Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0575
(643 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 64 1e-11
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 64 2e-11
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 57 2e-09
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 55 1e-08
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 51 1e-07
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 47 2e-06
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 46 4e-06
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 45 8e-06
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 41 1e-04
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 41 2e-04
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 41 2e-04
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 40 4e-04
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 31 0.14
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 27 1.7
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 27 2.3
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 27 2.3
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 26 4.0
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 26 5.3
SPCC1183.04c |pet127||mitochondrial membrane protein Pet127|Schi... 25 7.0
SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharom... 25 9.3
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 64.5 bits (150), Expect = 1e-11
Identities = 29/75 (38%), Positives = 40/75 (53%)
Frame = +3
Query: 18 CPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTGERPYACDICQKR 197
C FT L+ H THT RP+QC +C K FA++ H++ HTG + +AC C +R
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 198 FAVKSYVTAHRWSHV 242
FA + H S V
Sbjct: 637 FARMDALNRHYKSEV 651
Score = 44.4 bits (100), Expect = 1e-05
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = +3
Query: 102 CLKRFAQKSTLNIHKRTHTGERPYACDICQKRFAVKSYVTAHRWSHVADK 251
C KRF + L H THT RP+ C IC+K FA + H H K
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIK 626
Score = 43.6 bits (98), Expect = 2e-05
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 3 FQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTGE 164
FQC C +F + H + HTG + + C C +RFA+ LN H ++ G+
Sbjct: 600 FQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKSEVGQ 653
Score = 36.3 bits (80), Expect = 0.004
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 269 CSMTFTSKSQFALHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVHRDNHSNMSA 436
C+ FT H+ TH ++CS+C +SF R +H R H H+ + A
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFAR-----QHDKRRHEQLHTGIKA 627
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 63.7 bits (148), Expect = 2e-11
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Frame = +3
Query: 15 QCPAAFTCKQYLEIHNRTHTGERPYQCDV--CLKRFAQKSTLNIHKRTHTGERPYAC--D 182
+C ++ LE H RTH+ ERP+ CD C K F +KS L IHKR HT +P++C D
Sbjct: 29 ECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYD 88
Query: 183 ICQKRFAVKSYVTAH 227
C +F + ++ H
Sbjct: 89 GCDAQFYTQQHLERH 103
Score = 49.2 bits (112), Expect = 5e-07
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +3
Query: 18 CPAAFTCKQYLEIHNRTHTGERPYQC--DVCLKRFAQKSTLNIHKRTHTGERPYAC--DI 185
C AF K +L+IH R HT +P+ C D C +F + L H H +PYAC +
Sbjct: 60 CSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEG 119
Query: 186 CQKRFAVKSYVTAH 227
C + F+ + +H
Sbjct: 120 CDECFSKHQQLRSH 133
Score = 44.0 bits (99), Expect = 2e-05
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +3
Query: 18 CPAAFTCKQYLEIHNRTHTGERPYQC--DVCLKRFAQKSTLNIH-KRTHTGERPYACDI- 185
C A F +Q+LE H H +PY C + C + F++ L H HT PY C
Sbjct: 90 CDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQ 149
Query: 186 -CQKRFAVKSYVTAH 227
C+ RFA K + H
Sbjct: 150 DCELRFATKQKLQNH 164
Score = 36.3 bits (80), Expect = 0.004
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = +3
Query: 15 QCPAAFTCKQYLEIHNRTHTGERPYQCDV--CLKRFAQKSTLNIHKRT-HTGERPYACDI 185
Q A + ++ +H T + Y C + C K F + S L H H G + CD
Sbjct: 212 QFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDS 271
Query: 186 CQKRFAVKSYVTAH 227
C +F K + H
Sbjct: 272 CGTKFGYKHMLQRH 285
Score = 30.7 bits (66), Expect = 0.19
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 263 DRCSMTFTSKSQFALHIRTHAAGSCYECSV--CGRSFVRDSYLIRHHNRVH 409
+ C ++ S H+RTH+ + C C ++F R S+L + H R H
Sbjct: 28 EECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHL-KIHKRCH 77
Score = 29.9 bits (64), Expect = 0.33
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 281 FTSKSQFALHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVHR 412
F SQ HIR SC S+CGR F ++L RHH +H+
Sbjct: 188 FEKWSQLQNHIREAHVPSC---SICGRQFKTAAHL-RHHVVLHQ 227
Score = 29.5 bits (63), Expect = 0.43
Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +2
Query: 269 CSMTFTSKSQFALHIRT-HAAGSCYECSVCGRSFVRDSYLIRHHNR 403
C +FT S HI H + C CG F L RH R
Sbjct: 243 CKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLER 288
Score = 28.7 bits (61), Expect = 0.75
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = +2
Query: 269 CSMTFTSKSQFALHIRTHAAGSCYECSV--CGRSFVRDSYLIRHHNRVHR 412
CS F KS +H R H + C C F +L R H VHR
Sbjct: 60 CSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLER-HIEVHR 108
Score = 28.7 bits (61), Expect = 0.75
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 18 CPAAFTCKQYLEIH-NRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTGERPY 173
C +FT L+ H + H G + CD C +F K L H T ++ +
Sbjct: 243 CKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAH 295
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 57.2 bits (132), Expect = 2e-09
Identities = 26/75 (34%), Positives = 37/75 (49%)
Frame = +3
Query: 18 CPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTGERPYACDICQKR 197
C K +E H +TH +RPY+CD+C F + L H R H RPY C+ C KR
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 198 FAVKSYVTAHRWSHV 242
F + H+ ++
Sbjct: 509 FNRLDALNRHKQRNI 523
Score = 43.6 bits (98), Expect = 2e-05
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3
Query: 3 FQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKR 149
++C C A F L+ H R H RPY C+ CLKRF + LN HK+
Sbjct: 473 YRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRHKQ 520
Score = 35.1 bits (77), Expect = 0.009
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 269 CSMTFTSKSQFALHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVHRD 415
C+ K HI+TH + Y C +C FVR + ++ H R+H +
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVR-HHDLKRHLRIHEN 497
Score = 31.9 bits (69), Expect = 0.081
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = +2
Query: 260 CDRCSMTFTSKSQFALHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNR 403
CD C F H+R H G Y C C + F R L RH R
Sbjct: 475 CDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRHKQR 521
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 54.8 bits (126), Expect = 1e-08
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = +3
Query: 87 YQCDVCLKRFAQKSTLNIHKRTHTGERPYACDI--CQKRFAVKSYVTAHRWSH 239
Y+C CL+ F++ S+L IH +HTGERP+ CD C K F V+S + H+ H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 48.8 bits (111), Expect = 7e-07
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 3 FQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDV--CLKRFAQKSTLNIHKRTH 155
++C +C F+ L+IH +HTGERP+ CD C K F +S + H+R H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 51.2 bits (117), Expect = 1e-07
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 81 RPYQCDVCLKRFAQKSTLNIHKRTHTGERPYACDI--CQKRFAVKSYVTAHRWSH 239
RPY+C +C K F + H RTHTGE+P+ C C KRF+ +T H H
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Score = 47.6 bits (108), Expect = 2e-06
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 3 FQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDV--CLKRFAQKSTLNIHKRTHT 158
++C C AF ++ H RTHTGE+P+ C C KRF++ L H R HT
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 35.1 bits (77), Expect = 0.009
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +2
Query: 236 PRGGQALNCDRCSMTFTSKSQFALHIRTHAAGSCYECSV--CGRSFVRDSYLIRHHNRVH 409
P + C C+ F HIRTH + C+ C + F R L R H R+H
Sbjct: 20 PDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTR-HARIH 78
Query: 410 RDNHSNMSA 436
+ +S +A
Sbjct: 79 TNANSRRNA 87
Score = 28.7 bits (61), Expect = 0.75
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 165 RPYACDICQKRFAVKSYVTAHRWSHVADK 251
RPY C +C K F + T H +H +K
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEK 52
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 47.2 bits (107), Expect = 2e-06
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +3
Query: 3 FQCLQCPAAFTCKQYLEIHNRT-HTGERPYQCDVCLKRFAQKSTLNIHKRTHTGERP-YA 176
F C +C F ++L H R+ HT E+P+ C +C KRF+++ L H+R H P A
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPRLA 481
Query: 177 C 179
C
Sbjct: 482 C 482
Score = 40.7 bits (91), Expect = 2e-04
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 200 RREELCNGS*VVPR--GGQALNCDRCSMTFTSKSQFALHIRT-HAAGSCYECSVCGRSFV 370
+R + N VPR GG++ C CS F HIR+ H + + C +CG+ F
Sbjct: 403 KRRQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFS 461
Query: 371 RDSYLIRHHNRVH 409
R L R H R+H
Sbjct: 462 RRDNL-RQHERLH 473
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 46.4 bits (105), Expect = 4e-06
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 3 FQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDV--CLKRFAQKSTLNIHKRTH 155
++C C F +++ H R+HTGE+P++C C KRF ++ L H RTH
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 41.9 bits (94), Expect = 8e-05
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 81 RPYQCDVCLKRFAQKSTLNIHKRTHTGERPYACDI--CQKRFAVKSYVTAHRWSHV 242
+ Y+C C + F ++ H R+HTGE+P+ C C+KRF + + H +H+
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHL 57
Score = 35.1 bits (77), Expect = 0.009
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 248 QALNCDRCSMTFTSKSQFALHIRTHAAGSCYECSV--CGRSFVRDSYLIRH 394
++ C C F + HIR+H +ECS C + F R LIRH
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRH 52
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 45.2 bits (102), Expect = 8e-06
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3
Query: 18 CPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIH 143
CP +FT K++L H RTH + + C C + FA+ LN H
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRH 74
Score = 43.6 bits (98), Expect = 2e-05
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 269 CSMTFTSKSQFALHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVH 409
C +FT K H RTH + CS C R+F R L RH ++H
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMH 79
Score = 39.5 bits (88), Expect = 4e-04
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +3
Query: 27 AFTCKQYLEIHNRTHT-GERPYQCDV--CLKRFAQKSTLNIHKRTHTGERPYACDICQKR 197
+FT K L+ +R H G+ + C C K F +K L H+RTH + ++C C +
Sbjct: 6 SFTEKP-LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRA 64
Query: 198 FAVKSYVTAH 227
FA + H
Sbjct: 65 FARSDVLNRH 74
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 41.1 bits (92), Expect = 1e-04
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Frame = +2
Query: 260 CDRCSMTFTSKSQFALHIRTHAAGSCYECSV-------CGRSFVRDSYLIRHHNRVHRD 415
C+ C+ F HIR+H + CS CGR F R L+RH ++HR+
Sbjct: 72 CETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIHRN 130
Score = 37.9 bits (84), Expect = 0.001
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 81 RPYQCDVCLKRFAQKSTLNIHKRTHTGERPYAC 179
+ Y C+ C + FA+ L H R+HT E+P+ C
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
Score = 34.7 bits (76), Expect = 0.011
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Frame = +3
Query: 3 FQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDV-------CLKRFAQKSTLNIH-KRTHT 158
+ C C AF ++L+ H R+HT E+P+ C C ++F+++ L H ++ H
Sbjct: 70 YVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIHR 129
Query: 159 GERP 170
+P
Sbjct: 130 NPQP 133
Score = 25.0 bits (52), Expect = 9.3
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 165 RPYACDICQKRFAVKSYVTAHRWSHVADK 251
+ Y C+ C + FA ++ H SH +K
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEK 96
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 40.7 bits (91), Expect = 2e-04
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 257 NCDRCSMTFTSKSQFALHIRTHAAGSCYECSV--CGRSFVRDSYLIRHHNRVH 409
+C R M TS+ H+R+H + CSV C RSF R L +H VH
Sbjct: 79 DCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131
Score = 34.3 bits (75), Expect = 0.015
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +3
Query: 33 TCKQYLEIHNRTHTGERPYQCDV--CLKRFAQKSTLNIHKRT 152
T + L H R+HTGE+P+ C V C + F + L H RT
Sbjct: 88 TSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRT 129
Score = 33.9 bits (74), Expect = 0.020
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 10/70 (14%)
Frame = +3
Query: 69 HTGER--PYQC--DVCLKR-FAQKS--TLNIHKRTHTGERPYACDI--CQKRFAVKSYVT 221
H G R Y C D C ++ Q S L H R+HTGE+P+ C + C + F +
Sbjct: 65 HIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALA 124
Query: 222 AH-RWSHVAD 248
H R H AD
Sbjct: 125 KHMRTVHEAD 134
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 40.7 bits (91), Expect = 2e-04
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +2
Query: 269 CSMTFTSKSQFALHIRTHAAGSCYECSVCGRSFVRDSYLIRHHNRVH 409
C+ +FT K H R+H + C C SF R L RH N+ H
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70
Score = 36.3 bits (80), Expect = 0.004
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +3
Query: 75 GERPYQCDV--CLKRFAQKSTLNIHKRTHTGERPYACDICQKRFAVKSYVTAH 227
G+ Y+CD C K F +K H R+HT + + C C F + H
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
Score = 35.9 bits (79), Expect = 0.005
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 18 CPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIH 143
C +FT K++ H R+HT + + C C F + LN H
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 39.5 bits (88), Expect = 4e-04
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 78 ERPYQCDVCLKRFAQKSTLNIHKRTHTGERPYACDICQKRFAVKSYVTAH 227
+R + CD C KRF + L HK H+ P C C+ + K + H
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRH 77
Score = 31.9 bits (69), Expect = 0.081
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +3
Query: 3 FQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIH-KRTH 155
F C QC FT + L H H+ P C C + +K L H +R H
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
Score = 26.2 bits (55), Expect = 4.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 162 ERPYACDICQKRFAVKSYVTAHRWSH 239
+R + CD C KRF +T H+ H
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACH 53
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 31.1 bits (67), Expect = 0.14
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 81 RPYQCDVCLKRFAQKSTLNIHKRTHT 158
+PY+C+VC KR+ + L H RTH+
Sbjct: 397 KPYRCEVCSKRYKNLNGLKYH-RTHS 421
Score = 25.8 bits (54), Expect = 5.3
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 165 RPYACDICQKRFAVKSYVTAHR 230
+PY C++C KR+ + + HR
Sbjct: 397 KPYRCEVCSKRYKNLNGLKYHR 418
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 27.5 bits (58), Expect = 1.7
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = +2
Query: 188 PETVRREELCNGS*VVPRGGQALNCDRCSMTFTSKSQFALHIRTH 322
P T+ + N S CD+C M F +S H RT+
Sbjct: 117 PGTLNGTSVANASKQPNMPNATFRCDKCDMMFVKQSGLTNHKRTY 161
Score = 26.6 bits (56), Expect = 3.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 87 YQCDVCLKRFAQKSTLNIHKRTH 155
++CD C F ++S L HKRT+
Sbjct: 139 FRCDKCDMMFVKQSGLTNHKRTY 161
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 27.1 bits (57), Expect = 2.3
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +1
Query: 76 ANGLTNATSASSGSRKSQHSTYTNERTQVN 165
ANG+ N ++ G+ K+Q T TN++ +++
Sbjct: 480 ANGILNVSALEKGTGKTQKITITNDKGRLS 509
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 27.1 bits (57), Expect = 2.3
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +1
Query: 76 ANGLTNATSASSGSRKSQHSTYTNERTQVN 165
ANG+ N ++ G+ K+Q T TN++ +++
Sbjct: 480 ANGILNVSALEKGTGKTQKITITNDKGRLS 509
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 26.2 bits (55), Expect = 4.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 97 TSASSGSRKSQHSTYTNERTQVNVLTRVIFARNGSP 204
TS + R + N+RT+V + R+ +NG+P
Sbjct: 46 TSTKADRRNTAKQIQLNKRTEVAMNNRIFGGKNGAP 81
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 25.8 bits (54), Expect = 5.3
Identities = 9/36 (25%), Positives = 16/36 (44%)
Frame = +3
Query: 3 FQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLK 110
F C + TCK + ++ + CD+C+K
Sbjct: 171 FNCPEDACDITCKGWFDLKLHAKVKHHKFFCDLCVK 206
>SPCC1183.04c |pet127||mitochondrial membrane protein
Pet127|Schizosaccharomyces pombe|chr 3|||Manual
Length = 524
Score = 25.4 bits (53), Expect = 7.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 108 KRFAQKSTLNIHKRTHTGERPYACDICQKRFAVKSYVTAHRWSHVADK 251
K F ++S N+ K H G + +C+I + S +A +V DK
Sbjct: 7 KNFGRRSVYNLKKCLHKGFQINSCNIKAADNVLHSKASAFEKVNVVDK 54
>SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1466
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1
Query: 325 CVRADVECELGLGRERHRASVAVQGL 248
C RAD EC+ R + V V GL
Sbjct: 1276 CTRADFECDYNYRRLKDGTCVLVSGL 1301
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,049,855
Number of Sequences: 5004
Number of extensions: 36363
Number of successful extensions: 198
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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