbjct: 109 APLNPKSNREKMTQIMFETFAAPAVYVAIQAVL 141
Score = 115 bits (277), Expect = 2e-27
Identities = 51/62 (82%), Positives = 56/62 (90%)
Frame = +3
Query: 87 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGMRHR 266
MCD++ ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVG +
Sbjct: 1 MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60
Query: 267 AK 272
+K
Sbjct: 61 SK 62
Score = 41.9 bits (94), Expect = 3e-05
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1
Query: 511 LYASGRTTGIVLDSRRRWSSHTRAPSTKDTHLPHAILRLGL 633
LYASGRTTG+VLDS SHT P + LPHAILR+ L
Sbjct: 143 LYASGRTTGVVLDS-GDGVSHT-VPIYEGYALPHAILRMDL 181
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 25.4 bits (53), Expect = 2.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 194 GKAPPSGRDGRYGTEGLLCRNEAQSKRGILTLK 292
G+ P GRDG +G GL + + G+ LK
Sbjct: 344 GQPGPRGRDGNFGPVGLPGQKGDRGSEGLHGLK 376
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 24.6 bits (51), Expect = 4.1
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 312 IPCSMGYLRVRIPLLLCASFLHKSP 238
I C + Y R+ ++CA++ H+ P
Sbjct: 60 ITCQIAYRRIEGDRIVCAAYSHELP 84
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 24.6 bits (51), Expect = 4.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 526 RTTGIVLDSRRRWSSHTRAPSTK 594
R G+V+D++ W SH +TK
Sbjct: 752 RYLGVVIDNQLSWKSHVEYCTTK 774
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.8 bits (49), Expect = 7.2
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -3
Query: 588 RWGTGVGRPPSPGVQ 544
+W TG G+P +PG++
Sbjct: 875 QWTTGAGQPGAPGLK 889
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 23.8 bits (49), Expect = 7.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 535 GIVLDSRRRWSSHTRAPSTKDTHLPHAILRL 627
G+VLD R ++SH R + T L ++R+
Sbjct: 713 GMVLDDRLEYTSHIRYAVERATKLWTTLVRM 743
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 23.4 bits (48), Expect = 9.5
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +1
Query: 418 QPQGQQREDDPDHVRNIQHARHVRRHPSRAPLYASGR 528
QP ++ P H ++ H H H S+ AS R
Sbjct: 168 QPSSYHQQQHPGHSQHHHHHHHHHPHHSQQQHSASPR 204
>AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding
protein AgamOBP55 protein.
Length = 156
Score = 23.4 bits (48), Expect = 9.5
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 81 FKMCDEEVAALVVDNGSGMC 140
+++C E+ A +DNG+ MC
Sbjct: 42 YRVCHEQHATPQMDNGTVMC 61
>AJ439398-1|CAD28124.1| 208|Anopheles gambiae hypothetical protein
protein.
Length = 208
Score = 23.4 bits (48), Expect = 9.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 595 PS*MGHGCGKTTVAGSPARYRWYDRTRT 512
P GH CG+T + R R TRT
Sbjct: 174 PPERGHRCGRTESDNAKTRRRTRHNTRT 201
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 958,478
Number of Sequences: 2352
Number of extensions: 21727
Number of successful extensions: 92
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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