Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0578
(263 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 1.9
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 1.9
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 1.9
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 1.9
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 1.9
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 1.9
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 1.9
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 1.9
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 1.9
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 1.9
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 1.9
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 21 1.9
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 3.4
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 3.4
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 3.4
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 3.4
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 3.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 3.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 20 4.5
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 19 7.8
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 19 7.8
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 1.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 28 YNLSHNYNTLHYYI 69
YN HNYN L+Y I
Sbjct: 101 YN-KHNYNKLYYNI 113
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 1.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 28 YNLSHNYNTLHYYI 69
YN HNYN L+Y I
Sbjct: 101 YN-KHNYNKLYYNI 113
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 1.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 28 YNLSHNYNTLHYYI 69
YN HNYN L+Y I
Sbjct: 101 YN-KHNYNKLYYNI 113
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 1.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 28 YNLSHNYNTLHYYI 69
YN HNYN L+Y I
Sbjct: 101 YN-KHNYNKLYYNI 113
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 1.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 28 YNLSHNYNTLHYYI 69
YN HNYN L+Y I
Sbjct: 101 YN-KHNYNKLYYNI 113
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 1.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 28 YNLSHNYNTLHYYI 69
YN HNYN L+Y I
Sbjct: 101 YN-KHNYNKLYYNI 113
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 1.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 28 YNLSHNYNTLHYYI 69
YN HNYN L+Y I
Sbjct: 101 YN-KHNYNKLYYNI 113
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 1.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 28 YNLSHNYNTLHYYI 69
YN HNYN L+Y I
Sbjct: 101 YN-KHNYNKLYYNI 113
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 1.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 28 YNLSHNYNTLHYYI 69
YN HNYN L+Y I
Sbjct: 101 YN-KHNYNKLYYNI 113
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 1.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 28 YNLSHNYNTLHYYI 69
YN HNYN L+Y I
Sbjct: 334 YN-KHNYNKLYYNI 346
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 1.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 28 YNLSHNYNTLHYYI 69
YN HNYN L+Y I
Sbjct: 334 YN-KHNYNKLYYNI 346
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.4 bits (43), Expect = 1.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 135 IINKNCQTRHPLKF*IDDEFFGTF 206
II + + P+ IDDEF GT+
Sbjct: 262 IIYLSAKGHRPIDDNIDDEFKGTY 285
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 20.6 bits (41), Expect = 3.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 241 RFLFSNAMTIKKNVPKN 191
R L+S+ +TIK P N
Sbjct: 117 RVLYSSRLTIKAGCPMN 133
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 3.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 25 IYNLSHNYNTLHYY 66
I+N ++NY L YY
Sbjct: 90 IHNNNNNYKKLQYY 103
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 3.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 25 IYNLSHNYNTLHYY 66
I+N ++NY L YY
Sbjct: 90 IHNNNNNYKKLQYY 103
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 20.6 bits (41), Expect = 3.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 25 IYNLSHNYNTLHYY 66
I+N ++NY L YY
Sbjct: 90 IHNNNNNYKKLQYY 103
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 3.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 25 IYNLSHNYNTLHYY 66
I+N ++NY L YY
Sbjct: 90 IHNNNNNYKKLQYY 103
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 20.6 bits (41), Expect = 3.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 25 IYNLSHNYNTLHYY 66
I+N ++NY L YY
Sbjct: 323 IHNNNNNYKKLQYY 336
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 4.5
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 31 NLSHNYNTLHYYI 69
N ++NY LHY I
Sbjct: 326 NYNNNYKPLHYNI 338
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 19.4 bits (38), Expect = 7.8
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -3
Query: 186 HQFKILMDVWSD 151
H+ K+L+ VW D
Sbjct: 62 HRKKVLLSVWWD 73
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 19.4 bits (38), Expect = 7.8
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -3
Query: 186 HQFKILMDVWSD 151
H+ K+L+ VW D
Sbjct: 184 HRKKVLLSVWWD 195
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,141
Number of Sequences: 438
Number of extensions: 1509
Number of successful extensions: 22
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 4887441
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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