Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0580
         (455 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   1.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.8  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   5.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   5.5  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    20   9.5  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 190 HRQDHRGWRRFFQHFLQRDRSCKHVPR 270
           +R++ +GW+   +H L  ++    VPR
Sbjct: 120 YRENKQGWQNSIRHNLSLNKCFVKVPR 146


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 104 VGQAGVQIGNACWELYCLEHGIQPDGQMPTD 196
           +G+  V +    W LYC   G  P GQ+  D
Sbjct: 345 LGELAVCVNERPWSLYC---GEPPCGQLNPD 372


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 138 QALPIWTPAWPTCTKMHSR 82
           ++ P+  PAW  CT+   R
Sbjct: 184 ESQPMLWPAWVYCTRYSDR 202


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 427  SYDFLSQWCSDHGH 386
            +YDF  QW    GH
Sbjct: 1589 TYDFHGQWDKQTGH 1602


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 203 IGGGDDSFNTFFSETGAASTY 265
           +GGGD S N+      A  TY
Sbjct: 112 LGGGDTSPNSALQRARADKTY 132


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 137 CWELYCLEHGIQPDGQMPTDKT 202
           CW  Y +   +Q  GQ+P  +T
Sbjct: 263 CWSPYIIFDLLQVFGQIPGTQT 284


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +1

Query: 100 TRWPSRSPDR*CLLGALLPGARHPA*WPD 186
           T W   + ++ C+ G L     H   WP+
Sbjct: 117 TCWNGTATEQLCIGGLLYNERTHSCDWPE 145


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 369 RCGQQLCPWSLH 404
           RCG  L P SLH
Sbjct: 701 RCGNHLPPISLH 712


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -2

Query: 436 KTKSYDFLSQWCSDHGHSC 380
           K  +YD + +W  +  +SC
Sbjct: 174 KENTYDAVIKWSPNEDYSC 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,398
Number of Sequences: 336
Number of extensions: 2451
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)