Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0580
         (455 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    48   2e-07
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    27   0.024
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    25   1.7  
AJ496389-1|CAD43035.1|  103|Anopheles gambiae mannosyl glycoprot...    23   3.9  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.7  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    22   8.9  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 48.0 bits (109), Expect = 2e-07
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +2

Query: 80  MRECIFVHVGQAGVQIGNACWE 145
           MRECI VHVGQAGVQIGN CW+
Sbjct: 1   MRECISVHVGQAGVQIGNPCWD 22



 Score = 33.9 bits (74), Expect = 0.003
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 135 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELQARTPC 272
           P    T WS AS+   RCP+TR S  E +++  + + P L   + C
Sbjct: 19  PCWDCTVWSMASNRTVRCPRTRRS--EAVMTRSTPSSPRLAQASTC 62


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 27.5 bits (58), Expect(2) = 0.024
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 186 CPQTRPSGVETILSTLSSARPELQARTPCCLR 281
           C   RPS ++   ++ S  RP+L A +  C R
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAANSATCWR 195



 Score = 21.8 bits (44), Expect(2) = 0.024
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 129 VMPAGSFTAWSTASSLMARCPQTRPSGV 212
           V+ AG F AW TA        +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 442 CPKTKSYDFLSQWCSDHGHSCWP 374
           CP  +  D  +  CSD  H C P
Sbjct: 46  CPDQEQLDLRAATCSDATHYCCP 68


>AJ496389-1|CAD43035.1|  103|Anopheles gambiae mannosyl glycoprotein
           transferase protein.
          Length = 103

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +3

Query: 321 HIQTVVSSRTTYYW*GRCGQQLCPWSLHHWE 413
           H   +  +RT +Y   RC +  C +  ++W+
Sbjct: 66  HNMGMAFNRTMWYEIVRCARHFCEYDDYNWD 96


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 109  PSRSPDR*CLLGALLPGARHPA*WPDAHRQDHR 207
            P+  P +  L+  +LP +  PA  P   R+D R
Sbjct: 1107 PAVEPAKKTLVATILPNSAKPAQQPPPLRRDAR 1139


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -1

Query: 236 RKC*KNRLHPRWSCLWASGHQAGCRAPGSKAPSRHYR 126
           RK   +R +PR     + G    CR+P ++  SR  R
Sbjct: 248 RKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTR 284


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,392
Number of Sequences: 2352
Number of extensions: 10268
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)