Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0570
         (659 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   2.8  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   3.7  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   4.9  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   4.9  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 461  DCDVFKNYVKCVRFKLNAK 405
            +CD+ KN   C+ F L AK
Sbjct: 1135 NCDLDKNQRNCIEFALKAK 1153


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 525 LARSGRTDTCSAHPQTGVSWS 587
           +  SG   T S HPQT  SW+
Sbjct: 185 MVASGAYGTMSMHPQTHHSWA 205


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -1

Query: 632  SNRSECVASRSDRRDGPRNARLRMRAARVGATAACQTVQTLGEGALVS 489
            S  +E   +    +D P  AR   R  +  A  A +  + LG+  LVS
Sbjct: 1030 STSAEAAVNAEQMQDDPAAARRAARNRQARARRAQERAEQLGDVELVS 1077


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 523 VWHAAVAPTRAARILRRAFR 582
           VWH A+      R+LRR  R
Sbjct: 869 VWHEAIGNQECCRLLRRVQR 888


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,572
Number of Sequences: 2352
Number of extensions: 13143
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)