Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0580
(455 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 127 5e-30
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 124 4e-29
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 116 9e-27
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 110 6e-25
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 69 1e-12
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 69 1e-12
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 69 1e-12
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 68 4e-12
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 66 1e-11
03_01_0034 + 318432-318825,318902-319851 66 2e-11
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 65 3e-11
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 63 1e-10
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 47 8e-06
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.58
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 0.77
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 1.3
08_01_0312 + 2764744-2767390,2767632-2767990 29 1.8
07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 29 1.8
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 28 3.1
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 28 3.1
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 27 5.4
10_03_0016 - 7099862-7099967,7100059-7100357,7101862-7102171,710... 27 5.4
06_03_1333 - 29410014-29410052,29410071-29410322,29410601-294106... 27 5.4
12_02_0346 - 17776871-17781445 27 7.2
12_02_0343 - 17748882-17753396 27 7.2
07_01_0284 - 2082249-2082256,2082496-2083009 27 7.2
04_03_0735 + 19141038-19143227 27 7.2
03_05_0246 + 22333172-22333417 27 7.2
03_04_0182 - 18196447-18196482,18197058-18197149,18197262-18197544 27 7.2
12_02_0399 - 18600444-18600591,18600626-18601656 27 9.5
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 27 9.5
06_03_1332 - 29403320-29407804 27 9.5
06_03_1131 + 27872870-27872958,27873036-27873281,27874058-278741... 27 9.5
02_05_0182 + 26530799-26530852,26531677-26532927,26533250-265333... 27 9.5
02_04_0150 - 20215070-20217577 27 9.5
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 127 bits (306), Expect = 5e-30
Identities = 51/63 (80%), Positives = 57/63 (90%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRECI +H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 260 TYP 268
P
Sbjct: 61 HVP 63
Score = 116 bits (280), Expect = 7e-27
Identities = 57/77 (74%), Positives = 62/77 (80%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + KHVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 403 TIGKGNRRIWFLDRIRK 453
TIGK + LDRIRK
Sbjct: 109 TIGKEIVDL-CLDRIRK 124
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 124 bits (298), Expect = 4e-29
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRECI +H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 260 TYP 268
P
Sbjct: 61 HVP 63
Score = 116 bits (279), Expect = 9e-27
Identities = 57/77 (74%), Positives = 61/77 (79%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + KHVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHY 108
Query: 403 TIGKGNRRIWFLDRIRK 453
TIGK + LDRIRK
Sbjct: 109 TIGKEIVDL-CLDRIRK 124
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 116 bits (279), Expect = 9e-27
Identities = 54/77 (70%), Positives = 63/77 (81%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + KHVPRA+FVDLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 403 TIGKGNRRIWFLDRIRK 453
T+GK + LDR+RK
Sbjct: 109 TVGKEIVDL-CLDRVRK 124
Score = 109 bits (262), Expect = 1e-24
Identities = 44/63 (69%), Positives = 52/63 (82%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE I +H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGA
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 260 TYP 268
P
Sbjct: 61 HVP 63
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 110 bits (264), Expect = 6e-25
Identities = 53/80 (66%), Positives = 62/80 (77%)
Frame = +1
Query: 214 RRFFQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 393
R F F S KHVPRA+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KEDAANN+AR
Sbjct: 106 RDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFAR 165
Query: 394 GHYTIGKGNRRIWFLDRIRK 453
GHYT+G+ + LDR+RK
Sbjct: 166 GHYTVGREVVDL-CLDRLRK 184
Score = 79.0 bits (186), Expect = 2e-15
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 196
MRE I +H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 191 TDKTIGGGDDSFNTFFSETGAASTYP 268
+D T G D+FNTFFSET + P
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVP 123
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 69.3 bits (162), Expect = 1e-12
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 244 DRSC-KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
+ SC + VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 233 EASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEG 289
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +2
Query: 62 KKTQIKMRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQ 184
KK + KMRE + + GQ G QIG+ WE+ C EHGI P G+
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGR 215
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 69.3 bits (162), Expect = 1e-12
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 244 DRSC-KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
+ SC + VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 53 EASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQ 184
MRE + + GQ G QIG WE+ C EHGI P G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGR 35
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 69.3 bits (162), Expect = 1e-12
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 244 DRSC-KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
+ SC + VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 53 EASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 44.0 bits (99), Expect = 6e-05
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQ 184
MRE + + GQ G QIG+ WE+ C EHGI P G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGR 35
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 67.7 bits (158), Expect = 4e-12
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 58 RYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 66.1 bits (154), Expect = 1e-11
Identities = 26/52 (50%), Positives = 38/52 (73%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
++VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 58 RYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDL--QLERINVYYNEASGGR 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 65.7 bits (153), Expect = 2e-11
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +1
Query: 244 DRSC-KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
+ SC + VPRAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G
Sbjct: 53 EASCGRFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDL--QLERVNVYYNEASCGR 58
Query: 260 TYP 268
P
Sbjct: 59 FVP 61
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 64.9 bits (151), Expect = 3e-11
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
+ VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 58 RFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 260 TYP 268
P
Sbjct: 59 FVP 61
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 62.9 bits (146), Expect = 1e-10
Identities = 25/52 (48%), Positives = 36/52 (69%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
+HVPRAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G
Sbjct: 58 RHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 41.9 bits (94), Expect = 2e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDG 181
MRE + + GQ G QIG WE+ C EHG+ P G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTG 34
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 46.8 bits (106), Expect = 8e-06
Identities = 25/52 (48%), Positives = 29/52 (55%)
Frame = +2
Query: 83 RECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 238
RE I + VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFF 52
Score = 44.4 bits (100), Expect = 4e-05
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +1
Query: 232 FLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHY 402
F Q D ++PRA+ VDLEP V++ ++ YR L++ E + + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYH 109
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 30.7 bits (66), Expect = 0.58
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 219 SSPPPMVLSVGIWPSGWMPCSR 154
S P P+ LS I SGW+PCSR
Sbjct: 147 SMPYPITLSAVISLSGWLPCSR 168
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 30.3 bits (65), Expect = 0.77
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 216 SPPPMVLSVGIWPSGWMPCSR 154
+P P+ LSV + SGW+PC+R
Sbjct: 149 NPYPVNLSVSVGLSGWLPCAR 169
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 213 PPPMVLSVGIWPSGWMPCSR 154
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 180 ARCPQTRPSGVETILSTLSSARPE 251
+RCPQ RPS + +LS L ARP+
Sbjct: 969 SRCPQERPS-MREVLSMLQEARPK 991
>07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738
Length = 400
Score = 29.1 bits (62), Expect = 1.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 415 LSQWCSDHGHSCWPHLP 365
L ++ S+HGHSCW +P
Sbjct: 24 LVRYISEHGHSCWSSVP 40
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 123 RSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPE 251
++ M A T+ S +S P + PSGV L + SSA PE
Sbjct: 690 QTAMAASQATSISRGASQPLAVPNSMPSGVNFPLQSSSSAPPE 732
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 207 PMVLSVGIWPSGWMPCSR 154
P+ LS I SGW+PCSR
Sbjct: 184 PVTLSAVIGLSGWLPCSR 201
>10_08_0253 -
16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 141 GSFTAWSTASSLMARCPQTRPS-GVETILSTLSSARP 248
GSF+A + A+ L+ARCP R V + ST P
Sbjct: 5 GSFSAAAAAARLLARCPALRADPRVLALASTAGGGGP 41
>10_03_0016 -
7099862-7099967,7100059-7100357,7101862-7102171,
7104402-7105054,7105266-7105554,7106549-7106634
Length = 580
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 336 VSSRTTYYW*GRCGQQLCPWSLHHWE 413
VS+RTTY +C Q CPW +H ++
Sbjct: 239 VSNRTTYKV--KCTQAGCPWRVHGYK 262
>06_03_1333 -
29410014-29410052,29410071-29410322,29410601-29410633,
29411035-29411045,29411420-29415325,29415437-29415920
Length = 1574
Score = 27.5 bits (58), Expect = 5.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 103 VYKDALTHFDLSFFLCLNVELNYN 32
+YK+ HFD++ ++C V LN+N
Sbjct: 313 IYKEVQNHFDVNIWVC--VSLNFN 334
>12_02_0346 - 17776871-17781445
Length = 1524
Score = 27.1 bits (57), Expect = 7.2
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -2
Query: 106 NVYKDALTHFDLSFFLCLNVELNYNQSSFSATEKV 2
++Y++ HF +S ++C++ N N + EK+
Sbjct: 292 HIYEEVKNHFQISVWICVSQNFNANVLAKEIVEKM 326
>12_02_0343 - 17748882-17753396
Length = 1504
Score = 27.1 bits (57), Expect = 7.2
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -2
Query: 106 NVYKDALTHFDLSFFLCLNVELNYNQSSFSATEKV 2
++Y++ HF +S ++C++ N N + EK+
Sbjct: 293 HIYEEVKNHFQISVWICVSQNFNANVLAKEIVEKM 327
>07_01_0284 - 2082249-2082256,2082496-2083009
Length = 173
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -3
Query: 252 APVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 124
+P+ K E PPP + I W P + ++QQ +PI
Sbjct: 63 SPIFAKLAAAEPPPPPSTTAPIIAAPAWAPLLQFAATQQIIPI 105
>04_03_0735 + 19141038-19143227
Length = 729
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +3
Query: 84 VSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELQ 257
V+ +YT K ++ + A + A++ A TRP+GV+T ++ + R + +
Sbjct: 134 VTNGMYTYDKKANKRARKNAAAAAAAAAAAAAAAEATTRPAGVDTFWTSCNRCRMQYE 191
>03_05_0246 + 22333172-22333417
Length = 81
Score = 27.1 bits (57), Expect = 7.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 369 FLTSNKLFWMKQLSVCASADLINNSRFKIDEDSTGYVLAAPVSLKK 232
FL S LF++ L + L N S FKI + +T +V L+K
Sbjct: 13 FLFSVSLFYIPDLMIDWIDPLTNKSTFKIKDTTTSFVEEKKNELEK 58
>03_04_0182 - 18196447-18196482,18197058-18197149,18197262-18197544
Length = 136
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 162 TASSLMARCPQ-TRPSGVETILSTLSSARPELQARTP 269
T S LMA C + P + ++ LSSA P A TP
Sbjct: 40 TLSLLMALCDRGANPEALAALVRELSSAAPPTAATTP 76
>12_02_0399 - 18600444-18600591,18600626-18601656
Length = 392
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 336 VSSRTTYYW*GRCGQQLCPWSLHHWE 413
+S+RTTY +C Q CPW +H ++
Sbjct: 240 ISNRTTYDV--KCTQAGCPWRVHGYK 263
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 26.6 bits (56), Expect = 9.5
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 131 NACWELYCLEHGI 169
N CW+L C+EH +
Sbjct: 467 NLCWKLICMEHAV 479
>06_03_1332 - 29403320-29407804
Length = 1494
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2
Query: 106 NVYKDALTHFDLSFFLCLNVELNYN 32
++YK+ HFD+ ++C V LN+N
Sbjct: 322 HIYKEVHNHFDVKVWVC--VSLNFN 344
>06_03_1131 +
27872870-27872958,27873036-27873281,27874058-27874163,
27874665-27875209,27875455-27875914,27876234-27876319,
27877092-27877194
Length = 544
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = -3
Query: 345 WMKQLSVCASADLINNSRFKIDEDSTGYVLAAPVSLK 235
W++ S+C S+D++NN K ++ +A + LK
Sbjct: 229 WLELQSLCTSSDILNNLNLKNHWMKDFFLASAHLELK 265
>02_05_0182 +
26530799-26530852,26531677-26532927,26533250-26533335,
26533673-26533733
Length = 483
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = -3
Query: 345 WMKQLSVCASADLINNSRFKIDEDSTGYVLAAPVSLK 235
W++ S+C S+D++NN K ++ +A + LK
Sbjct: 100 WLELQSLCTSSDILNNLNIKNHWMKDFFLASAHLELK 136
>02_04_0150 - 20215070-20217577
Length = 835
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/51 (27%), Positives = 20/51 (39%)
Frame = +2
Query: 107 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
G+A V + C L E G+ PD T+K +FF A+
Sbjct: 673 GEAAVTLSRYCAYLVSYEPGLLPDDPEWTEKAYNDVKSGLGSFFRSCSCAT 723
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,640,170
Number of Sequences: 37544
Number of extensions: 294014
Number of successful extensions: 1057
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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