Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0573
         (607 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_11775| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.33)          62   4e-10
SB_51628| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.00061)       36   0.034
SB_51627| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.017)         34   0.078
SB_28368| Best HMM Match : Pentaxin (HMM E-Value=9.5e-11)              33   0.18 
SB_56923| Best HMM Match : PT (HMM E-Value=0.95)                       28   5.1  

>SB_11775| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.33)
          Length = 666

 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 30/51 (58%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
 Frame = +2

Query: 389 TRQAPVA-GRDLPLIFIGGVPRSGTTLMRAMLDAHPDRALRQETRVVPRIL 538
           TR  P+    + PLIF+GG PRSGTTLMR MLD  PD    QETRV+P++L
Sbjct: 386 TRCTPLTHDENSPLIFVGGFPRSGTTLMRVMLDTLPDIRCGQETRVIPKLL 436


>SB_51628| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.00061)
          Length = 351

 Score = 35.5 bits (78), Expect = 0.034
 Identities = 16/34 (47%), Positives = 24/34 (70%)
 Frame = +2

Query: 425 LIFIGGVPRSGTTLMRAMLDAHPDRALRQETRVV 526
           LIFIG  PRSG TL+ +++DAHP+  +  E  ++
Sbjct: 95  LIFIG-YPRSGHTLVGSLIDAHPNAIIANELDII 127


>SB_51627| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.017)
          Length = 340

 Score = 34.3 bits (75), Expect = 0.078
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = +2

Query: 425 LIFIGGVPRSGTTLMRAMLDAHPDRALRQETRVV 526
           L+FIG  PRSG TL+ +++DAHP+  +  E  ++
Sbjct: 68  LMFIG-YPRSGHTLVGSLIDAHPNAIIANELDII 100


>SB_28368| Best HMM Match : Pentaxin (HMM E-Value=9.5e-11)
          Length = 1160

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +2

Query: 425 LIFIGGVPRSGTTLMRAMLDAHPDRALRQETRVV 526
           ++FIG  PRSG TL+ +++DAHP   +  E  ++
Sbjct: 873 VVFIG-YPRSGHTLVSSLIDAHPHAIIANEFDII 905


>SB_56923| Best HMM Match : PT (HMM E-Value=0.95)
          Length = 441

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 545 ASAGCEAPRASPAAAHGPDVRPA 477
           +SAG  +P  SP  +HGP + PA
Sbjct: 343 SSAGHPSPFPSPIGSHGPSISPA 365


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,388,202
Number of Sequences: 59808
Number of extensions: 261878
Number of successful extensions: 815
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)