Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0573
         (607 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132904-11|CAC35844.1|  380|Caenorhabditis elegans Hypothetical...    70   1e-12
AF049709-1|AAC36062.1|  380|Caenorhabditis elegans tyrosylprotei...    70   1e-12
AC024747-3|AAK85498.2|  318|Caenorhabditis elegans Hypothetical ...    30   1.1  
U00051-6|AAK70644.1|  259|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ...    29   2.6  
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related...    29   2.6  

>AL132904-11|CAC35844.1|  380|Caenorhabditis elegans Hypothetical
           protein Y111B2A.15 protein.
          Length = 380

 Score = 70.1 bits (164), Expect = 1e-12
 Identities = 32/44 (72%), Positives = 36/44 (81%)
 Frame = +2

Query: 413 RDLPLIFIGGVPRSGTTLMRAMLDAHPDRALRQETRVVPRILQM 544
           R  P IFIGGVPRSGTTLMRAMLDAHP+    +ETRV+PRIL +
Sbjct: 67  RTSPFIFIGGVPRSGTTLMRAMLDAHPEVRCGEETRVIPRILNL 110


>AF049709-1|AAC36062.1|  380|Caenorhabditis elegans tyrosylprotein
           sulfotransferase-A protein.
          Length = 380

 Score = 70.1 bits (164), Expect = 1e-12
 Identities = 32/44 (72%), Positives = 36/44 (81%)
 Frame = +2

Query: 413 RDLPLIFIGGVPRSGTTLMRAMLDAHPDRALRQETRVVPRILQM 544
           R  P IFIGGVPRSGTTLMRAMLDAHP+    +ETRV+PRIL +
Sbjct: 67  RTSPFIFIGGVPRSGTTLMRAMLDAHPEVRCGEETRVIPRILNL 110


>AC024747-3|AAK85498.2|  318|Caenorhabditis elegans Hypothetical
           protein Y110A2AM.1 protein.
          Length = 318

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -1

Query: 562 RAQCSRHLQDARHHARLLPQRTVRMCVQHGPHQRGAGARYTADEDERQVASGDWR 398
           RA+  R +Q+AR HAR    R  R+       +R    +   + D R+ A GD R
Sbjct: 128 RARRERIVQEARAHARRADARDARLEAAAAADRRERFLQEAQEADARRAADGDAR 182


>U00051-6|AAK70644.1|  259|Caenorhabditis elegans Hypothetical
           protein F42G9.8 protein.
          Length = 259

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 467 MRAMLDAHPDRALRQETRVVPRIL 538
           MRA+LDAHPD     ET ++P  L
Sbjct: 1   MRAILDAHPDVRCGGETMLLPSFL 24


>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
           repeats, ras-likedomain, kinase protein 1 protein.
          Length = 2395

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -1

Query: 604 RLRPAQDARFLS*ERAQCSRHLQDARHHARLLPQRTVRMCVQHGPH 467
           R  PA+  R  S    +  R L  +RHHA + PQ+    CV H  H
Sbjct: 809 RNSPARQHRSRSKSAVRSQRSLSVSRHHALIDPQKEEESCV-HKRH 853


>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
           kinase protein.
          Length = 2393

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -1

Query: 604 RLRPAQDARFLS*ERAQCSRHLQDARHHARLLPQRTVRMCVQHGPH 467
           R  PA+  R  S    +  R L  +RHHA + PQ+    CV H  H
Sbjct: 807 RNSPARQHRSRSKSAVRSQRSLSVSRHHALIDPQKEEESCV-HKRH 851


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,400,728
Number of Sequences: 27780
Number of extensions: 202352
Number of successful extensions: 567
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)