Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0577
(598 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 47 4e-04
UniRef50_Q60EF2 Cluster: Putative uncharacterized protein P0599F... 36 0.96
UniRef50_Q8A2K1 Cluster: Putative uncharacterized protein; n=4; ... 34 2.2
UniRef50_UPI000049A350 Cluster: hypothetical protein 60.t00019; ... 33 3.9
UniRef50_UPI0000DB7603 Cluster: PREDICTED: similar to Nuclear po... 33 5.1
UniRef50_UPI0000E4787D Cluster: PREDICTED: similar to NFRKB prot... 33 6.7
UniRef50_A3WL30 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_Q10KM6 Cluster: GDA1/CD39 family protein, expressed; n=... 32 8.9
>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
Length = 191
Score = 46.8 bits (106), Expect = 4e-04
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2
Query: 53 YLLLRWVVDLTAHLVLSGYWSP 118
+LLLRWV +LTAHLVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175
>UniRef50_Q60EF2 Cluster: Putative uncharacterized protein
P0599F04.1; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0599F04.1 - Oryza sativa subsp. japonica (Rice)
Length = 306
Score = 35.5 bits (78), Expect = 0.96
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 241 GRGAGPTRAVSQQILPPVITANYNFASLIFITRCYSPSPRKSIVNICCISLEKLVPAWDS 420
GR AG R + LP TA A+ IF+ RC+ PSPR+S+ + L V A S
Sbjct: 183 GRCAGARRRIWPP-LPSAPTARLG-AAAIFLRRCHLPSPRRSLFFLRHRHLPSTVAALSS 240
Query: 421 NAG-ASLNPNAPDVLSFRPRR 480
+ AS +P+ S RR
Sbjct: 241 SPDQASSSPDLASGTSLGARR 261
>UniRef50_Q8A2K1 Cluster: Putative uncharacterized protein; n=4;
Bacteroides|Rep: Putative uncharacterized protein -
Bacteroides thetaiotaomicron
Length = 356
Score = 34.3 bits (75), Expect = 2.2
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 413 GIRTLVHRSTRTHRTSYPLDHD-DFKLLRLPIVTAQL 520
GIRT++ + R +YP HD DF +L LPI T +
Sbjct: 157 GIRTIIDLRSEEERHNYPQLHDEDFNVLHLPIATGNM 193
>UniRef50_UPI000049A350 Cluster: hypothetical protein 60.t00019;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 60.t00019 - Entamoeba histolytica HM-1:IMSS
Length = 500
Score = 33.5 bits (73), Expect = 3.9
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 304 NYNFASLIFITRCYSPSPRKSIVNICCISLEKLVP 408
NY+ S+ F CY+PS ++ V CCI++ + +P
Sbjct: 97 NYHVVSIHFT--CYNPSNKRGFVTTCCIAIIQTIP 129
>UniRef50_UPI0000DB7603 Cluster: PREDICTED: similar to Nuclear pore
complex protein Nup205 (Nucleoporin Nup205) (205 kDa
nucleoporin); n=1; Apis mellifera|Rep: PREDICTED:
similar to Nuclear pore complex protein Nup205
(Nucleoporin Nup205) (205 kDa nucleoporin) - Apis
mellifera
Length = 1885
Score = 33.1 bits (72), Expect = 5.1
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +1
Query: 319 SLIFITRCYSPSPRKSIV----NICCISLEKLVPAWDSNAGASLNPNAPDVLSFRPRRLQ 486
SLI + C P KS++ +S E W S A + PN P + S++PR +Q
Sbjct: 584 SLIGLVSCGISIPLKSVLIRTLAALVMSSETSFTVWQSLEAAQIVPNIPTISSYQPRGVQ 643
Query: 487 T 489
T
Sbjct: 644 T 644
>UniRef50_UPI0000E4787D Cluster: PREDICTED: similar to NFRKB
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to NFRKB protein - Strongylocentrotus
purpuratus
Length = 1633
Score = 32.7 bits (71), Expect = 6.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 63 LDGWSISQPTWC*AVTGAHRHLQRQCAIHPEI 158
L W+I QP+W V GA R L + + PE+
Sbjct: 476 LSTWAILQPSWAKVVDGAMRFLNGEVTVSPEV 507
>UniRef50_A3WL30 Cluster: Putative uncharacterized protein; n=1;
Idiomarina baltica OS145|Rep: Putative uncharacterized
protein - Idiomarina baltica OS145
Length = 338
Score = 32.3 bits (70), Expect = 8.9
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +1
Query: 85 SPPGVKRLLEPIDIYNVNALSTLRYEF*GLKYSYNGCPALQTETHYCFTAEIGRGAG 255
S PG++ L + I Y+ A+ LR + G + N C A+ TET F A +G AG
Sbjct: 202 SGPGIENLYQAIAHYHDRAVPPLRAKTIGARALTN-CDAIATETVNQFFASLGSFAG 257
>UniRef50_Q10KM6 Cluster: GDA1/CD39 family protein, expressed; n=4;
Oryza sativa|Rep: GDA1/CD39 family protein, expressed -
Oryza sativa subsp. japonica (Rice)
Length = 508
Score = 32.3 bits (70), Expect = 8.9
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +1
Query: 235 EIGRGAGPTRAVSQQILPPVITANYNFASLIFITRCYSPSPRKSIVNICCISLEKLVPAW 414
E+G + VS ++LPP ++ N+ F + YS S N S +++ +
Sbjct: 207 ELGGASAQLTFVSDEVLPPELSRNFTFGGTTY--TLYSNSFLNFGQNAAQESFREILRSK 264
Query: 415 DSNAGASLNPNAP 453
DS G ++P AP
Sbjct: 265 DSKNGTLVDPCAP 277
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,703,724
Number of Sequences: 1657284
Number of extensions: 13003008
Number of successful extensions: 27283
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27277
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -