Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0573
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   8.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.1  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.1  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.1  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 119 KNCLSLFFEIYCL 157
           KNC+ + FE+Y L
Sbjct: 256 KNCVIVIFELYYL 268


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 128 LSLFFEIYCLLITFAVH 178
           L   +  YC+ ITF VH
Sbjct: 53  LRRIYYFYCVSITFNVH 69


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 13/62 (20%), Positives = 23/62 (37%)
 Frame = +1

Query: 382 SSDPTGASXXXXXXXXXXXXCTALRHHADAGHAGRTSGPCAAAGDARGASHPADAASTGP 561
           SS P+G+S               +  +  A H    +   A    A G+  P+ +++   
Sbjct: 37  SSSPSGSSPQHSSSSASTSPAARMYPYVSAAHHHHQAAAAAFGAAASGSMVPSFSSTASS 96

Query: 562 AL 567
           AL
Sbjct: 97  AL 98


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 13/62 (20%), Positives = 23/62 (37%)
 Frame = +1

Query: 382 SSDPTGASXXXXXXXXXXXXCTALRHHADAGHAGRTSGPCAAAGDARGASHPADAASTGP 561
           SS P+G+S               +  +  A H    +   A    A G+  P+ +++   
Sbjct: 37  SSSPSGSSPQHSSSSASTSPAARMYPYVSAAHHHHQAAAAAFGAAASGSMVPSFSSTASS 96

Query: 562 AL 567
           AL
Sbjct: 97  AL 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,279
Number of Sequences: 336
Number of extensions: 2214
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)