Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0580
(455 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 118 2e-27
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 118 2e-27
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 118 2e-27
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 116 8e-27
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 114 2e-26
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 111 2e-25
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 111 2e-25
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 111 3e-25
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 110 5e-25
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 110 5e-25
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 108 2e-24
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 107 3e-24
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 107 3e-24
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 107 3e-24
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 103 8e-23
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 103 8e-23
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 69 1e-12
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 69 1e-12
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 69 1e-12
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 69 1e-12
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 69 1e-12
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 67 7e-12
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 59 2e-09
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 59 2e-09
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 35 0.024
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 35 0.024
U64842-2|AAB37084.1| 462|Caenorhabditis elegans Hypothetical pr... 28 2.8
U12787-1|AAA92672.1| 458|Caenorhabditis elegans HMG CoA synthas... 28 2.8
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 2.8
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 8.6
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 118 bits (284), Expect = 2e-27
Identities = 49/63 (77%), Positives = 56/63 (88%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE I +H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 260 TYP 268
P
Sbjct: 61 HVP 63
Score = 116 bits (279), Expect = 8e-27
Identities = 56/77 (72%), Positives = 61/77 (79%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 403 TIGKGNRRIWFLDRIRK 453
TIGK + LDRIR+
Sbjct: 109 TIGKEIIDL-TLDRIRR 124
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 118 bits (284), Expect = 2e-27
Identities = 49/63 (77%), Positives = 56/63 (88%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE I +H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 260 TYP 268
P
Sbjct: 61 HVP 63
Score = 116 bits (279), Expect = 8e-27
Identities = 56/77 (72%), Positives = 61/77 (79%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 403 TIGKGNRRIWFLDRIRK 453
TIGK + LDRIR+
Sbjct: 109 TIGKEIIDL-TLDRIRR 124
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 118 bits (284), Expect = 2e-27
Identities = 49/63 (77%), Positives = 56/63 (88%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE I +H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 260 TYP 268
P
Sbjct: 61 HVP 63
Score = 116 bits (279), Expect = 8e-27
Identities = 56/77 (72%), Positives = 61/77 (79%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 108
Query: 403 TIGKGNRRIWFLDRIRK 453
TIGK + LDRIR+
Sbjct: 109 TIGKEIIDL-TLDRIRR 124
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 116 bits (279), Expect = 8e-27
Identities = 48/62 (77%), Positives = 55/62 (88%)
Frame = +2
Query: 83 RECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 262
RE I +H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 263 YP 268
P
Sbjct: 61 VP 62
Score = 116 bits (279), Expect = 8e-27
Identities = 56/77 (72%), Positives = 61/77 (79%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F S +HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHY
Sbjct: 48 FSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHY 107
Query: 403 TIGKGNRRIWFLDRIRK 453
TIGK + LDRIR+
Sbjct: 108 TIGKEIIDL-TLDRIRR 123
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 114 bits (275), Expect = 2e-26
Identities = 53/77 (68%), Positives = 62/77 (80%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
+ F S KHVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHY
Sbjct: 49 YNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHY 108
Query: 403 TIGKGNRRIWFLDRIRK 453
TIGK + +DR+R+
Sbjct: 109 TIGKELIDV-VMDRVRR 124
Score = 99.5 bits (237), Expect = 1e-21
Identities = 42/63 (66%), Positives = 48/63 (76%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE + +H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 260 TYP 268
P
Sbjct: 61 HVP 63
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 111 bits (267), Expect = 2e-25
Identities = 52/77 (67%), Positives = 62/77 (80%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F S ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 403 TIGKGNRRIWFLDRIRK 453
T+GK LDRIR+
Sbjct: 107 TVGK-ELIDTVLDRIRR 122
Score = 99.1 bits (236), Expect = 1e-21
Identities = 45/63 (71%), Positives = 49/63 (77%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE I +HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 111 bits (267), Expect = 2e-25
Identities = 52/77 (67%), Positives = 62/77 (80%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F S ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 403 TIGKGNRRIWFLDRIRK 453
T+GK LDRIR+
Sbjct: 107 TVGK-ELIDTVLDRIRR 122
Score = 99.1 bits (236), Expect = 1e-21
Identities = 45/63 (71%), Positives = 49/63 (77%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE I +HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 111 bits (266), Expect = 3e-25
Identities = 50/77 (64%), Positives = 60/77 (77%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHY
Sbjct: 54 FNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHY 113
Query: 403 TIGKGNRRIWFLDRIRK 453
TIGK + +DR+R+
Sbjct: 114 TIGKEIIDV-VMDRVRR 129
Score = 99 bits (238), Expect = 8e-22
Identities = 43/64 (67%), Positives = 50/64 (78%)
Frame = +2
Query: 77 KMRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAA 256
+ RE I +HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET A
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 257 STYP 268
P
Sbjct: 65 KHVP 68
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 110 bits (264), Expect = 5e-25
Identities = 51/77 (66%), Positives = 62/77 (80%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 403 TIGKGNRRIWFLDRIRK 453
T+GK LDRIR+
Sbjct: 107 TVGK-ELIDTVLDRIRR 122
Score = 97.9 bits (233), Expect = 3e-21
Identities = 44/63 (69%), Positives = 49/63 (77%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE I +HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 110 bits (264), Expect = 5e-25
Identities = 51/77 (66%), Positives = 62/77 (80%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + ++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 403 TIGKGNRRIWFLDRIRK 453
T+GK LDRIR+
Sbjct: 107 TVGK-ELIDTVLDRIRR 122
Score = 97.9 bits (233), Expect = 3e-21
Identities = 44/63 (69%), Positives = 49/63 (77%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE I +HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 108 bits (259), Expect = 2e-24
Identities = 48/66 (72%), Positives = 58/66 (87%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKGNRRIWF 435
+HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GK
Sbjct: 57 RHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGK-EIIDTT 115
Query: 436 LDRIRK 453
LDRIR+
Sbjct: 116 LDRIRR 121
Score = 83.8 bits (198), Expect = 5e-17
Identities = 40/63 (63%), Positives = 42/63 (66%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE I +HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 260 TYP 268
P
Sbjct: 58 HVP 60
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 107 bits (258), Expect = 3e-24
Identities = 50/76 (65%), Positives = 58/76 (76%)
Frame = +1
Query: 226 QHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT 405
Q F + KHVPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYT
Sbjct: 53 QAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYT 112
Query: 406 IGKGNRRIWFLDRIRK 453
IGK + LDRIRK
Sbjct: 113 IGKELIDV-VLDRIRK 127
Score = 68.9 bits (161), Expect = 2e-12
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +2
Query: 83 RECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSET 247
REC+ +H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSES 59
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 107 bits (258), Expect = 3e-24
Identities = 50/77 (64%), Positives = 61/77 (79%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + ++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 403 TIGKGNRRIWFLDRIRK 453
T+GK LDRIR+
Sbjct: 107 TVGK-ELIDTTLDRIRR 122
Score = 96.7 bits (230), Expect = 7e-21
Identities = 44/63 (69%), Positives = 49/63 (77%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE I +HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 107 bits (258), Expect = 3e-24
Identities = 50/77 (64%), Positives = 61/77 (79%)
Frame = +1
Query: 223 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 402
F F + ++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 403 TIGKGNRRIWFLDRIRK 453
T+GK LDRIR+
Sbjct: 107 TVGK-ELIDTTLDRIRR 122
Score = 96.7 bits (230), Expect = 7e-21
Identities = 44/63 (69%), Positives = 49/63 (77%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE I +HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 103 bits (246), Expect = 8e-23
Identities = 47/66 (71%), Positives = 56/66 (84%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKGNRRIWF 435
KHVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+ +
Sbjct: 66 KHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDV-V 124
Query: 436 LDRIRK 453
+DR+++
Sbjct: 125 MDRVKR 130
Score = 87.0 bits (206), Expect = 6e-18
Identities = 38/62 (61%), Positives = 43/62 (69%)
Frame = +2
Query: 83 RECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 262
RE I +HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 263 YP 268
P
Sbjct: 68 VP 69
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 103 bits (246), Expect = 8e-23
Identities = 47/66 (71%), Positives = 56/66 (84%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKGNRRIWF 435
KHVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+ +
Sbjct: 38 KHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDV-V 96
Query: 436 LDRIRK 453
+DR+++
Sbjct: 97 MDRVKR 102
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2
Query: 146 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAASTYP 268
++CLEHGIQPDG D T ++ NTFF+ET P
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVP 41
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 69.3 bits (162), Expect = 1e-12
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDG 181
MRE + V GQ G QIG+ WE+ EHGIQPDG
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDG 34
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 69.3 bits (162), Expect = 1e-12
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 46.0 bits (104), Expect = 1e-05
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 69.3 bits (162), Expect = 1e-12
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDG 181
MRE + V GQ G QIG+ WE+ EHGIQPDG
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDG 34
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 69.3 bits (162), Expect = 1e-12
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = +1
Query: 250 SCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
S K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G
Sbjct: 56 SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEG 109
Score = 48.0 bits (109), Expect = 3e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 69.3 bits (162), Expect = 1e-12
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = +1
Query: 250 SCKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
S K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G
Sbjct: 56 SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEG 109
Score = 48.0 bits (109), Expect = 3e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 66.9 bits (156), Expect = 7e-12
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
K+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G
Sbjct: 58 KYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEG 109
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 259
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
Query: 260 TYP 268
P
Sbjct: 59 YVP 61
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 58.8 bits (136), Expect = 2e-09
Identities = 24/52 (46%), Positives = 37/52 (71%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQG 109
Score = 41.1 bits (92), Expect = 4e-04
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 196
M+E I V VGQ G QIG WE EHG+Q DG D
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 58.8 bits (136), Expect = 2e-09
Identities = 24/52 (46%), Positives = 37/52 (71%)
Frame = +1
Query: 256 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 411
K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQG 109
Score = 41.1 bits (92), Expect = 4e-04
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = +2
Query: 80 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 196
M+E I V VGQ G QIG WE EHG+Q DG D
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 35.1 bits (77), Expect = 0.024
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +1
Query: 232 FLQRDRSCKHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGH 399
F Q D +VPRAV VDLEP V++ +++ + LF+ + + A NN+A G+
Sbjct: 53 FYQADDD-HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASGY 110
Score = 33.9 bits (74), Expect = 0.056
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 98 VHVGQAGVQIGNACWELYCLEHGIQPDGQ 184
VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 10 VHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 35.1 bits (77), Expect = 0.024
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +1
Query: 232 FLQRDRSCKHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGH 399
F Q D +VPRAV VDLEP V++ +++ + LF+ + + A NN+A G+
Sbjct: 53 FYQADDD-HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASGY 110
Score = 33.9 bits (74), Expect = 0.056
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 98 VHVGQAGVQIGNACWELYCLEHGIQPDGQ 184
VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 10 VHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
>U64842-2|AAB37084.1| 462|Caenorhabditis elegans Hypothetical
protein F25B4.6 protein.
Length = 462
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 286 LEPTVVDEVRTGTYRQLFHPEQLITGKE-DAANNYARGHYTIGKGNRRIWF 435
L T V +V G +L+ P+ + + + NN + G YTIG G +++ F
Sbjct: 6 LSYTPVTDVGIGAI-ELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGF 55
>U12787-1|AAA92672.1| 458|Caenorhabditis elegans HMG CoA synthase
protein.
Length = 458
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 286 LEPTVVDEVRTGTYRQLFHPEQLITGKE-DAANNYARGHYTIGKGNRRIWF 435
L T V +V G +L+ P+ + + + NN + G YTIG G +++ F
Sbjct: 2 LSYTPVTDVGIGAI-ELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGF 51
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 369 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 274
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 179 GQMPTDKTIGGGDDSFNTFFSETGAA 256
GQMPTDK + S NT +S+ A
Sbjct: 156 GQMPTDKNVNSVITSDNTTYSDVTTA 181
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,293,291
Number of Sequences: 27780
Number of extensions: 238326
Number of successful extensions: 639
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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