Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0580
(455 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 131 3e-31
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 130 5e-31
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 130 7e-31
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 129 1e-30
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 1e-30
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 128 2e-30
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 2e-30
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 127 4e-30
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 127 5e-30
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 6e-28
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 6e-24
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 1e-23
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 3e-18
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 85 2e-17
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 2e-17
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 84 6e-17
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 78 3e-15
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 69 2e-12
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 69 2e-12
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 68 3e-12
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 67 7e-12
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 59 2e-09
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 33 0.11
SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32) 29 1.4
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028) 27 5.6
SB_25359| Best HMM Match : p450 (HMM E-Value=0) 27 7.4
SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 27 7.4
SB_49595| Best HMM Match : POPLD (HMM E-Value=1.1) 27 7.4
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 27 7.4
SB_35488| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 27 7.4
SB_15517| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) 27 7.4
SB_13703| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33) 27 7.4
SB_1533| Best HMM Match : RVT_1 (HMM E-Value=0.0074) 27 7.4
SB_12847| Best HMM Match : Ocnus (HMM E-Value=9.5) 27 9.7
SB_24478| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_19487| Best HMM Match : dsDNA_bind (HMM E-Value=5.2) 27 9.7
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 131 bits (316), Expect = 3e-31
Identities = 56/63 (88%), Positives = 58/63 (92%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRECI +HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 260 TYP 268
P
Sbjct: 61 HVP 63
Score = 129 bits (311), Expect = 1e-30
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = +2
Query: 83 RECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 262
RECI +HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 263 YP 268
P
Sbjct: 495 VP 496
Score = 122 bits (295), Expect = 1e-28
Identities = 60/77 (77%), Positives = 63/77 (81%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 482 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 541
Query: 403 TIGKGNRRIWFLDRIRK 453
T+GK + LDRIRK
Sbjct: 542 TVGKEIVDL-VLDRIRK 557
Score = 122 bits (294), Expect = 1e-28
Identities = 59/77 (76%), Positives = 63/77 (81%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL+TGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHY 108
Query: 403 TIGKGNRRIWFLDRIRK 453
T+GK + LDRIRK
Sbjct: 109 TVGKEIVDL-VLDRIRK 124
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 130 bits (314), Expect = 5e-31
Identities = 57/65 (87%), Positives = 58/65 (89%)
Frame = +2
Query: 74 IKMRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 253
I RECI VHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 254 ASTYP 268
P
Sbjct: 123 GKHVP 127
Score = 129 bits (312), Expect = 9e-31
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
+RECI +HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 260 TYP 268
P
Sbjct: 646 HVP 648
Score = 129 bits (311), Expect = 1e-30
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = +2
Query: 83 RECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 262
RECI +HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 263 YP 268
P
Sbjct: 574 VP 575
Score = 123 bits (296), Expect = 8e-29
Identities = 61/77 (79%), Positives = 63/77 (81%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 113 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 172
Query: 403 TIGKGNRRIWFLDRIRK 453
TIGK + LDRIRK
Sbjct: 173 TIGKEIVDL-VLDRIRK 188
Score = 122 bits (295), Expect = 1e-28
Identities = 60/77 (77%), Positives = 63/77 (81%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 634 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 693
Query: 403 TIGKGNRRIWFLDRIRK 453
T+GK + LDRIRK
Sbjct: 694 TVGKELIDL-VLDRIRK 709
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTV 300
F F + KHVPRAVFVDLEPTV
Sbjct: 561 FNTFFSETGAGKHVPRAVFVDLEPTV 586
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 130 bits (313), Expect = 7e-31
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRECI +HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 260 TYP 268
P
Sbjct: 61 HVP 63
Score = 121 bits (291), Expect = 3e-28
Identities = 60/77 (77%), Positives = 62/77 (80%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 403 TIGKGNRRIWFLDRIRK 453
TIGK + LDR RK
Sbjct: 109 TIGKEIIDL-VLDRCRK 124
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 129 bits (311), Expect = 1e-30
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = +2
Query: 83 RECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 262
RECI +HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 263 YP 268
P
Sbjct: 61 VP 62
Score = 122 bits (295), Expect = 1e-28
Identities = 60/77 (77%), Positives = 63/77 (81%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 48 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 107
Query: 403 TIGKGNRRIWFLDRIRK 453
T+GK + LDRIRK
Sbjct: 108 TVGKEIIDL-VLDRIRK 123
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 129 bits (311), Expect = 1e-30
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRECI VHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 260 TYP 268
P
Sbjct: 61 HVP 63
Score = 120 bits (290), Expect = 4e-28
Identities = 59/77 (76%), Positives = 61/77 (79%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F S KHVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 403 TIGKGNRRIWFLDRIRK 453
T+GK LDR+RK
Sbjct: 109 TVGK-EMIDTVLDRLRK 124
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 128 bits (309), Expect = 2e-30
Identities = 55/63 (87%), Positives = 57/63 (90%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRECI +HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGA
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 260 TYP 268
P
Sbjct: 61 HVP 63
Score = 81.8 bits (193), Expect = 2e-16
Identities = 47/77 (61%), Positives = 50/77 (64%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + KHVPRAVFVDLEPTVV PEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHY 98
Query: 403 TIGKGNRRIWFLDRIRK 453
TIGK + LDR+RK
Sbjct: 99 TIGK-QQVDQVLDRLRK 114
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 128 bits (309), Expect = 2e-30
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = +2
Query: 83 RECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 262
RECI VHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 263 YP 268
P
Sbjct: 866 VP 867
Score = 126 bits (305), Expect = 7e-30
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2
Query: 83 RECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 262
RECI +HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGA
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 263 YP 268
P
Sbjct: 433 VP 434
Score = 123 bits (296), Expect = 8e-29
Identities = 59/77 (76%), Positives = 63/77 (81%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 420 FNTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 479
Query: 403 TIGKGNRRIWFLDRIRK 453
T+GK I LDR+RK
Sbjct: 480 TVGKEQIDI-VLDRLRK 495
Score = 121 bits (292), Expect = 2e-28
Identities = 59/77 (76%), Positives = 62/77 (80%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + KHVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 853 FNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 912
Query: 403 TIGKGNRRIWFLDRIRK 453
T+GK + LDRIRK
Sbjct: 913 TVGKEMIDL-VLDRIRK 928
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 127 bits (307), Expect = 4e-30
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2
Query: 83 RECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 262
REC+ +HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 263 YP 268
P
Sbjct: 480 VP 481
Score = 121 bits (292), Expect = 2e-28
Identities = 59/77 (76%), Positives = 62/77 (80%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + KHVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 34 FNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 93
Query: 403 TIGKGNRRIWFLDRIRK 453
T+GK I LDR+RK
Sbjct: 94 TVGKQLIEI-VLDRLRK 109
Score = 120 bits (289), Expect = 6e-28
Identities = 57/77 (74%), Positives = 63/77 (81%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + KHVPRAVFVDLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 467 FNTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHY 526
Query: 403 TIGKGNRRIWFLDRIRK 453
T+GK + LDRIRK
Sbjct: 527 TVGKDHIDN-VLDRIRK 542
Score = 101 bits (242), Expect = 3e-22
Identities = 42/48 (87%), Positives = 44/48 (91%)
Frame = +2
Query: 125 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAASTYP 268
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVP 48
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 127 bits (306), Expect = 5e-30
Identities = 55/63 (87%), Positives = 56/63 (88%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRECI VHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 260 TYP 268
P
Sbjct: 61 HVP 63
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVR 315
F F KHVPRAVFVDLEP+VV ++
Sbjct: 49 FNTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 120 bits (289), Expect = 6e-28
Identities = 56/77 (72%), Positives = 64/77 (83%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + KHVPRAVFVDLEPTV+DE+RTGTYRQLFHPEQL++GKEDAANNYARGHY
Sbjct: 14 FNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHY 73
Query: 403 TIGKGNRRIWFLDRIRK 453
T+GK + + LDRIRK
Sbjct: 74 TVGKEHIDL-ALDRIRK 89
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2
Query: 185 MPTDKTIGGGDDSFNTFFSETGAASTYP 268
MP+DKTIGGGDDSFNTFF+ETGA P
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVP 28
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 107 bits (256), Expect = 6e-24
Identities = 49/66 (74%), Positives = 57/66 (86%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKGNRRIWF 435
K+VPRAV VDLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYARGHYTIGK +
Sbjct: 971 KYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEV-V 1029
Query: 436 LDRIRK 453
+D+IRK
Sbjct: 1030 MDKIRK 1035
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 106 bits (254), Expect = 1e-23
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 253
MREC+ +HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETAS 253
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 88.2 bits (209), Expect = 3e-18
Identities = 42/52 (80%), Positives = 45/52 (86%)
Frame = +1
Query: 298 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKGNRRIWFLDRIRK 453
+ DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GK + LDRIRK
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDL-VLDRIRK 61
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 85.4 bits (202), Expect = 2e-17
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +1
Query: 307 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKGNRRIWFLDRIRK 453
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GK + LDRIRK
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDL-VLDRIRK 49
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 85.4 bits (202), Expect = 2e-17
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +1
Query: 307 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKGNRRIWFLDRIRK 453
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GK + LDRIRK
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDL-VLDRIRK 49
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 83.8 bits (198), Expect = 6e-17
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = +1
Query: 307 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKGNRRIWFLDRIRK 453
E+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GK + + LDRIRK
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDL-ALDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 78.2 bits (184), Expect = 3e-15
Identities = 36/49 (73%), Positives = 42/49 (85%)
Frame = +1
Query: 307 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKGNRRIWFLDRIRK 453
EVR GTYR LFHP+QLITGKEDAANNYARGHYT+GK + + L++IRK
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDL-TLEKIRK 49
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 68.5 bits (160), Expect = 2e-12
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
K+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 3 KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 54
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 68.5 bits (160), Expect = 2e-12
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
K+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 271 KYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 322
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = +2
Query: 65 KTQIKMRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 244
K KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNE 266
Query: 245 TGAASTYP 268
P
Sbjct: 267 ATGGKYVP 274
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 68.1 bits (159), Expect = 3e-12
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
K+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 58 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 66.9 bits (156), Expect = 7e-12
Identities = 26/52 (50%), Positives = 38/52 (73%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
K+VPR+V +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 58 KYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 58.8 bits (136), Expect = 2e-09
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
++VPR++ VDLEP +D VR G +F P+ + + AANN+A+GHY+ G
Sbjct: 14 RYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEG 65
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 357
K+VPRA+ VDLEP +D VR+G + Q+F P+ +
Sbjct: 58 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 268 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 387
RAV +D+E VV+ + G +F +QLIT NN+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)
Length = 1027
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 265 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKGNRRI 429
P V+ L T VD+V+TG PEQL+ K++A+ RG + + K + +
Sbjct: 126 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMERGGFQLHKWHSNV 176
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 140 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 244
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +1
Query: 280 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKGNR 423
V +E TV DE G YR E ITGK + + YTI KG++
Sbjct: 39 VRVECTVTDERYQGWYRMDGETENKITGKNFLTDKF----YTIDKGDK 82
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1
Query: 215 LHPRWSCLWASGHQAGCRAPGSKAPSRHYRSGLRLGQ 105
LH ++S L+ G +G ++PG AP RH R+ RL Q
Sbjct: 32 LHFQYSGLYG-GVDSGKQSPGVMAPPRHSRNRNRLSQ 67
>SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028)
Length = 302
Score = 27.5 bits (58), Expect = 5.6
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +3
Query: 309 GPHWHIQTVVSSRTTYYW*GRCGQQLCPWSLHHWERKS 422
G HW+ T + + +W G G + W HW++ +
Sbjct: 258 GKHWYGNTGMETLGQKHWYGNTGMKTLVWK--HWDKNT 293
>SB_25359| Best HMM Match : p450 (HMM E-Value=0)
Length = 1084
Score = 27.1 bits (57), Expect = 7.4
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 265 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKGNRRI 429
P V+ L T VD+V+TG PEQL+ K++A+ G + + K + +
Sbjct: 154 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMESGGFQLHKWHSNV 204
>SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1626
Score = 27.1 bits (57), Expect = 7.4
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 265 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKGNRRI 429
P V+ L T VD+V+TG PEQL+ K++A+ G + + K + +
Sbjct: 767 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMESGGFQLHKWHSNV 817
>SB_49595| Best HMM Match : POPLD (HMM E-Value=1.1)
Length = 1141
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 141 GSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELQA 260
GS A + +S ARC + P G + +SA P+ QA
Sbjct: 956 GSLMALAAGASADARCQREEPRGSTSAQPAGTSAEPDKQA 995
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 141 GSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELQA 260
GS A + +S ARC + P G + +SA P+ QA
Sbjct: 1142 GSLMALAAGASADARCQREEPRGSTSAQPAGTSAEPDKQA 1181
>SB_35488| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1019
Score = 27.1 bits (57), Expect = 7.4
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 265 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKGNRRI 429
P V+ L T VD+V+TG PEQL+ K++A+ G + + K + +
Sbjct: 446 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMESGGFQLHKWHSNV 496
>SB_15517| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05)
Length = 799
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = -3
Query: 273 STGYVLAAPVSLKKVLKESSPP-----PMVLSVGIWPSGW 169
+TGY P LK V E SP V+S +WPS W
Sbjct: 755 ATGYDNIPPRFLKPVANEISPSLTRIFNRVISDSVWPSDW 794
>SB_13703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1358
Score = 27.1 bits (57), Expect = 7.4
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 265 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKGNRRI 429
P V+ L T VD+V+TG PEQL+ K++A+ G + + K + +
Sbjct: 490 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMESGGFQLHKWHSNV 540
>SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33)
Length = 1485
Score = 27.1 bits (57), Expect = 7.4
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 265 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKGNRRI 429
P V+ L T VD+V+TG PEQL+ K++A+ G + + K + +
Sbjct: 680 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMESGGFQLHKWHSNV 730
>SB_1533| Best HMM Match : RVT_1 (HMM E-Value=0.0074)
Length = 503
Score = 27.1 bits (57), Expect = 7.4
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 265 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKGNRRI 429
P V+ L T VD+V+TG PEQL+ K++A+ G + + K + +
Sbjct: 370 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMESGGFQLHKWHSNV 420
>SB_12847| Best HMM Match : Ocnus (HMM E-Value=9.5)
Length = 172
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 250 SGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD-LDSGLANVYKDALTHFD 74
SG+ ++++ R V T G + G ++ + +PA I + + S +YK + H D
Sbjct: 40 SGITKQALMRSVKTTGGSMRGQEMTETQRLMWFISMPAEINNTMQSLTGTIYKTSEQHKD 99
>SB_24478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 747
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 49 HLSIEKNSNQNA*VHLCTRWPSRSPDR*CLLGALLP 156
HLS E Q V+ C RW R P C + +++P
Sbjct: 466 HLSREVGRGQYGVVYACDRWAGRHP---CAIKSVVP 498
>SB_19487| Best HMM Match : dsDNA_bind (HMM E-Value=5.2)
Length = 126
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 285 IDEDSTGYVLAAPVSLKKVLKESS 214
I+EDSTG V+A +KK+ +E S
Sbjct: 3 INEDSTGSVIALQAEIKKLREEVS 26
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,506,036
Number of Sequences: 59808
Number of extensions: 329036
Number of successful extensions: 818
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 920703675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -