Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0577
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   2.6  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   7.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 489 YYVCLLSRLNCLIKK-VHYNFFPNLIFITRFFIPLMH 596
           YY  +L  ++ L+   ++Y ++ +L+F   F I  MH
Sbjct: 242 YYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMH 278



 Score = 21.0 bits (42), Expect = 7.9
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = +1

Query: 379 CCISLEKLVPAWDSNAGASLNPNAPDVLSFRPRRLQTTTSAYC 507
           C +S   L    +  +GASL     D L F+   L+     YC
Sbjct: 19  CTVSNVSLHSLKNKRSGASLQVGILDSLVFKCYNLRRIYYFYC 61


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 112 EPIDI-YNVNALSTLRYEF*GLKYSYNGCPALQTETHYCFTAEIGRGA 252
           E ID+ Y++ AL T+      + Y Y+G    QT  ++     + RGA
Sbjct: 811 EVIDVAYDLPALGTVLDFMSVMTYDYHGAWERQTGHNFTMEYLVSRGA 858


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory
          receptor candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 39 MTTFFIYCLDGWSISQPTW 95
          + TFF+  L  W +  PT+
Sbjct: 12 LNTFFLKALTVWHVENPTY 30


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -3

Query: 455 SGAFGLSDAPAFESQAGTNFSNEIQQMFT 369
           +G +G SDA  +  + G    NE+ ++++
Sbjct: 280 AGTYGGSDAGPYTREMGVIGYNEVCELYS 308


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -3

Query: 434 DAPAFESQAGTNFSNEIQQMFTIDFRGEGE*HRVIKI 324
           D+   E++   +   ++Q+ FT++FR   E  + I I
Sbjct: 691 DSTVEEAKTFVDRCYKMQEQFTLNFRNSDELIKFISI 727


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,696
Number of Sequences: 336
Number of extensions: 3454
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)